FFCP PHASE1:Hg19::chr20:29978325..29978354,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=245932 | |EntrezGene=245932 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18099 | |HGNC=18099 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=17bp_to_ENST00000492344_5end | |association_with_transcript=17bp_to_ENST00000492344_5end | ||
|cluster_id=chr20:29978325..29978354,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_1_at_DEFB119_5end | |description=CAGE_peak_1_at_DEFB119_5end | ||
|id=chr20:29978325..29978354,- | |id=chr20:29978325..29978354,- | ||
|ontology_enrichment_celltype=CL:0002274!3.43e-21!5;CL:0000457!3.43e-21!5;CL:0002191!3.43e-21!5;CL:0000097!3.43e-21!5;CL:0000831!3.43e-21!5;CL:0002028!3.43e-21!5;CL:0000163!4.64e-12!9 | |ontology_enrichment_celltype=CL:0002274!3.43e-21!5;CL:0000457!3.43e-21!5;CL:0002191!3.43e-21!5;CL:0000097!3.43e-21!5;CL:0000831!3.43e-21!5;CL:0002028!3.43e-21!5;CL:0000163!4.64e-12!9 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;8.28e-14;2!UBERON:0009117;4.89e-11;10!UBERON:0005564;4.89e-11;10!UBERON:0003056;1.67e-09;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!9.02e-25!2;UBERON:0002757!9.02e-25!2;UBERON:0010134!9.02e-25!2;UBERON:0002784!9.02e-25!2;UBERON:0005408!9.02e-25!2;UBERON:0001899!9.02e-25!2;UBERON:0001301!2.06e-13!1;UBERON:0003296!6.84e-13!4;UBERON:0010133!6.84e-13!4;UBERON:0003135!1.71e-10!11;UBERON:0003101!5.97e-09!22;UBERON:0000079!5.97e-09!22;UBERON:0001894!9.56e-08!7;UBERON:0006222!9.56e-08!7;UBERON:0007023!2.89e-07!115;UBERON:0002360!3.70e-07!2;UBERON:0000094!3.70e-07!2;UBERON:0007645!3.70e-07!2;UBERON:0000473!5.54e-07!8 | |ontology_enrichment_uberon=UBERON:0001905!9.02e-25!2;UBERON:0002757!9.02e-25!2;UBERON:0010134!9.02e-25!2;UBERON:0002784!9.02e-25!2;UBERON:0005408!9.02e-25!2;UBERON:0001899!9.02e-25!2;UBERON:0001301!2.06e-13!1;UBERON:0003296!6.84e-13!4;UBERON:0010133!6.84e-13!4;UBERON:0003135!1.71e-10!11;UBERON:0003101!5.97e-09!22;UBERON:0000079!5.97e-09!22;UBERON:0001894!9.56e-08!7;UBERON:0006222!9.56e-08!7;UBERON:0007023!2.89e-07!115;UBERON:0002360!3.70e-07!2;UBERON:0000094!3.70e-07!2;UBERON:0007645!3.70e-07!2;UBERON:0000473!5.54e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;6.61e-50;2!UBERON:0002757;6.61e-50;2!UBERON:0010134;6.61e-50;2!UBERON:0005408;6.61e-50;2!UBERON:0001899;6.61e-50;2!UBERON:0001301;3.58e-26;1!UBERON:0003296;1.43e-25;4!UBERON:0010133;1.43e-25;4!UBERON:0002784;1.43e-25;4!UBERON:0003135;3.79e-21;11!UBERON:0001894;4.37e-15;7!UBERON:0000473;1.51e-13;8!UBERON:0003101;6.05e-11;22!UBERON:0000079;6.05e-11;22!UBERON:0006947;1.19e-09;3!UBERON:0004054;1.19e-09;3!UBERON:0005904;1.49e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,6.61e-50,2;UBERON:0002757,6.61e-50,2;UBERON:0010134,6.61e-50,2;UBERON:0005408,6.61e-50,2;UBERON:0001899,6.61e-50,2;UBERON:0001301,3.58e-26,1;UBERON:0003296,1.43e-25,4;UBERON:0010133,1.43e-25,4;UBERON:0002784,1.43e-25,4;UBERON:0003135,3.79e-21,11;UBERON:0001894,4.37e-15,7;UBERON:0006222,4.37e-15,7;UBERON:0000473,1.51e-13,8;UBERON:0003101,6.05e-11,22;UBERON:0000079,6.05e-11,22;UBERON:0006947,1.19e-09,3;UBERON:0004054,1.19e-09,3;UBERON:0007023,6.23e-08,114;UBERON:0005904,1.49e-07,4 | |||
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|short_description=p1@DEFB119 | |short_description=p1@DEFB119 | ||
}} | }} |
Latest revision as of 00:19, 25 September 2015
Short description: | p1@DEFB119 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DEFB119_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 17bp_to_ENST00000492344_5end |
EntrezGene: | DEFB119 |
HGNC: | 18099 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 6.61e-50 | 2 |
regional part of epithalamus | 6.61e-50 | 2 |
secretory circumventricular organ | 6.61e-50 | 2 |
circumventricular organ | 6.61e-50 | 2 |
epithalamus | 6.61e-50 | 2 |
epididymis | 3.58e-26 | 1 |
gland of diencephalon | 1.43e-25 | 4 |
neuroendocrine gland | 1.43e-25 | 4 |
regional part of diencephalon | 1.43e-25 | 4 |
male reproductive organ | 3.79e-21 | 11 |
diencephalon | 4.37e-15 | 7 |
future diencephalon | 4.37e-15 | 7 |
testis | 1.51e-13 | 8 |
male organism | 6.05e-11 | 22 |
male reproductive system | 6.05e-11 | 22 |
male genital duct | 1.19e-09 | 3 |
internal male genitalia | 1.19e-09 | 3 |
adult organism | 6.23e-08 | 114 |
duct of male reproductive system | 1.49e-07 | 4 |