FFCP PHASE1:Hg19::chr3:137728985..137729022,+: Difference between revisions
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|id=chr3:137728985..137729022,+
|short_description=p1@CLDN18
|description=CAGE_peak_1_at_CLDN18_5end
|association_with_transcript=0bp_to_NM_016369,uc003erp.1,uc010h...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51208 | |EntrezGene=51208 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2039 | |HGNC=2039 | ||
|TSSclassifier=strong | |||
|UniProt=P56856 | |UniProt=P56856 | ||
|association_with_transcript=0bp_to_NM_016369,uc003erp.1,uc010hue.1_5end | |||
|cluster_id=chr3:137728985..137729022,+ | |||
|coexpression_cluster_id=C131 | |||
|description=CAGE_peak_1_at_CLDN18_5end | |||
|id=chr3:137728985..137729022,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;1.03e-17;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002171!6.50e-09!1;UBERON:0006518!6.50e-09!1;UBERON:0008949!6.50e-09!1;UBERON:0000101!6.50e-09!1;UBERON:0002167!6.50e-09!1;UBERON:0002079!1.02e-08!1;UBERON:0002135!1.10e-08!1;UBERON:0002426!1.59e-08!1;UBERON:0003831!1.59e-08!1;UBERON:0003898!1.59e-08!1;UBERON:0004830!1.59e-08!1;UBERON:0001774!1.59e-08!1;UBERON:0003830!1.59e-08!1;UBERON:0005175!1.59e-08!1;UBERON:0003897!1.59e-08!1;UBERON:0001103!1.59e-08!1;UBERON:0010084!1.59e-08!1;UBERON:0001301!2.64e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;3.75e-18;1!UBERON:0006518;3.75e-18;1!UBERON:0008949;3.75e-18;1!UBERON:0000101;3.75e-18;1!UBERON:0002167;3.75e-18;1!UBERON:0002079;1.03e-17;1!UBERON:0002135;1.44e-17;1!UBERON:0002081;1.57e-09;2!UBERON:0002133;1.86e-09;2!UBERON:0002048;1.62e-07;22!UBERON:0000117;1.62e-07;22!UBERON:0000171;1.62e-07;22!UBERON:0000170;1.62e-07;22!UBERON:0004151;9.12e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,3.75e-18,1;UBERON:0006518,3.75e-18,1;UBERON:0008949,3.75e-18,1;UBERON:0000101,3.75e-18,1;UBERON:0002167,3.75e-18,1;UBERON:0002079,1.03e-17,1;UBERON:0002135,1.22e-17,1;UBERON:0002081,1.57e-09,2;UBERON:0010227,1.57e-09,2;UBERON:0002133,1.71e-09,2;UBERON:0002048,1.62e-07,22;UBERON:0000117,1.62e-07,22;UBERON:0000171,1.62e-07,22;UBERON:0000170,1.62e-07,22;UBERON:0005597,1.62e-07,22;UBERON:0000118,1.62e-07,22;UBERON:0004151,9.12e-07,3;UBERON:0003978,9.64e-07,3;UBERON:0009751,9.64e-07,3;UBERON:0000946,9.64e-07,3;UBERON:0002523,9.64e-07,3;UBERON:0005983,9.64e-07,3;UBERON:0002165,9.64e-07,3;UBERON:0002062,9.64e-07,3;UBERON:0007280,9.64e-07,3 | |||
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|short_description=p1@CLDN18 | |||
}} | }} |
Latest revision as of 00:26, 25 September 2015
Short description: | p1@CLDN18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CLDN18_5end |
Coexpression cluster: | C131_lung_trachea_Alveolar_thyroid_umbilical_throat_skin |
Association with transcript: | 0bp_to_NM_016369, uc003erp.1, uc010hue.1_5end |
EntrezGene: | CLDN18 |
HGNC: | 2039 |
UniProt: | P56856 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 3.75e-18 | 1 |
right lung lobe | 3.75e-18 | 1 |
lower lobe of lung | 3.75e-18 | 1 |
lobe of lung | 3.75e-18 | 1 |
right lung | 3.75e-18 | 1 |
left cardiac atrium | 1.03e-17 | 1 |
mitral valve | 1.22e-17 | 1 |
cardiac atrium | 1.57e-09 | 2 |
future cardiac atrium | 1.57e-09 | 2 |
atrioventricular valve | 1.71e-09 | 2 |
lung | 1.62e-07 | 22 |
respiratory tube | 1.62e-07 | 22 |
respiration organ | 1.62e-07 | 22 |
pair of lungs | 1.62e-07 | 22 |
lung primordium | 1.62e-07 | 22 |
lung bud | 1.62e-07 | 22 |
cardiac chamber | 9.12e-07 | 3 |
valve | 9.64e-07 | 3 |
cardiac mesenchyme | 9.64e-07 | 3 |
cardial valve | 9.64e-07 | 3 |
tunica intima | 9.64e-07 | 3 |
heart layer | 9.64e-07 | 3 |
endocardium | 9.64e-07 | 3 |
endocardial cushion | 9.64e-07 | 3 |
presumptive endocardium | 9.64e-07 | 3 |