FFCP PHASE1:Hg19::chr14:58332663..58332678,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=341880 | |EntrezGene=341880 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19845 | |HGNC=19845 | ||
|TSSclassifier=strong | |||
|UniProt=A4IF30 | |UniProt=A4IF30 | ||
|association_with_transcript=-71bp_to_NM_001206920_5end | |||
|cluster_id=chr14:58332663..58332678,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_3_at_SLC35F4_5end | |||
|id=chr14:58332663..58332678,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.28e-85;3!UBERON:0007123;6.21e-07;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;2.35e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,2.11e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.24e-47!57;UBERON:0005068!1.24e-47!57;UBERON:0006241!1.24e-47!57;UBERON:0007135!1.24e-47!57;UBERON:0005743!1.39e-43!86;UBERON:0001017!2.60e-43!82;UBERON:0002616!4.22e-39!59;UBERON:0000073!1.07e-38!94;UBERON:0001016!1.07e-38!94;UBERON:0000955!2.17e-34!69;UBERON:0006238!2.17e-34!69;UBERON:0003075!1.02e-33!86;UBERON:0007284!1.02e-33!86;UBERON:0002346!7.13e-32!90;UBERON:0007023!1.07e-30!115;UBERON:0002020!1.16e-27!34;UBERON:0003528!1.16e-27!34;UBERON:0002780!1.36e-27!41;UBERON:0001890!1.36e-27!41;UBERON:0006240!1.36e-27!41;UBERON:0001893!3.39e-27!34;UBERON:0003080!7.80e-27!42;UBERON:0001869!6.41e-26!32;UBERON:0002791!6.42e-25!33;UBERON:0003076!1.27e-23!15;UBERON:0003057!1.27e-23!15;UBERON:0002619!1.69e-22!22;UBERON:0001950!5.31e-21!20;UBERON:0000153!1.43e-19!129;UBERON:0007811!1.43e-19!129;UBERON:0000956!1.48e-19!25;UBERON:0000203!1.48e-19!25;UBERON:0000033!2.99e-19!123;UBERON:0004733!3.17e-19!12;UBERON:0002028!3.17e-19!12;UBERON:0007277!3.17e-19!12;UBERON:0003056!4.67e-19!61;UBERON:0004121!6.33e-18!169;UBERON:0004732!1.24e-17!13;UBERON:0000924!2.56e-17!173;UBERON:0006601!2.56e-17!173;UBERON:0002680!5.19e-15!9;UBERON:0001895!5.19e-15!9;UBERON:0010092!5.19e-15!9;UBERON:0000025!1.18e-12!194;UBERON:0000988!4.67e-12!3;UBERON:0002298!1.39e-11!8;UBERON:0002308!1.33e-09!9;UBERON:0000125!1.33e-09!9;UBERON:0004111!1.88e-09!241;UBERON:0000200!4.50e-09!6;UBERON:0000477!9.16e-09!286;UBERON:0002148!1.61e-08!2;UBERON:0009662!1.61e-08!2;UBERON:0000369!3.68e-08!4;UBERON:0002435!3.68e-08!4;UBERON:0000204!3.68e-08!4;UBERON:0010082!3.68e-08!4;UBERON:0000483!3.97e-08!309;UBERON:0000119!5.76e-08!312;UBERON:0001871!4.27e-07!7;UBERON:0000349!5.25e-07!5;UBERON:0001872!6.86e-07!5;UBERON:0002021!7.01e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;3.16e-43;6!UBERON:0002680;3.84e-29;9!UBERON:0001895;3.84e-29;9!UBERON:0004733;4.42e-22;12!UBERON:0002028;4.42e-22;12!UBERON:0004732;1.90e-20;13!UBERON:0000341;2.21e-15;2!UBERON:0002046;6.21e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,3.16e-43,6;UBERON:0006215,3.16e-43,6;UBERON:0002680,3.84e-29,9;UBERON:0001895,3.84e-29,9;UBERON:0010092,3.84e-29,9;UBERON:0004733,4.42e-22,12;UBERON:0002028,4.42e-22,12;UBERON:0007277,4.42e-22,12;UBERON:0004732,1.90e-20,13;UBERON:0003076,7.82e-18,15;UBERON:0003057,7.82e-18,15;UBERON:0000341,2.37e-15,2;UBERON:0002046,6.77e-07,5;UBERON:0004117,6.77e-07,5;UBERON:0007689,6.77e-07,5;UBERON:0007123,6.77e-07,5;UBERON:0003091,6.77e-07,5 | |||
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| ||
|short_description=p3@SLC35F4 | |||
}} | }} |
Latest revision as of 18:21, 24 September 2015
Short description: | p3@SLC35F4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC35F4_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -71bp_to_NM_001206920_5end |
EntrezGene: | SLC35F4 |
HGNC: | 19845 |
UniProt: | A4IF30 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 3.16e-43 | 6 |
rhombic lip | 3.16e-43 | 6 |
regional part of metencephalon | 3.84e-29 | 9 |
metencephalon | 3.84e-29 | 9 |
future metencephalon | 3.84e-29 | 9 |
segmental subdivision of hindbrain | 4.42e-22 | 12 |
hindbrain | 4.42e-22 | 12 |
presumptive hindbrain | 4.42e-22 | 12 |
segmental subdivision of nervous system | 1.90e-20 | 13 |
posterior neural tube | 7.82e-18 | 15 |
chordal neural plate | 7.82e-18 | 15 |
throat | 2.37e-15 | 2 |
thyroid gland | 6.77e-07 | 5 |
pharyngeal pouch | 6.77e-07 | 5 |
thyroid diverticulum | 6.77e-07 | 5 |
pharyngeal pouch 2 | 6.77e-07 | 5 |
thyroid primordium | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 2.11e-08 | 4 |