FFCP PHASE1:Hg19::chr18:7754957..7754970,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5797 | |EntrezGene=5797 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9675 | |HGNC=9675 | ||
|TSSclassifier=strong | |||
|UniProt=E7EPS8 | |UniProt=E7EPS8 | ||
|association_with_transcript=0bp_to_ENST00000400053_5end | |association_with_transcript=0bp_to_ENST00000400053_5end | ||
|cluster_id=chr18:7754957..7754970,+ | |||
|description=CAGE_peak_13_at_PTPRM_5end | |description=CAGE_peak_13_at_PTPRM_5end | ||
|id=chr18:7754957..7754970,+ | |id=chr18:7754957..7754970,+ | ||
|ontology_enrichment_celltype=CL:0000181!1.27e-07!12;CL:0000417!1.27e-07!12;CL:0000668!1.27e-07!12;CL:0000414!1.27e-07!12;CL:0000412!1.27e-07!12;CL:0000182!1.27e-07!12 | |ontology_enrichment_celltype=CL:0000181!1.27e-07!12;CL:0000417!1.27e-07!12;CL:0000668!1.27e-07!12;CL:0000414!1.27e-07!12;CL:0000412!1.27e-07!12;CL:0000182!1.27e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002563;7.70e-18;4!CL:0002253;7.98e-10;2!CL:0002231;6.69e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,8.04e-18,4;CL:0002253,7.98e-10,2;CL:0002231,6.50e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003918;2.07e-15;10!UBERON:0007687;2.07e-15;10!UBERON:0003104;7.87e-14;31 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4468;8.69e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,8.69e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0001896!6.50e-12!3;UBERON:0005290!6.50e-12!3;UBERON:0010096!6.50e-12!3;UBERON:0006947!7.26e-12!3;UBERON:0004054!7.26e-12!3;UBERON:0005172!5.23e-10!55;UBERON:0005173!5.23e-10!55;UBERON:0007023!1.20e-09!115;UBERON:0005904!5.28e-09!4;UBERON:0002417!1.02e-08!61;UBERON:0000916!1.02e-08!61;UBERON:0003929!1.09e-08!54;UBERON:0002113!1.43e-07!27;UBERON:0003918!1.43e-07!27;UBERON:0005095!1.43e-07!27;UBERON:0007687!1.43e-07!27;UBERON:0002298!1.80e-07!8 | |ontology_enrichment_uberon=UBERON:0001896!6.50e-12!3;UBERON:0005290!6.50e-12!3;UBERON:0010096!6.50e-12!3;UBERON:0006947!7.26e-12!3;UBERON:0004054!7.26e-12!3;UBERON:0005172!5.23e-10!55;UBERON:0005173!5.23e-10!55;UBERON:0007023!1.20e-09!115;UBERON:0005904!5.28e-09!4;UBERON:0002417!1.02e-08!61;UBERON:0000916!1.02e-08!61;UBERON:0003929!1.09e-08!54;UBERON:0002113!1.43e-07!27;UBERON:0003918!1.43e-07!27;UBERON:0005095!1.43e-07!27;UBERON:0007687!1.43e-07!27;UBERON:0002298!1.80e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0001896;8.03e-23;3!UBERON:0005290;8.03e-23;3!UBERON:0001242;7.70e-18;4!UBERON:0001262;7.70e-18;4!UBERON:0004786;7.70e-18;4!UBERON:0004808;7.70e-18;4!UBERON:0001277;7.70e-18;4!UBERON:0001000;9.48e-18;1!UBERON:0005352;9.48e-18;1!UBERON:0002298;6.34e-12;6!UBERON:0000485;1.30e-10;7!UBERON:0003929;1.30e-10;7!UBERON:0003350;2.11e-09;8!UBERON:0006947;8.86e-07;3!UBERON:0004054;8.86e-07;3!UBERON:0002113;9.22e-07;24!UBERON:0011143;9.22e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,5.15e-23,3;UBERON:0005290,5.15e-23,3;UBERON:0010096,5.15e-23,3;UBERON:0001242,8.04e-18,4;UBERON:0001262,8.04e-18,4;UBERON:0004786,8.04e-18,4;UBERON:0004808,8.04e-18,4;UBERON:0001277,8.04e-18,4;UBERON:0001000,1.22e-17,1;UBERON:0005352,1.22e-17,1;UBERON:0002298,5.08e-12,6;UBERON:0003350,2.16e-09,8;UBERON:0000485,1.90e-08,9;UBERON:0003929,1.01e-07,54;UBERON:0006947,9.64e-07,3;UBERON:0004054,9.64e-07,3 | |||
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| ||
|short_description=p13@PTPRM | |short_description=p13@PTPRM | ||
}} | }} |
Latest revision as of 19:52, 24 September 2015
Short description: | p13@PTPRM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_PTPRM_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000400053_5end |
EntrezGene: | PTPRM |
HGNC: | 9675 |
UniProt: | E7EPS8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 8.04e-18 | 4 |
epithelial cell of large intestine | 7.98e-10 | 2 |
epithelial cell of prostate | 6.50e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 5.15e-23 | 3 |
myelencephalon | 5.15e-23 | 3 |
future myelencephalon | 5.15e-23 | 3 |
intestinal mucosa | 8.04e-18 | 4 |
wall of intestine | 8.04e-18 | 4 |
gastrointestinal system mucosa | 8.04e-18 | 4 |
gastrointestinal system epithelium | 8.04e-18 | 4 |
intestinal epithelium | 8.04e-18 | 4 |
vas deferens | 1.22e-17 | 1 |
spermatic cord | 1.22e-17 | 1 |
brainstem | 5.08e-12 | 6 |
epithelium of mucosa | 2.16e-09 | 8 |
simple columnar epithelium | 1.90e-08 | 9 |
gut epithelium | 1.01e-07 | 54 |
male genital duct | 9.64e-07 | 3 |
internal male genitalia | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 8.69e-10 | 2 |