FFCP PHASE1:Hg19::chr7:99809276..99809341,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10734 | |EntrezGene=10734 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11356 | |HGNC=11356 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000492674_5end | |association_with_transcript=0bp_to_ENST00000492674_5end | ||
|cluster_id=chr7:99809276..99809341,+ | |||
|coexpression_cluster_id=C342 | |||
|description=CAGE_peak_2_at_STAG3_5end | |description=CAGE_peak_2_at_STAG3_5end | ||
|id=chr7:99809276..99809341,+ | |id=chr7:99809276..99809341,+ | ||
|ontology_enrichment_celltype=CL:0000945!8.11e-46!24;CL:0000826!8.11e-46!24;CL:0000838!1.85e-41!52;CL:0000542!1.76e-40!53;CL:0000051!1.76e-40!53;CL:0000236!7.09e-28!14;CL:0002087!3.72e-20!119;CL:0002031!1.06e-17!124;CL:0000738!1.37e-17!140;CL:0000988!2.46e-13!182;CL:0000037!3.11e-12!172;CL:0000566!3.11e-12!172;CL:0002032!1.00e-10!165;CL:0000837!1.00e-10!165;CL:0000080!1.19e-08!6;CL:0000084!3.34e-08!25;CL:0000827!3.34e-08!25 | |ontology_enrichment_celltype=CL:0000945!8.11e-46!24;CL:0000826!8.11e-46!24;CL:0000838!1.85e-41!52;CL:0000542!1.76e-40!53;CL:0000051!1.76e-40!53;CL:0000236!7.09e-28!14;CL:0002087!3.72e-20!119;CL:0002031!1.06e-17!124;CL:0000738!1.37e-17!140;CL:0000988!2.46e-13!182;CL:0000037!3.11e-12!172;CL:0000566!3.11e-12!172;CL:0002032!1.00e-10!165;CL:0000837!1.00e-10!165;CL:0000080!1.19e-08!6;CL:0000084!3.34e-08!25;CL:0000827!3.34e-08!25 | ||
|ontology_enrichment_celltype_v019=CL:0000945;2.02e-91;24!CL:0000236;5.65e-55;13!CL:0000542;1.33e-34;53!CL:0002087;6.16e-08;104!CL:0000785;9.29e-07;1!CL:0000819;9.29e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.72e-91,24;CL:0000826,1.72e-91,24;CL:0000236,1.15e-59,14;CL:0000838,4.78e-52,52;CL:0000542,5.81e-51,53;CL:0000051,5.81e-51,53;CL:0002087,3.13e-24,115;CL:0002031,5.46e-23,120;CL:0000738,2.15e-21,136;CL:0000037,3.25e-16,168;CL:0002032,1.05e-15,161;CL:0000837,1.05e-15,161;CL:0000988,4.29e-15,177;CL:0000785,2.44e-11,2;CL:0000955,2.44e-11,2;CL:0000818,2.44e-11,2;CL:0000954,2.44e-11,2;CL:0000816,2.44e-11,2;CL:0000817,7.79e-08,3;CL:0000819,9.30e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000051;1.33e-34;53!CL:0000954;2.44e-11;2 | |||
|ontology_enrichment_disease=DOID:0060058!2.38e-14!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;4.84e-18;10!DOID:630;7.49e-07;1!DOID:0050177;7.49e-07;1!DOID:0050427;7.49e-07;1!DOID:0060073;9.29e-07;1!DOID:8675;9.29e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,5.14e-18,10;DOID:630,7.49e-07,1;DOID:0050177,7.49e-07,1;DOID:0050427,7.49e-07,1;DOID:0060073,9.30e-07,1;DOID:8675,9.30e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!1.21e-15!7;UBERON:0000178!3.52e-10!15;UBERON:0000179!3.52e-10!15;UBERON:0000463!3.52e-10!15;UBERON:0002370!7.58e-10!4;UBERON:0005058!7.58e-10!4;UBERON:0009113!7.58e-10!4;UBERON:0003295!7.58e-10!4;UBERON:0005562!7.58e-10!4;UBERON:0002106!1.78e-07!3;UBERON:0004854!1.78e-07!3;UBERON:0009034!1.78e-07!3;UBERON:0002095!1.78e-07!3;UBERON:0004782!1.78e-07!3;UBERON:0003281!1.78e-07!3;UBERON:0009664!1.78e-07!3;UBERON:0002296!1.78e-07!3;UBERON:0005602!1.78e-07!3;UBERON:0001179!1.78e-07!3;UBERON:0006293!1.78e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.78e-11;2!UBERON:0005058;3.78e-11;2!UBERON:0009113;3.78e-11;2!UBERON:0004177;1.28e-09;5!UBERON:0005057;1.28e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.10e-11,4;UBERON:0005058,1.10e-11,4;UBERON:0009113,1.10e-11,4;UBERON:0003295,1.10e-11,4;UBERON:0005562,1.10e-11,4;UBERON:0004177,1.72e-11,7;UBERON:0005057,1.72e-11,7;UBERON:0001042,4.57e-08,10;UBERON:0009145,4.57e-08,10;UBERON:0003351,6.04e-08,6;UBERON:0006562,2.43e-07,11;UBERON:0000029,9.81e-07,1 | |||
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| ||
|short_description=p2@STAG3 | |short_description=p2@STAG3 | ||
}} | }} |
Latest revision as of 18:02, 24 September 2015
Short description: | p2@STAG3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_STAG3_5end |
Coexpression cluster: | C342_xeroderma_b_B_splenic_plasma_Burkitt_thymus |
Association with transcript: | 0bp_to_ENST00000492674_5end |
EntrezGene: | STAG3 |
HGNC: | 11356 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.72e-91 | 24 |
pro-B cell | 1.72e-91 | 24 |
B cell | 1.15e-59 | 14 |
lymphoid lineage restricted progenitor cell | 4.78e-52 | 52 |
lymphocyte | 5.81e-51 | 53 |
common lymphoid progenitor | 5.81e-51 | 53 |
nongranular leukocyte | 3.13e-24 | 115 |
hematopoietic lineage restricted progenitor cell | 5.46e-23 | 120 |
leukocyte | 2.15e-21 | 136 |
hematopoietic stem cell | 3.25e-16 | 168 |
hematopoietic oligopotent progenitor cell | 1.05e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.05e-15 | 161 |
hematopoietic cell | 4.29e-15 | 177 |
mature B cell | 2.44e-11 | 2 |
pre-B-II cell | 2.44e-11 | 2 |
transitional stage B cell | 2.44e-11 | 2 |
small pre-B-II cell | 2.44e-11 | 2 |
immature B cell | 2.44e-11 | 2 |
precursor B cell | 7.79e-08 | 3 |
B-1 B cell | 9.30e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.10e-11 | 4 |
hemolymphoid system gland | 1.10e-11 | 4 |
thymic region | 1.10e-11 | 4 |
pharyngeal gland | 1.10e-11 | 4 |
thymus primordium | 1.10e-11 | 4 |
hemopoietic organ | 1.72e-11 | 7 |
immune organ | 1.72e-11 | 7 |
chordate pharynx | 4.57e-08 | 10 |
pharyngeal region of foregut | 4.57e-08 | 10 |
pharyngeal epithelium | 6.04e-08 | 6 |
pharynx | 2.43e-07 | 11 |
lymph node | 9.81e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 5.14e-18 | 10 |
genetic disease | 7.49e-07 | 1 |
monogenic disease | 7.49e-07 | 1 |
xeroderma pigmentosum | 7.49e-07 | 1 |
lymphatic system cancer | 9.30e-07 | 1 |
lymphosarcoma | 9.30e-07 | 1 |