FFCP PHASE1:Hg19::chr4:1188924..1188945,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10417 | |EntrezGene=10417 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11253 | |HGNC=11253 | ||
|TSSclassifier=strong | |||
|UniProt=D6RBY3 | |UniProt=D6RBY3 | ||
|association_with_transcript=0bp_to_ENST00000502483_5end | |association_with_transcript=0bp_to_ENST00000502483_5end | ||
|cluster_id=chr4:1188924..1188945,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_8_at_SPON2_5end | |description=CAGE_peak_8_at_SPON2_5end | ||
|id=chr4:1188924..1188945,- | |id=chr4:1188924..1188945,- | ||
|ontology_enrichment_celltype=CL:0002334!4.82e-09!12;CL:0000057!2.75e-07!75;CL:0000515!3.73e-07!4;CL:0000136!6.66e-07!15;CL:0002570!6.98e-07!8 | |ontology_enrichment_celltype=CL:0002334!4.82e-09!12;CL:0000057!2.75e-07!75;CL:0000515!3.73e-07!4;CL:0000136!6.66e-07!15;CL:0002570!6.98e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002580;5.94e-13;3!CL:0000056;4.98e-10;4!CL:0002334;1.42e-08;12!CL:0002556;2.68e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,9.45e-13,3;CL:0000057,1.25e-10,76;CL:0000515,6.41e-10,4;CL:0002334,1.51e-08,12;CL:0002556,2.71e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000515;4.98e-10;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;3.62e-07;3!DOID:127;3.62e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,3.63e-07,3;DOID:127,3.63e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.65e-10!115 | |ontology_enrichment_uberon=UBERON:0007023!1.65e-10!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.46e-10;2!UBERON:0002757;1.46e-10;2!UBERON:0010134;1.46e-10;2!UBERON:0005408;1.46e-10;2!UBERON:0001899;1.46e-10;2!UBERON:0000310;3.13e-10;10!UBERON:0001443;2.81e-09;11!UBERON:0001758;2.68e-07;6!UBERON:0003672;2.68e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.46e-10,2;UBERON:0002757,1.46e-10,2;UBERON:0010134,1.46e-10,2;UBERON:0005408,1.46e-10,2;UBERON:0001899,1.46e-10,2;UBERON:0000310,3.33e-10,10;UBERON:0001443,2.97e-09,11;UBERON:0001758,2.71e-07,6;UBERON:0003672,2.71e-07,6 | |||
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| ||
|short_description=p8@SPON2 | |short_description=p8@SPON2 | ||
}} | }} |
Latest revision as of 20:56, 24 September 2015
Short description: | p8@SPON2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SPON2_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 0bp_to_ENST00000502483_5end |
EntrezGene: | SPON2 |
HGNC: | 11253 |
UniProt: | D6RBY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 9.45e-13 | 3 |
fibroblast | 1.25e-10 | 76 |
skeletal muscle myoblast | 6.41e-10 | 4 |
preadipocyte | 1.51e-08 | 12 |
fibroblast of periodontium | 2.71e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.46e-10 | 2 |
regional part of epithalamus | 1.46e-10 | 2 |
secretory circumventricular organ | 1.46e-10 | 2 |
circumventricular organ | 1.46e-10 | 2 |
epithalamus | 1.46e-10 | 2 |
breast | 3.33e-10 | 10 |
chest | 2.97e-09 | 11 |
periodontium | 2.71e-07 | 6 |
dentition | 2.71e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 3.63e-07 | 3 |
leiomyoma | 3.63e-07 | 3 |