FFCP PHASE1:Hg19::chr2:219849897..219849928,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:219849897..219849928,-
|short_description=p2@FEV
|description=CAGE_peak_2_at_FEV_5end
|association_with_transcript=450bp_to_ENST00000295727,NM_017521,uc002...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54738 | |EntrezGene=54738 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18562 | |HGNC=18562 | ||
|TSSclassifier=strong | |||
|UniProt=Q99581 | |UniProt=Q99581 | ||
|association_with_transcript=450bp_to_ENST00000295727,NM_017521,uc002vji.1_5end | |||
|cluster_id=chr2:219849897..219849928,- | |||
|coexpression_cluster_id=C76 | |||
|description=CAGE_peak_2_at_FEV_5end | |||
|id=chr2:219849897..219849928,- | |||
|ontology_enrichment_celltype=CL:0000242!1.36e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0000123;2.86e-19;2!CL:0000242;2.86e-19;2!CL:0000333;2.53e-17;5!CL:0002553;1.50e-10;1!CL:0000312;2.94e-08;5!CL:0000240;5.10e-07;6!CL:0000311;5.10e-07;6!CL:0000079;5.10e-07;6!CL:0000237;5.10e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.61e-19,2;CL:0002553,1.57e-10,1;CL:0000312,2.83e-08,5;CL:0000240,4.95e-07,6;CL:0000311,4.95e-07,6;CL:0000079,4.95e-07,6;CL:0000237,4.95e-07,6;CL:0000036,4.95e-07,6;CL:0000357,4.95e-07,6;CL:0000114,4.95e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000357;5.10e-07;6!CL:0000114;5.10e-07;6 | |||
|ontology_enrichment_disease=DOID:1036!2.12e-12!8;DOID:171!2.12e-10!10;DOID:8692!4.11e-09!31;DOID:1240!1.42e-08!39;DOID:169!4.88e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:171;6.46e-15;10!DOID:169;1.55e-14;6!DOID:3095;2.79e-10;22!DOID:2994;2.79e-10;22!DOID:1240;6.53e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:171,6.23e-15,10;DOID:169,1.59e-14,6;DOID:3095,2.77e-10,22;DOID:2994,2.77e-10,22;DOID:162,1.98e-08,235;DOID:14566,3.40e-08,239;DOID:1240,4.95e-08,39;DOID:8692,2.44e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002298!1.67e-17!8;UBERON:0001049!3.69e-17!57;UBERON:0005068!3.69e-17!57;UBERON:0006241!3.69e-17!57;UBERON:0007135!3.69e-17!57;UBERON:0002616!1.90e-16!59;UBERON:0000955!5.09e-15!69;UBERON:0006238!5.09e-15!69;UBERON:0000073!3.62e-14!94;UBERON:0001016!3.62e-14!94;UBERON:0002346!1.12e-13!90;UBERON:0000988!7.03e-13!3;UBERON:0001896!2.07e-12!3;UBERON:0005290!2.07e-12!3;UBERON:0010096!2.07e-12!3;UBERON:0001017!5.12e-12!82;UBERON:0004733!1.85e-11!12;UBERON:0002028!1.85e-11!12;UBERON:0007277!1.85e-11!12;UBERON:0003075!1.87e-11!86;UBERON:0007284!1.87e-11!86;UBERON:0005743!2.83e-11!86;UBERON:0002020!4.43e-11!34;UBERON:0003528!4.43e-11!34;UBERON:0001893!8.28e-11!34;UBERON:0004732!1.58e-10!13;UBERON:0002780!1.86e-10!41;UBERON:0001890!1.86e-10!41;UBERON:0006240!1.86e-10!41;UBERON:0003080!3.70e-10!42;UBERON:0000200!4.52e-10!6;UBERON:0001869!1.52e-09!32;UBERON:0002148!2.53e-09!2;UBERON:0009662!2.53e-09!2;UBERON:0002791!3.14e-09!33;UBERON:0003076!4.88e-09!15;UBERON:0003057!4.88e-09!15;UBERON:0000924!6.15e-09!173;UBERON:0006601!6.15e-09!173;UBERON:0007023!1.25e-08!115;UBERON:0000013!2.23e-08!5;UBERON:0002410!2.23e-08!5;UBERON:0001950!6.21e-08!20;UBERON:0001871!6.58e-08!7;UBERON:0003056!1.38e-07!61;UBERON:0004121!1.76e-07!169;UBERON:0002308!3.03e-07!9;UBERON:0000125!3.03e-07!9;UBERON:0002619!3.64e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002148;1.23e-18;2!UBERON:0006331;1.23e-18;2!UBERON:0009662;1.23e-18;2!UBERON:0000013;2.53e-17;5!UBERON:0002410;2.53e-17;5!UBERON:0000988;9.42e-13;3!UBERON:0000010;7.20e-10;8!UBERON:0002108;5.22e-08;4!UBERON:0002298;8.22e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002148,1.03e-18,2;UBERON:0006331,1.03e-18,2;UBERON:0009662,1.03e-18,2;UBERON:0000013,2.60e-17,5;UBERON:0002410,2.60e-17,5;UBERON:0000988,8.35e-13,3;UBERON:0000010,7.31e-10,8;UBERON:0002108,6.24e-08,4;UBERON:0002298,7.75e-07,6 | |||
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| ||
|short_description=p2@FEV | |||
}} | }} |
Latest revision as of 19:10, 24 September 2015
Short description: | p2@FEV |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FEV_5end |
Coexpression cluster: | C76_argyrophil_gastrointestinal_temporal_duodenum_neuroblastoma_merkel_smallcell |
Association with transcript: | 450bp_to_ENST00000295727, NM_017521, uc002vji.1_5end |
EntrezGene: | FEV |
HGNC: | 18562 |
UniProt: | Q99581 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.61e-19 | 2 |
lung fibroblast | 1.57e-10 | 1 |
keratinocyte | 2.83e-08 | 5 |
stratified squamous epithelial cell | 4.95e-07 | 6 |
keratin accumulating cell | 4.95e-07 | 6 |
stratified epithelial cell | 4.95e-07 | 6 |
keratinizing barrier epithelial cell | 4.95e-07 | 6 |
epithelial fate stem cell | 4.95e-07 | 6 |
stratified epithelial stem cell | 4.95e-07 | 6 |
surface ectodermal cell | 4.95e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
locus ceruleus | 1.03e-18 | 2 |
brainstem nucleus | 1.03e-18 | 2 |
hindbrain nucleus | 1.03e-18 | 2 |
sympathetic nervous system | 2.60e-17 | 5 |
autonomic nervous system | 2.60e-17 | 5 |
pons | 8.35e-13 | 3 |
peripheral nervous system | 7.31e-10 | 8 |
small intestine | 6.24e-08 | 4 |
brainstem | 7.75e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 6.23e-15 | 10 |
neuroendocrine tumor | 1.59e-14 | 6 |
germ cell and embryonal cancer | 2.77e-10 | 22 |
germ cell cancer | 2.77e-10 | 22 |
cancer | 1.98e-08 | 235 |
disease of cellular proliferation | 3.40e-08 | 239 |
leukemia | 4.95e-08 | 39 |
myeloid leukemia | 2.44e-07 | 31 |