FFCP PHASE1:Hg19::chr2:223289311..223289322,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=130367 | |EntrezGene=130367 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19953 | |HGNC=19953 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IWX5 | |UniProt=Q8IWX5 | ||
|association_with_transcript=0bp_to_NM_152386,uc010zlo.1,uc010zlp.1_5end | |association_with_transcript=0bp_to_NM_152386,uc010zlo.1,uc010zlp.1_5end | ||
|cluster_id=chr2:223289311..223289322,+ | |||
|description=CAGE_peak_9_at_SGPP2_5end | |description=CAGE_peak_9_at_SGPP2_5end | ||
|id=chr2:223289311..223289322,+ | |id=chr2:223289311..223289322,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.47e-09!42;CL:0000860!3.94e-08!45 | |ontology_enrichment_celltype=CL:0002057!3.47e-09!42;CL:0000860!3.94e-08!45 | ||
|ontology_enrichment_celltype_v019=CL:0001014;1.40e-12;2!CL:0001016;1.40e-12;2!CL:0002623;1.43e-08;3!CL:0002553;7.55e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,1.25e-12,2;CL:0001016,1.25e-12,2;CL:0002623,8.73e-09,3;CL:0002553,6.02e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0009143;7.55e-07;1!UBERON:0005754;7.55e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.09e-28!115;UBERON:0001049!1.23e-22!57;UBERON:0005068!1.23e-22!57;UBERON:0006241!1.23e-22!57;UBERON:0007135!1.23e-22!57;UBERON:0002616!1.10e-18!59;UBERON:0002780!3.76e-18!41;UBERON:0001890!3.76e-18!41;UBERON:0006240!3.76e-18!41;UBERON:0003080!1.72e-17!42;UBERON:0003075!2.19e-17!86;UBERON:0007284!2.19e-17!86;UBERON:0002346!5.82e-16!90;UBERON:0001869!4.26e-15!32;UBERON:0001893!4.58e-15!34;UBERON:0002020!5.19e-15!34;UBERON:0003528!5.19e-15!34;UBERON:0000955!9.90e-15!69;UBERON:0006238!9.90e-15!69;UBERON:0002791!3.80e-14!33;UBERON:0001017!8.09e-14!82;UBERON:0000073!1.74e-13!94;UBERON:0001016!1.74e-13!94;UBERON:0005743!2.59e-13!86;UBERON:0002619!2.60e-13!22;UBERON:0003056!1.11e-12!61;UBERON:0000033!1.51e-11!123;UBERON:0000153!1.91e-11!129;UBERON:0007811!1.91e-11!129;UBERON:0001950!1.91e-11!20;UBERON:0000956!4.14e-11!25;UBERON:0000203!4.14e-11!25;UBERON:0000062!1.30e-10!511;UBERON:0004121!3.26e-09!169;UBERON:0002050!6.75e-09!605;UBERON:0005423!6.75e-09!605;UBERON:0000922!9.83e-09!612;UBERON:0000924!1.21e-08!173;UBERON:0006601!1.21e-08!173;UBERON:0000467!1.57e-08!625;UBERON:0000923!1.71e-08!604;UBERON:0005291!1.71e-08!604;UBERON:0006598!1.71e-08!604;UBERON:0002532!1.71e-08!604;UBERON:0000480!1.88e-08!626;UBERON:0000200!6.56e-08!6 | |ontology_enrichment_uberon=UBERON:0007023!2.09e-28!115;UBERON:0001049!1.23e-22!57;UBERON:0005068!1.23e-22!57;UBERON:0006241!1.23e-22!57;UBERON:0007135!1.23e-22!57;UBERON:0002616!1.10e-18!59;UBERON:0002780!3.76e-18!41;UBERON:0001890!3.76e-18!41;UBERON:0006240!3.76e-18!41;UBERON:0003080!1.72e-17!42;UBERON:0003075!2.19e-17!86;UBERON:0007284!2.19e-17!86;UBERON:0002346!5.82e-16!90;UBERON:0001869!4.26e-15!32;UBERON:0001893!4.58e-15!34;UBERON:0002020!5.19e-15!34;UBERON:0003528!5.19e-15!34;UBERON:0000955!9.90e-15!69;UBERON:0006238!9.90e-15!69;UBERON:0002791!3.80e-14!33;UBERON:0001017!8.09e-14!82;UBERON:0000073!1.74e-13!94;UBERON:0001016!1.74e-13!94;UBERON:0005743!2.59e-13!86;UBERON:0002619!2.60e-13!22;UBERON:0003056!1.11e-12!61;UBERON:0000033!1.51e-11!123;UBERON:0000153!1.91e-11!129;UBERON:0007811!1.91e-11!129;UBERON:0001950!1.91e-11!20;UBERON:0000956!4.14e-11!25;UBERON:0000203!4.14e-11!25;UBERON:0000062!1.30e-10!511;UBERON:0004121!3.26e-09!169;UBERON:0002050!6.75e-09!605;UBERON:0005423!6.75e-09!605;UBERON:0000922!9.83e-09!612;UBERON:0000924!1.21e-08!173;UBERON:0006601!1.21e-08!173;UBERON:0000467!1.57e-08!625;UBERON:0000923!1.71e-08!604;UBERON:0005291!1.71e-08!604;UBERON:0006598!1.71e-08!604;UBERON:0002532!1.71e-08!604;UBERON:0000480!1.88e-08!626;UBERON:0000200!6.56e-08!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0002298;7.57e-09;6!UBERON:0000988;2.59e-08;3!UBERON:0002372;7.55e-07;1!UBERON:0000998;7.55e-07;1!UBERON:0006868;7.55e-07;1!UBERON:0001961;7.55e-07;1!UBERON:0001744;7.55e-07;1!UBERON:0001042;7.55e-07;1!UBERON:0001735;7.55e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,6.46e-09,6;UBERON:0000988,1.38e-08,3;UBERON:0000998,4.78e-07,1;UBERON:0006868,4.78e-07,1;UBERON:0002372,8.49e-07,1;UBERON:0001961,8.49e-07,1;UBERON:0001744,8.49e-07,1;UBERON:0001735,8.49e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.492603536699674,0.236132343941038,0,0,0,0,0,1.10926203050036,0,0,0,0.553995408531877,0.601633342410425,0.651032612147555,0,0,0,0.145398238779565,0,0,0.232429036905685,0.411167888021826,0.619412741790207,0,0,0.709446689665756,0.344745680736619,1.29096936716765,0,0.188242339542605,0.272906150057846,0.449446968890169,0,0.320929027076094,0.639337125799041,0,0,0,2.03146467040009,3.40431134814684,2.4912889959823,0.502497330513487,0.521482918420201,0,1.21079900526674,5.15588690382591,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0.294605907474837,0.443067789167242,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.392937226493138,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00902836572851,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.644566922551274,0,0,0,0,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0.495854746082934,1.15314040419064,0,1.4162089319777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,1.68471475667626,1.33029046061003,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0.23874448473769,0,0,0,0.281338832821026,0,0,0,0,0.276283915531148,0,0,0.246169610922139,0,0,0.716084698702437,0,0.197286811273867,0,0,0,0.185536196323703,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0.361789315876224,0,0.442317039724898,0.591095237907095,0.219385397153973,0,0.41827123283581,0.538651809526579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.326465616318295,0,0,0,1.23840590304675,1.22206028986725,0.296521128680622,0.123563938946503,0.104421949505455,0.269604531922708,0,0.702793337176017,0,0,0,0.789168805698781,0,0.30607276163049,0.063186579628488,0.150323419414493,0.103688191397247,0,0,0,0,1.70765727617876,0,0,0.195984794828755,0,0,0,0,0,0,1.45483524732629,0,0.225980740780532,0,0,0.50648636764703,0.195551382734803,0.320635281006135,0.85381197895741,0.19980960958213,0.288180834308212,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0.458320848023367,0,0.998395002494955,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0.0846733320657845,2.38568906942791,0.408610218334727,0,0,0,1.5748172408605,8.51182150013745,0.789744236554321,0,0.709251365692784,0.996637174564964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68067843270016,0.13223260174269,0,0,0.533937062838473,0.314408610199332,0.414239055347196,0,0,0.487170393523584,0,0.544017803369474,0,0,0,0.314108192500469,0.886068179966986,0.854183854313742,1.001527445652,0.573409195690071,0.332787154610557,1.05563885000352,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0.419638523158333,1.24415452006595,0.127894371303652,0.107824811396682,0.157265941855896,0.109209638192014,0,0,0,0,0,0,1.60114149657094,0,0,0.642292250964595,0,0.159633859057151,0.41023272848151,0,0.691572524642179,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0.87798860003913,0.781078098613847,1.44680757550829,0.887821342714695,0,0,0,0,0,0.535701835878287,1.68141861109412,0.606965604236632,0.682986574053893,0.0887023701626388,0,0,1.90315252335129,0.591954962065642,0.118193840883968,0,0.156986185701028,0.628462359664008,0,0,0,0,0.142953088353313,0,0,0,0,0.828864656652147,1.87790324803345,2.76503864725637,0,0,0,1.69354820076372,0.68732060563215,0.31020638566432,0,0.335566295393377,0.098150233615243,1.5849330247695,0,0,0,0.485710993059139,0.233939463462106,0,0,1.01651473835064,0,0,1.77500563648273,0,0,0.245148321753905,0,0.981542335574726,0,0.4226557275834,0,0,0,0,0,0,0,0.730336388246517,0.458729283404541,0,0,0.611923411718232,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.129177819672012,0.186224142887574,0,0,0.404234377916439,1.95945073107265,0,1.34704106029175,0.717222053926764,0.665320713092027,0.162806537221949,0,0,0.988077223172456,0,0,0.813792356631477,0.665756774185513,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.492603536699674,0.236132343941038,0,0,0,0,0,1.10926203050036,0,0,0,0.553995408531877,0.601633342410425,0.651032612147555,0,0,0,0.145398238779565,0,0,0.232429036905685,0.411167888021826,0.619412741790207,0,0,0.709446689665756,0.344745680736619,1.29096936716765,0,0.188242339542605,0.272906150057846,0.449446968890169,0,0.320929027076094,0.639337125799041,0,0,0,2.03146467040009,3.40431134814684,2.4912889959823,0.502497330513487,0.521482918420201,0,1.21079900526674,5.15588690382591,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0.294605907474837,0.443067789167242,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.392937226493138,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00902836572851,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.644566922551274,0,0,0,0,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0.495854746082934,1.15314040419064,0,1.4162089319777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,1.68471475667626,1.33029046061003,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0.23874448473769,0,0,0,0.281338832821026,0,0,0,0,0.276283915531148,0,0,0.246169610922139,0,0,0.716084698702437,0,0.197286811273867,0,0,0,0.185536196323703,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0.361789315876224,0,0.442317039724898,0.591095237907095,0.219385397153973,0,0.41827123283581,0.538651809526579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.326465616318295,0,0,0,1.23840590304675,1.22206028986725,0.296521128680622,0.123563938946503,0.104421949505455,0.269604531922708,0,0.702793337176017,0,0,0,0.789168805698781,0,0.30607276163049,0.063186579628488,0.150323419414493,0.103688191397247,0,0,0,0,1.70765727617876,0,0,0.195984794828755,0,0,0,0,0,0,1.45483524732629,0,0.225980740780532,0,0,0.50648636764703,0.195551382734803,0.320635281006135,0.85381197895741,0.19980960958213,0.288180834308212,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0.458320848023367,0,0.998395002494955,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0.0846733320657845,2.38568906942791,0.408610218334727,0,0,0,1.5748172408605,8.51182150013745,0.789744236554321,0,0.709251365692784,0.996637174564964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68067843270016,0.13223260174269,0,0,0.533937062838473,0.314408610199332,0.414239055347196,0,0,0.487170393523584,0,0.544017803369474,0,0,0,0.314108192500469,0.886068179966986,0.854183854313742,1.001527445652,0.573409195690071,0.332787154610557,1.05563885000352,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0.419638523158333,1.24415452006595,0.127894371303652,0.107824811396682,0.157265941855896,0.109209638192014,0,0,0,0,0,0,1.60114149657094,0,0,0.642292250964595,0,0.159633859057151,0.41023272848151,0,0.691572524642179,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0.87798860003913,0.781078098613847,1.44680757550829,0.887821342714695,0,0,0,0,0,0.535701835878287,1.68141861109412,0.606965604236632,0.682986574053893,0.0887023701626388,0,0,1.90315252335129,0.591954962065642,0.118193840883968,0,0.156986185701028,0.628462359664008,0,0,0,0,0.142953088353313,0,0,0,0,0.828864656652147,1.87790324803345,2.76503864725637,0,0,0,1.69354820076372,0.68732060563215,0.31020638566432,0,0.335566295393377,0.098150233615243,1.5849330247695,0,0,0,0.485710993059139,0.233939463462106,0,0,1.01651473835064,0,0,1.77500563648273,0,0,0.245148321753905,0,0.981542335574726,0,0.4226557275834,0,0,0,0,0,0,0,0.730336388246517,0.458729283404541,0,0,0.611923411718232,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.129177819672012,0.186224142887574,0,0,0.404234377916439,1.95945073107265,0,1.34704106029175,0.717222053926764,0.665320713092027,0.162806537221949,0,0,0.988077223172456,0,0,0.813792356631477,0.665756774185513,0,0 | ||
|short_description=p9@SGPP2 | |short_description=p9@SGPP2 | ||
}} | }} |
Latest revision as of 23:33, 24 September 2015
Short description: | p9@SGPP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SGPP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_152386, uc010zlo.1, uc010zlp.1_5end |
EntrezGene: | SGPP2 |
HGNC: | 19953 |
UniProt: | Q8IWX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 1.25e-12 | 2 |
immature CD1a-positive Langerhans cell | 1.25e-12 | 2 |
acinar cell of salivary gland | 8.73e-09 | 3 |
lung fibroblast | 6.02e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
brainstem | 6.46e-09 | 6 |
pons | 1.38e-08 | 3 |
seminal vesicle | 4.78e-07 | 1 |
seminal fluid secreting gland | 4.78e-07 | 1 |
tonsil | 8.49e-07 | 1 |
mucosa-associated lymphoid tissue | 8.49e-07 | 1 |
lymphoid tissue | 8.49e-07 | 1 |
tonsillar ring | 8.49e-07 | 1 |