FFCP PHASE1:Hg19::chr3:129513355..129513392,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:129513355..129513392,- to FFCP PHASE1:Hg19::chr3:129513355..129513392,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23023 | |EntrezGene=23023 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29116 | |HGNC=29116 | ||
|TSSclassifier=strong | |||
|UniProt=O94876 | |UniProt=O94876 | ||
|association_with_transcript=-96bp_to_ENST00000329333,uc011blc.1_5end | |||
|cluster_id=chr3:129513355..129513392,- | |||
|coexpression_cluster_id=C4282 | |||
|description=CAGE_peak_6_at_TMCC1_5end | |||
|id=chr3:129513355..129513392,- | |||
|ontology_enrichment_celltype=CL:0000066!7.50e-41!254;CL:0002076!1.59e-19!43;CL:0000076!4.04e-17!62;CL:0000220!2.59e-15!246;CL:0002321!6.45e-15!248;CL:0000223!1.62e-11!59;CL:0002368!2.83e-10!13;CL:0002139!1.44e-08!24;CL:0000213!1.67e-08!57;CL:0000215!1.67e-08!57;CL:0002078!4.46e-07!44;CL:0002202!8.38e-07!9;CL:0002632!8.38e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002368;2.00e-19;13!CL:0002076;6.37e-14;42!CL:0002202;1.54e-12;9!CL:0002632;1.54e-12;9!CL:0002159;6.32e-09;14!CL:0002138;8.17e-08;6!CL:0002166;1.48e-07;3!CL:0002621;1.75e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.91e-37,253;CL:0002368,1.79e-19,13;CL:0002076,2.02e-18,42;CL:0002321,2.33e-15,250;CL:0000223,1.27e-12,58;CL:0002202,1.50e-12,9;CL:0002632,1.50e-12,9;CL:0000076,2.59e-11,63;CL:0002159,6.49e-09,14;CL:0005020,6.13e-08,6;CL:0002138,6.13e-08,6;CL:0005022,6.13e-08,6;CL:0002166,1.49e-07,3;CL:0002621,1.73e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;6.41e-08;58!CL:0005022;8.17e-08;6 | |||
|ontology_enrichment_disease=DOID:305!3.84e-08!106;DOID:1749!2.30e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000467!2.44e-10!625;UBERON:0000480!3.16e-10!626;UBERON:0001004!5.01e-10!72;UBERON:0000064!8.95e-10!219;UBERON:0000065!1.05e-09!53;UBERON:0004119!2.40e-09!169;UBERON:0000925!2.40e-09!169;UBERON:0006595!2.40e-09!169;UBERON:0000468!1.39e-08!659;UBERON:0003100!3.77e-08!41;UBERON:0000464!5.09e-08!104;UBERON:0008947!5.38e-08!38;UBERON:0003258!5.38e-08!38;UBERON:0005795!2.36e-07!22;UBERON:0005631!2.61e-07!14;UBERON:0000158!2.61e-07!14;UBERON:0000483!3.85e-07!309;UBERON:0000995!5.36e-07!21;UBERON:0003134!7.20e-07!37;UBERON:0000474!7.20e-07!37;UBERON:0000119!8.12e-07!312;UBERON:0004111!9.83e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0004807;2.01e-10;22!UBERON:0005911;1.43e-08;36!UBERON:0000486;4.59e-08;12!UBERON:0001949;1.75e-07;3!UBERON:0000365;3.40e-07;5!UBERON:0007196;6.74e-07;15!UBERON:0001558;6.74e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005153,2.83e-09,37;UBERON:0005911,3.12e-08,82;UBERON:0004807,1.17e-07,28;UBERON:0001949,1.73e-07,3;UBERON:0000365,3.15e-07,5;UBERON:0005631,3.89e-07,14;UBERON:0000158,3.89e-07,14;UBERON:0007196,6.64e-07,15;UBERON:0001558,6.64e-07,15;UBERON:0004119,6.80e-07,160;UBERON:0000925,6.80e-07,160;UBERON:0006595,6.80e-07,160;UBERON:0000065,7.05e-07,54 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,2.7030733015166,2.09340350391728,5.02415155899396,2.37390280405608,0,0,0.672325146451775,0,0,0.487932798790507,0,0,0,2.0036519099174,2.18999080116615,1.38096903554283,0,0,0,0,0,0,3.67768489791571,2.409647350226,2.21852406100073,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,1.10864698731282,0.087834785693126,0.589405839739707,0,0.370784442784429,0,0,0,0,0,0,1.78886166630035,0,0.347140501607594,0.56530794192401,0,0,0.835979866147242,1.8089173141853,2.13459757612026,5.35552980423472,3.62546385398232,6.84244895146661,1.22031028774085,0.367663080345869,0.81014194788176,0.17859945656816,0.22452937262617,0,0,0.949265659568129,0.366403487860815,0,0,2.18047026071267,0,0.506522046658319,0,0,0,0,0,0.49333509683432,0,0.134710672069688,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.538168907066586,0.213557388818567,0,0,0,0,0,0,0.194874010322397,0,0,0,0,0.10075209822764,0,10.6293469239813,11.4553370648151,4.58887352622406,0,0,0,0,0,0,0,0,0,0,0,0.591534000199219,0.168584690078102,0,0.772057809126758,0,0.237270619111097,0.134831308160164,0.196221465125346,0.769494313892781,0,0,0,0,0,0,0,0,0.245976877086227,1.02940686179115,9.65802511595905,3.37205259772859,5.83068039987459,0.648119116109707,0,0,0,0.231860809950154,0,3.75352764178792,1.38895653772983,0.951270761172991,0,0,0,0,0,9.3733833986777,10.4148919483293,7.23052995936171,3.22410681730254,1.45316969256981,3.4504441124869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,1.74306691720059,1.49959486773086,0,0,0,0,0,0,0.579125226670317,0,1.25342674267927,0,0,0,0,0,1.30139853857622,1.54657762555539,1.00509759200609,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,1.66435439510497,1.20956117331872,0,0.920771839728375,0,0,0,0,0,0,0,0,0,0,0.241718899183244,6.81721999031168,1.74953878978203,0,0,0,0.451199612907412,4.92898157468254,0.784349769176855,1.46139224653261,3.9054102690364,0,0.170093705276516,0.215915916102139,0,0,0.501689773854853,0.764628819135115,0.831076008928724,1.34324852833307,0,0,1.02580050046556,0.328014645699706,0.976135183992909,0.721287081534056,0,0,10.3367796839311,9.1008434445113,0,0,0,0,0,0,0,0.0852266274161009,0.979352392114111,3.63626813794152,9.03293316615999,14.9306873618663,1.51736671283325,0,0,0.6970372701606,0,0,1.73986598415015,0.18532421910392,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0.404364963146632,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0,0,0,0,0,2.30933070541229,6.03272047982209,1.08890984861323,0.659006605437454,3.87454835404107,0,3.54744122829341,8.27004240745054,0,0,0,0,0,0,0,0,0,0.962479855263359,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,3.81991175580304,0,0.307160702099232,0.994147647766298,0,0,0,0,0,0,0,2.24991101504741,0,0,4.40354920621902,1.25314822272926,0,0,0,0,0,0,0,0,0,0,0,1.5255219017566,0.236387681767936,0,0,0.173624994933292,0,0,0,0,0,0,0,1.81250867562184,0.384751292518985,0,0,0,0,1.5950057986596,0.641183153813036,1.5991043280559,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91821828489147,0.189559738885464,0,0,0.664653872707185,0,0,0,0.569219092059585,1.52542140314453,0.347119476670262,1.56787835863004,3.04707223031409,0,6.36348320144981,0.19351266257817,0,0.0821154570532092,0.872901148395775,0,0,0.822251547880505,0,0,1.56441106187842,1.44285876452761,0.213452994739353,0.39961921916426,0,0.229073192331831,0,1.7286575758578,0,0.235694034616795,3.80531777006119,6.48537647136466,0,0,0,0,0,0.859530882839914,0,0,0.229160424011684,0,0.199679000498991,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0.0788057072991982,0.0524545881349981,0.633602019116439,0,5.37362552494447,0,0,0,0,1.72844298240254,0.326587360109409,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0.747511887973863,0.78602152549833,0.414239055347196,0,0,0,6.38341257770182,0.544017803369474,0,0.306345576763462,0,0,0,0.244052529803926,0,0,0,0.124192805882767,0,0.624902039810533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03498604992744,0.63718706865481,0.449803112163605,0,0.414706207840855,0,0,0,0.380805212168795,0,0,0.644463342254931,0,1.19428766609585,0.800055529326307,0,0,0,1.15571898244382,3.43106546199881,0,2.04035332961045,0.231522474323834,0.244736704506468,0.537266523244462,2.77921302444875,0.877136198314828,0.176689145945881,3.27953865060555,1.18259708457151,0.256241518587947,0,0,0,0.194860308839388,0,0,0,0.491545817507439,1.47918486351039,0,0,0,0,0,1.11903606175556,5.59869534029676,0,0.107824811396682,0,0,0,0,0,0,0,0,1.60114149657094,0.352675943690684,0,0.0642292250964595,0,0.319267718114302,0,0.756215088665154,0,0,0,0.490738592505128,0.589848616738702,0.550285795565037,0.346576998451015,0,0,0,0,0,0,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| ||
|short_description=p6@TMCC1 | |||
}} | }} |
Latest revision as of 18:16, 24 September 2015
Short description: | p6@TMCC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TMCC1_5end |
Coexpression cluster: | C4282_Mallassezderived_Small_Gingival_Urothelial_papillotubular_Sebocyte_transitionalcell |
Association with transcript: | -96bp_to_ENST00000329333, uc011blc.1_5end |
EntrezGene: | TMCC1 |
HGNC: | 29116 |
UniProt: | O94876 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.91e-37 | 253 |
respiratory epithelial cell | 1.79e-19 | 13 |
endo-epithelial cell | 2.02e-18 | 42 |
embryonic cell | 2.33e-15 | 250 |
endodermal cell | 1.27e-12 | 58 |
epithelial cell of tracheobronchial tree | 1.50e-12 | 9 |
epithelial cell of lower respiratory tract | 1.50e-12 | 9 |
squamous epithelial cell | 2.59e-11 | 63 |
general ecto-epithelial cell | 6.49e-09 | 14 |
lymphangioblast | 6.13e-08 | 6 |
endothelial cell of lymphatic vessel | 6.13e-08 | 6 |
vascular lymphangioblast | 6.13e-08 | 6 |
epithelial cell of Malassez | 1.49e-07 | 3 |
gingival epithelial cell | 1.73e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelial bud | 2.83e-09 | 37 |
endo-epithelium | 3.12e-08 | 82 |
respiratory system epithelium | 1.17e-07 | 28 |
gingival epithelium | 1.73e-07 | 3 |
urothelium | 3.15e-07 | 5 |
extraembryonic membrane | 3.89e-07 | 14 |
membranous layer | 3.89e-07 | 14 |
tracheobronchial tree | 6.64e-07 | 15 |
lower respiratory tract | 6.64e-07 | 15 |
endoderm-derived structure | 6.80e-07 | 160 |
endoderm | 6.80e-07 | 160 |
presumptive endoderm | 6.80e-07 | 160 |
respiratory tract | 7.05e-07 | 54 |