FFCP PHASE2:Hg19::chr9:125231389..125231402,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:26740 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript |HGNC=HGNC:8209...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=26740 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC= | |HGNC=8209 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=B3KVN8 | ||
|association_with_transcript=20bp_to_AK123016_5end | |association_with_transcript=20bp_to_AK123016_5end | ||
|cluster_id=chr9:125231389..125231402,+ | |cluster_id=chr9:125231389..125231402,+ | ||
Latest revision as of 22:37, 24 September 2015
| Short description: | p2@OR1J2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_OR1J2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 20bp_to_AK123016_5end |
| EntrezGene: | OR1J2 |
| HGNC: | 8209 |
| UniProt: | B3KVN8 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@OR1J2 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| skin fibroblast | 3.71e-22 | 23 |
| mesenchymal stem cell of adipose | 7.60e-10 | 8 |
| androgen binding protein secreting cell | 1.15e-09 | 1 |
| seminiferous tubule epithelial cell | 1.15e-09 | 1 |
| Sertoli cell | 1.15e-09 | 1 |
| stromal cell of pancreas | 1.48e-09 | 1 |
| fibroblast | 1.43e-07 | 76 |
| mesenchymal cell | 7.27e-07 | 354 |
Showing 1 to 8 of 8 entries
| Ontology term | p-value | n |
|---|---|---|
| right ovary | 1.05e-15 | 5 |
| skin of body | 5.50e-12 | 41 |
| female gonad | 1.19e-10 | 13 |
| integument | 1.43e-10 | 46 |
| integumental system | 1.43e-10 | 46 |
| gonad | 6.39e-10 | 21 |
| indifferent external genitalia | 6.39e-10 | 21 |
| indifferent gonad | 6.39e-10 | 21 |
| gonad primordium | 6.39e-10 | 21 |
| mesothelium | 1.15e-09 | 1 |
Showing 1 to 10 of 20 entries
| Ontology term | p-value | n |
|---|---|---|
| musculoskeletal system disease | 1.64e-26 | 5 |
| myotonic disease | 1.64e-26 | 5 |
| muscle tissue disease | 1.64e-26 | 5 |
| myopathy | 1.64e-26 | 5 |
| muscular disease | 1.64e-26 | 5 |
| myotonic dystrophy | 1.64e-26 | 5 |
| ovarian cancer | 6.25e-15 | 14 |
| female reproductive organ cancer | 1.16e-07 | 27 |
| reproductive organ cancer | 4.05e-07 | 29 |
Showing 1 to 9 of 9 entries
