FFCP PHASE1:Hg19::chr2:219849897..219849928,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=54738 | |EntrezGene=54738 | ||
Line 8: | Line 8: | ||
|UniProt=Q99581 | |UniProt=Q99581 | ||
|association_with_transcript=450bp_to_ENST00000295727,NM_017521,uc002vji.1_5end | |association_with_transcript=450bp_to_ENST00000295727,NM_017521,uc002vji.1_5end | ||
|cluster_id=chr2:219849897..219849928,- | |||
|coexpression_cluster_id=C76 | |coexpression_cluster_id=C76 | ||
|description=CAGE_peak_2_at_FEV_5end | |description=CAGE_peak_2_at_FEV_5end |
Latest revision as of 19:10, 24 September 2015
Short description: | p2@FEV |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FEV_5end |
Coexpression cluster: | C76_argyrophil_gastrointestinal_temporal_duodenum_neuroblastoma_merkel_smallcell |
Association with transcript: | 450bp_to_ENST00000295727, NM_017521, uc002vji.1_5end |
EntrezGene: | FEV |
HGNC: | 18562 |
UniProt: | Q99581 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@FEV |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.61e-19 | 2 |
lung fibroblast | 1.57e-10 | 1 |
keratinocyte | 2.83e-08 | 5 |
stratified squamous epithelial cell | 4.95e-07 | 6 |
keratin accumulating cell | 4.95e-07 | 6 |
stratified epithelial cell | 4.95e-07 | 6 |
keratinizing barrier epithelial cell | 4.95e-07 | 6 |
epithelial fate stem cell | 4.95e-07 | 6 |
stratified epithelial stem cell | 4.95e-07 | 6 |
surface ectodermal cell | 4.95e-07 | 6 |
Showing 1 to 10 of 10 entries
Ontology term | p-value | n |
---|---|---|
locus ceruleus | 1.03e-18 | 2 |
brainstem nucleus | 1.03e-18 | 2 |
hindbrain nucleus | 1.03e-18 | 2 |
sympathetic nervous system | 2.60e-17 | 5 |
autonomic nervous system | 2.60e-17 | 5 |
pons | 8.35e-13 | 3 |
peripheral nervous system | 7.31e-10 | 8 |
small intestine | 6.24e-08 | 4 |
brainstem | 7.75e-07 | 6 |
Showing 1 to 9 of 9 entries
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 6.23e-15 | 10 |
neuroendocrine tumor | 1.59e-14 | 6 |
germ cell and embryonal cancer | 2.77e-10 | 22 |
germ cell cancer | 2.77e-10 | 22 |
cancer | 1.98e-08 | 235 |
disease of cellular proliferation | 3.40e-08 | 239 |
leukemia | 4.95e-08 | 39 |
myeloid leukemia | 2.44e-07 | 31 |
Showing 1 to 8 of 8 entries