FFCP PHASE1:Hg19::chr11:107729887..107729927,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54733 | |EntrezGene=54733 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23615 | |HGNC=23615 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IXU6 | |UniProt=Q8IXU6 | ||
|association_with_transcript=0bp_to_ENST00000525815,NM_017515,uc001pjq.2_5end | |association_with_transcript=0bp_to_ENST00000525815,NM_017515,uc001pjq.2_5end | ||
|cluster_id=chr11:107729887..107729927,- | |||
|description=CAGE_peak_3_at_SLC35F2_5end | |description=CAGE_peak_3_at_SLC35F2_5end | ||
|id=chr11:107729887..107729927,- | |id=chr11:107729887..107729927,- | ||
|ontology_enrichment_celltype=CL:0000066!1.94e-21!254;CL:0002139!5.07e-12!24;CL:0000076!9.36e-12!62;CL:0000071!3.25e-09!18;CL:0002546!3.25e-09!18;CL:0002076!4.79e-09!43;CL:0002078!3.05e-08!44;CL:0000115!3.88e-08!35;CL:0000213!4.27e-08!57;CL:0000215!4.27e-08!57 | |ontology_enrichment_celltype=CL:0000066!1.94e-21!254;CL:0002139!5.07e-12!24;CL:0000076!9.36e-12!62;CL:0000071!3.25e-09!18;CL:0002546!3.25e-09!18;CL:0002076!4.79e-09!43;CL:0002078!3.05e-08!44;CL:0000115!3.88e-08!35;CL:0000213!4.27e-08!57;CL:0000215!4.27e-08!57 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.17e-13;24!CL:0000071;2.16e-10;18!CL:0000115;1.88e-08;36!CL:0002076;3.49e-07;42 | |ontology_enrichment_celltype_v019=CL:0002139;1.17e-13;24!CL:0000071;2.16e-10;18!CL:0000115;1.88e-08;36!CL:0002076;3.49e-07;42 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.95e-22,253;CL:0002139,6.63e-14,24;CL:0000076,3.50e-11,63;CL:0000071,1.36e-10,18;CL:0002546,1.36e-10,18;CL:0000115,5.69e-10,36;CL:0002076,6.19e-10,42;CL:0000213,6.70e-09,58;CL:0000215,6.70e-09,58;CL:0002078,7.16e-09,45;CL:0002321,9.94e-07,250 | |||
|ontology_enrichment_development_v019=CL:0002546;2.16e-10;18 | |ontology_enrichment_development_v019=CL:0002546;2.16e-10;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000467!3.73e-13!625;UBERON:0000480!4.76e-13!626;UBERON:0000468!6.26e-13!659;UBERON:0000922!3.94e-12!612;UBERON:0002050!1.87e-11!605;UBERON:0005423!1.87e-11!605;UBERON:0000923!3.44e-11!604;UBERON:0005291!3.44e-11!604;UBERON:0006598!3.44e-11!604;UBERON:0002532!3.44e-11!604;UBERON:0000487!3.09e-09!22;UBERON:0001986!3.25e-09!18;UBERON:0004638!3.25e-09!18;UBERON:0004852!3.25e-09!18;UBERON:0006554!1.07e-07!44;UBERON:0006914!1.11e-07!25;UBERON:0000062!1.24e-07!511;UBERON:0001008!4.14e-07!45;UBERON:0000489!5.67e-07!32 | |ontology_enrichment_uberon=UBERON:0000467!3.73e-13!625;UBERON:0000480!4.76e-13!626;UBERON:0000468!6.26e-13!659;UBERON:0000922!3.94e-12!612;UBERON:0002050!1.87e-11!605;UBERON:0005423!1.87e-11!605;UBERON:0000923!3.44e-11!604;UBERON:0005291!3.44e-11!604;UBERON:0006598!3.44e-11!604;UBERON:0002532!3.44e-11!604;UBERON:0000487!3.09e-09!22;UBERON:0001986!3.25e-09!18;UBERON:0004638!3.25e-09!18;UBERON:0004852!3.25e-09!18;UBERON:0006554!1.07e-07!44;UBERON:0006914!1.11e-07!25;UBERON:0000062!1.24e-07!511;UBERON:0001008!4.14e-07!45;UBERON:0000489!5.67e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0000487;7.97e-11;22!UBERON:0004638;2.16e-10;18!UBERON:0001986;2.16e-10;18!UBERON:0004852;2.16e-10;18!UBERON:0000490;3.10e-09;33!UBERON:0006914;2.02e-08;25!UBERON:0006554;5.74e-08;30!UBERON:0001008;5.74e-08;30!UBERON:0000489;2.61e-07;29 | |ontology_enrichment_uberon_v019=UBERON:0000487;7.97e-11;22!UBERON:0004638;2.16e-10;18!UBERON:0001986;2.16e-10;18!UBERON:0004852;2.16e-10;18!UBERON:0000490;3.10e-09;33!UBERON:0006914;2.02e-08;25!UBERON:0006554;5.74e-08;30!UBERON:0001008;5.74e-08;30!UBERON:0000489;2.61e-07;29 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000487,5.51e-11,22;UBERON:0004638,1.36e-10,18;UBERON:0001986,1.36e-10,18;UBERON:0004852,1.36e-10,18;UBERON:0006554,1.51e-09,47;UBERON:0001008,4.60e-09,48;UBERON:0005423,9.30e-09,581;UBERON:0000922,1.12e-08,592;UBERON:0006914,1.48e-08,25;UBERON:0000489,7.99e-07,31 | |||
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| ||
|short_description=p3@SLC35F2 | |short_description=p3@SLC35F2 | ||
}} | }} |
Latest revision as of 22:56, 24 September 2015
Short description: | p3@SLC35F2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC35F2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000525815, NM_017515, uc001pjq.2_5end |
EntrezGene: | SLC35F2 |
HGNC: | 23615 |
UniProt: | Q8IXU6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.95e-22 | 253 |
endothelial cell of vascular tree | 6.63e-14 | 24 |
squamous epithelial cell | 3.50e-11 | 63 |
blood vessel endothelial cell | 1.36e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.36e-10 | 18 |
endothelial cell | 5.69e-10 | 36 |
endo-epithelial cell | 6.19e-10 | 42 |
lining cell | 6.70e-09 | 58 |
barrier cell | 6.70e-09 | 58 |
meso-epithelial cell | 7.16e-09 | 45 |
embryonic cell | 9.94e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
simple squamous epithelium | 5.51e-11 | 22 |
blood vessel endothelium | 1.36e-10 | 18 |
endothelium | 1.36e-10 | 18 |
cardiovascular system endothelium | 1.36e-10 | 18 |
urinary system structure | 1.51e-09 | 47 |
renal system | 4.60e-09 | 48 |
developing anatomical structure | 9.30e-09 | 581 |
embryo | 1.12e-08 | 592 |
squamous epithelium | 1.48e-08 | 25 |
cavitated compound organ | 7.99e-07 | 31 |