FFCP PHASE1:Hg19::chr19:7797045..7797065,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=339390 | |EntrezGene=339390 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24591 | |HGNC=24591 | ||
|TSSclassifier=strong | |||
|UniProt=Q6UXB4,E7EQ56,B7ZKQ2,Q08G24,Q6XYD1 | |UniProt=Q6UXB4,E7EQ56,B7ZKQ2,Q08G24,Q6XYD1 | ||
|association_with_transcript=0bp_to_ENST00000328853,ENST00000381308,NM_001244856,NM_198492,uc002mhp.3_5end | |association_with_transcript=0bp_to_ENST00000328853,ENST00000381308,NM_001244856,NM_198492,uc002mhp.3_5end | ||
|cluster_id=chr19:7797045..7797065,- | |||
|coexpression_cluster_id=C2505 | |coexpression_cluster_id=C2505 | ||
|description=CAGE_peak_2_at_CLEC4G_5end | |description=CAGE_peak_2_at_CLEC4G_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000840;2.20e-19;5!CL:0000990;3.90e-13;8!CL:0000451;7.47e-11;10 | |ontology_enrichment_celltype_v019=CL:0000840;2.20e-19;5!CL:0000990;3.90e-13;8!CL:0000451;7.47e-11;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000840,2.34e-19,5;CL:0001029,2.34e-19,5;CL:0000990,4.06e-13,8;CL:0000451,7.72e-11,10 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.48e-17;3!UBERON:0010227;4.53e-14;1!UBERON:0010115;8.05e-14;1!UBERON:0006965;1.93e-07;2 | |ontology_enrichment_development_v019=UBERON:0006215;3.48e-17;3!UBERON:0010227;4.53e-14;1!UBERON:0010115;8.05e-14;1!UBERON:0006965;1.93e-07;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.29e-36!115;UBERON:0004177!3.70e-08!7;UBERON:0005057!4.57e-08!26 | |ontology_enrichment_uberon=UBERON:0007023!3.29e-36!115;UBERON:0004177!3.70e-08!7;UBERON:0005057!4.57e-08!26 | ||
|ontology_enrichment_uberon_v019=UBERON:0002079;4.53e-14;1!UBERON:0002363;8.05e-14;1!UBERON:0000029;8.05e-14;1!UBERON:0002037;4.55e-09;6!UBERON:0002081;1.12e-07;2!UBERON:0002360;1.50e-07;2!UBERON:0000094;1.50e-07;2!UBERON:0010743;1.50e-07;2!UBERON:0003127;2.32e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0002079;4.53e-14;1!UBERON:0002363;8.05e-14;1!UBERON:0000029;8.05e-14;1!UBERON:0002037;4.55e-09;6!UBERON:0002081;1.12e-07;2!UBERON:0002360;1.50e-07;2!UBERON:0000094;1.50e-07;2!UBERON:0010743;1.50e-07;2!UBERON:0003127;2.32e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,4.53e-14,1;UBERON:0002363,7.55e-14,1;UBERON:0007645,7.55e-14,1;UBERON:0007647,7.55e-14,1;UBERON:0010115,7.55e-14,1;UBERON:0000029,8.58e-14,1;UBERON:0002037,4.74e-09,6;UBERON:0006215,4.74e-09,6;UBERON:0007023,9.41e-08,114;UBERON:0002081,1.12e-07,2;UBERON:0010227,1.12e-07,2;UBERON:0002360,1.45e-07,2;UBERON:0000094,1.45e-07,2;UBERON:0010743,1.45e-07,2;UBERON:0003127,2.40e-07,2 | |||
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| ||
|short_description=p2@CLEC4G | |short_description=p2@CLEC4G | ||
}} | }} |
Latest revision as of 21:52, 24 September 2015
Short description: | p2@CLEC4G |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CLEC4G_5end |
Coexpression cluster: | C2505_Hepatocyte_lymph_vein_liver_Dendritic_left_submaxillary |
Association with transcript: | 0bp_to_ENST00000328853, ENST00000381308, NM_001244856, NM_198492, uc002mhp.3_5end |
EntrezGene: | CLEC4G |
HGNC: | 24591 |
UniProt: | Q6UXB4E7EQ56B7ZKQ2Q08G24Q6XYD1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 2.34e-19 | 5 |
common dendritic progenitor | 2.34e-19 | 5 |
conventional dendritic cell | 4.06e-13 | 8 |
dendritic cell | 7.72e-11 | 10 |
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 4.53e-14 | 1 |
dura mater | 7.55e-14 | 1 |
future meninx | 7.55e-14 | 1 |
ectomeninx | 7.55e-14 | 1 |
future dura mater | 7.55e-14 | 1 |
lymph node | 8.58e-14 | 1 |
cerebellum | 4.74e-09 | 6 |
rhombic lip | 4.74e-09 | 6 |
adult organism | 9.41e-08 | 114 |
cardiac atrium | 1.12e-07 | 2 |
future cardiac atrium | 1.12e-07 | 2 |
meninx | 1.45e-07 | 2 |
membrane organ | 1.45e-07 | 2 |
meningeal cluster | 1.45e-07 | 2 |
open tracheal system trachea | 2.40e-07 | 2 |