FFCP PHASE1:Hg19::chr4:114682597..114682608,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=817 | |EntrezGene=817 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1462 | |HGNC=1462 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000394524,ENST00000505132_5end | |association_with_transcript=0bp_to_ENST00000394524,ENST00000505132_5end | ||
|cluster_id=chr4:114682597..114682608,- | |||
|description=CAGE_peak_7_at_CAMK2D_5end | |description=CAGE_peak_7_at_CAMK2D_5end | ||
|id=chr4:114682597..114682608,- | |id=chr4:114682597..114682608,- | ||
|ontology_enrichment_celltype=CL:0000057!2.32e-10!75;CL:0000055!3.44e-09!180;CL:0000048!7.64e-07!430 | |ontology_enrichment_celltype=CL:0000057!2.32e-10!75;CL:0000055!3.44e-09!180;CL:0000048!7.64e-07!430 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.08e-09,76;CL:0000048,7.91e-09,427;CL:0000723,1.73e-08,433;CL:0000034,1.32e-07,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!3.78e-11!659;UBERON:0000467!5.30e-10!625;UBERON:0000480!7.00e-10!626;UBERON:0007023!1.26e-09!115;UBERON:0002204!7.24e-09!167;UBERON:0000914!2.84e-08!83;UBERON:0002329!2.84e-08!83;UBERON:0003077!2.84e-08!83;UBERON:0003059!2.84e-08!83;UBERON:0007282!2.84e-08!83;UBERON:0009618!2.84e-08!83;UBERON:0007285!2.84e-08!83;UBERON:0000062!5.96e-08!511;UBERON:0002385!2.49e-07!63;UBERON:0001015!2.49e-07!63;UBERON:0000383!2.49e-07!63;UBERON:0000481!3.59e-07!347;UBERON:0000479!4.98e-07!787;UBERON:0004290!8.60e-07!70 | |ontology_enrichment_uberon=UBERON:0000468!3.78e-11!659;UBERON:0000467!5.30e-10!625;UBERON:0000480!7.00e-10!626;UBERON:0007023!1.26e-09!115;UBERON:0002204!7.24e-09!167;UBERON:0000914!2.84e-08!83;UBERON:0002329!2.84e-08!83;UBERON:0003077!2.84e-08!83;UBERON:0003059!2.84e-08!83;UBERON:0007282!2.84e-08!83;UBERON:0009618!2.84e-08!83;UBERON:0007285!2.84e-08!83;UBERON:0000062!5.96e-08!511;UBERON:0002385!2.49e-07!63;UBERON:0001015!2.49e-07!63;UBERON:0000383!2.49e-07!63;UBERON:0000481!3.59e-07!347;UBERON:0000479!4.98e-07!787;UBERON:0004290!8.60e-07!70 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.73e-11,167;UBERON:0000926,4.73e-08,315;UBERON:0004120,4.73e-08,315;UBERON:0006603,4.73e-08,315;UBERON:0002385,5.54e-08,64;UBERON:0001015,5.54e-08,64;UBERON:0000383,5.54e-08,64;UBERON:0000479,1.95e-07,773;UBERON:0001134,4.52e-07,62;UBERON:0002036,4.52e-07,62;UBERON:0003082,4.52e-07,62;UBERON:0002329,5.27e-07,71;UBERON:0003059,5.27e-07,71;UBERON:0007282,5.27e-07,71;UBERON:0004290,5.27e-07,71;UBERON:0009618,5.27e-07,71;UBERON:0003077,9.38e-07,72;UBERON:0007285,9.38e-07,72 | |||
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| ||
|short_description=p7@CAMK2D | |short_description=p7@CAMK2D | ||
}} | }} |
Latest revision as of 19:26, 24 September 2015
Short description: | p7@CAMK2D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CAMK2D_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000394524, ENST00000505132_5end |
EntrezGene: | CAMK2D |
HGNC: | 1462 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.08e-09 | 76 |
multi fate stem cell | 7.91e-09 | 427 |
somatic stem cell | 1.73e-08 | 433 |
stem cell | 1.32e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.73e-11 | 167 |
mesoderm | 4.73e-08 | 315 |
mesoderm-derived structure | 4.73e-08 | 315 |
presumptive mesoderm | 4.73e-08 | 315 |
muscle tissue | 5.54e-08 | 64 |
musculature | 5.54e-08 | 64 |
musculature of body | 5.54e-08 | 64 |
tissue | 1.95e-07 | 773 |
skeletal muscle tissue | 4.52e-07 | 62 |
striated muscle tissue | 4.52e-07 | 62 |
myotome | 4.52e-07 | 62 |
somite | 5.27e-07 | 71 |
presomitic mesoderm | 5.27e-07 | 71 |
presumptive segmental plate | 5.27e-07 | 71 |
dermomyotome | 5.27e-07 | 71 |
trunk paraxial mesoderm | 5.27e-07 | 71 |
paraxial mesoderm | 9.38e-07 | 72 |
presumptive paraxial mesoderm | 9.38e-07 | 72 |