FFCP PHASE1:Hg19::chr1:212873162..212873188,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55509 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28915 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NR55 | |||
|association_with_transcript=138bp_to_ENST00000243440,NM_018664,uc001hjl.1_5end | |||
|cluster_id=chr1:212873162..212873188,- | |||
|coexpression_cluster_id=C69 | |||
|description=CAGE_peak_3_at_BATF3_5end | |||
|id=chr1:212873162..212873188,- | |||
|ontology_enrichment_celltype=CL:0002057!1.06e-13!42;CL:0000860!4.48e-12!45;CL:0000738!1.18e-11!140;CL:0000557!2.07e-11!71;CL:0002009!2.63e-11!65;CL:0000766!2.84e-11!76;CL:0002087!4.06e-11!119;CL:0002194!4.42e-11!63;CL:0000576!4.42e-11!63;CL:0000040!4.42e-11!63;CL:0000559!4.42e-11!63;CL:0000839!7.68e-11!70;CL:0002031!1.31e-10!124;CL:0000988!5.15e-10!182;CL:0000037!2.17e-09!172;CL:0000566!2.17e-09!172;CL:0002032!3.38e-09!165;CL:0000837!3.38e-09!165;CL:0002393!6.60e-09!9;CL:0002397!6.60e-09!9;CL:0000763!1.13e-08!112;CL:0000049!1.13e-08!112 | |||
|ontology_enrichment_celltype_v019=CL:0000840;7.25e-09;5!CL:0000875;5.15e-08;3!CL:0002396;5.15e-08;3!CL:0002127;8.72e-07;1!CL:0000911;8.72e-07;1!CL:0000814;8.72e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,5.94e-14,115;CL:0000988,1.67e-13,177;CL:0002031,3.40e-13,120;CL:0000738,1.47e-12,136;CL:0002032,3.90e-11,161;CL:0000837,3.90e-11,161;CL:0000037,1.77e-10,168;CL:0002194,3.07e-10,59;CL:0000576,3.07e-10,59;CL:0000040,3.07e-10,59;CL:0000559,3.07e-10,59;CL:0002009,7.81e-10,61;CL:0000766,1.44e-09,72;CL:0002393,1.83e-09,9;CL:0002397,1.83e-09,9;CL:0000839,6.29e-09,66;CL:0000840,6.98e-09,5;CL:0001029,6.98e-09,5;CL:0000557,9.20e-09,67;CL:0000875,4.72e-08,3;CL:0002396,4.72e-08,3;CL:0000473,2.88e-07,48;CL:0000234,2.88e-07,48;CL:0000860,9.53e-07,42;CL:0002057,9.53e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;5.22e-09;10!DOID:0060060;5.42e-07;1!DOID:0060061;5.42e-07;1!DOID:8691;5.42e-07;1!DOID:4960;6.42e-07;1!DOID:0070004;6.42e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,4.81e-09,10;DOID:0060060,5.43e-07,1;DOID:0060061,5.43e-07,1;DOID:8691,5.43e-07,1;DOID:4960,6.08e-07,1;DOID:0070004,6.08e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.03e-13!102;UBERON:0003061!1.03e-13!102;UBERON:0002193!3.11e-12!112;UBERON:0001474!3.20e-10!86;UBERON:0002371!3.80e-10!80;UBERON:0007023!2.26e-09!115;UBERON:0004765!8.22e-09!101;UBERON:0001434!8.22e-09!101;UBERON:0002405!7.18e-08!115;UBERON:0000479!2.28e-07!787 | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;8.72e-07;1!UBERON:0005208;8.72e-07;1!UBERON:0004145;8.72e-07;1!UBERON:0005946;8.72e-07;1!UBERON:0005965;8.72e-07;1!UBERON:0002078;8.72e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.80e-13,98;UBERON:0003061,1.80e-13,98;UBERON:0002193,7.05e-12,108;UBERON:0002405,2.10e-09,93;UBERON:0002371,6.20e-09,76;UBERON:0001474,4.19e-08,82;UBERON:0004765,3.59e-07,90;UBERON:0002134,9.48e-07,1;UBERON:0005208,9.48e-07,1;UBERON:0005946,9.48e-07,1;UBERON:0005965,9.48e-07,1;UBERON:0002078,9.48e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0.125542639594803,0.687720651731561,1.06730766284929,0.708397031823113,0,0,0.154816123316076,0,0,0,0,0,0,1.66198622559563,1.00272223735071,0.651032612147555,0,0,0,0,0,0.242584061187816,0.232429036905685,0,0.619412741790207,0.28769239232215,0.256160706529101,0.945928919554341,0,0,1.35426486594342,0,0,0.224723484445085,0,0,0.639337125799041,1.64925650093358,0.398927315243264,0.426224750532694,0.870627715885752,0.56738522469114,1.86846674698672,0.502497330513487,0,0.434377689410233,1.21079900526674,0.368277635987565,0.949387162322653,0.422510572623884,0.637812899895131,0.838634582033504,0.22465726229299,0,0,2.56511469367124,0.19891667719909,1.46131323011707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,2.59637914923747,4.35324343248168,4.38761269712255,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.75560528296651,0,0,0.25326102332916,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0.23486899728753,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0.375355559615893,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0.168584690078102,0,0.110293972732394,0.217879444092406,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.432359860250884,0.12624243342638,0,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,2.12961773587702,0.197030760201927,0,0.128343036279748,0,0,0,0.167516265334349,1.91381625495949,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0.206768026122887,0.215714200818617,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0.177561725313127,0.246381468041427,0,0.116210378459959,0,0,0,0,0,0,0,0,0,1.46139224653261,0,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0.27470839445503,0.082509499920588,0,0,0,0.096670718292122,0.154048617114644,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0.196498082026242,0,0,0,0.329294892959902,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0.476463550915578,0,0,0,0,0,0,0,0,0,0,0.318852545457645,0,0,0.423347165447766,0,0,0,0.156679895773023,2.50634477090067,0,0,0,0,0,0,0,0,0.586164286206121,0,0,0,0,0,0,0.146508179271894,0,3.78907506543426,0,0,0,0.307160702099232,1.9882952955326,0.422008249231538,0,218.859544973137,0,0.19924798825107,0.276283915531148,0,0,0.246169610922139,0,0,0,0.511572370226872,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0.1137934482855,0,0,0.344743373241465,0,0,0,0.361789315876224,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0,0.533034776018635,0,0.31396051279005,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,1.22206028986725,46.8503383315383,47.6956804333501,42.3953114992149,0.067401132980677,0.802577647298789,0.937057782901357,0,0,0.242780379534093,0,1.20990716048664,0,0.189559738885464,0.450970258243478,0,0,0.330991955875499,0.941798755221676,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0.19871461170299,0,0,0,0.426905989478705,1.19885765749278,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,21.2938756966245,0.837847203816763,0,2.15361907373044,0,0,0,0,0.360299883542404,0,0,0,0.0674035438541849,0,1.6087933092499,1.59045937961861,0.272406812223151,0,0,0,0,0.77380195455795,0.121499113316049,0,0.157611414598396,0.104909176269996,0,0,0,0,0,0,0,0,0.326587360109409,2.39460383124975,0.410462603746695,0,0.113312091520126,0.146552233678082,0,0.517131825446202,0.52893040697076,0.342173675768659,0,0.213574825135389,0,0,0.496166021811951,0,0.121792598380896,0,0.544017803369474,0.5013797880454,0.306345576763462,0,0,1.77213635993397,0.366078794705889,0.1251909307065,0,0.332787154610557,0.124192805882767,0,0,0,0,0,0,0,0,0.233713309847224,0.554805861502613,0.189403005275089,0,0,0,0,0,0,0.318593534327405,0,0.465788870628778,0,0,0,0,0,0,0.363697318405119,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0.521988583930423,0,0,0,0.358177682162975,0,0,0.176689145945881,0,0.337884881306145,0,0,0,0,0,0.132864840313363,0.327130788511688,0,0,0,19.3987773979282,0,4.64980445084202,0,0.736423801007363,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.321146125482298,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0.0752103283492573,0,0,0,0.49131575253029,0,0.0675375846183947,0,0.206686796501184,0.126831620387814,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0.135939465953663,0.0657727735628491,0,0.111231401892069,0.078493092850514,0.471346769748006,0,0.913158720509496,0,0,0,0,0,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| |||
|short_description=p3@BATF3 | |||
}} |
Latest revision as of 00:42, 25 September 2015
Short description: | p3@BATF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BATF3_5end |
Coexpression cluster: | C69_anaplastic_CD14_cord_hairy_mycosis_adult_NK |
Association with transcript: | 138bp_to_ENST00000243440, NM_018664, uc001hjl.1_5end |
EntrezGene: | BATF3 |
HGNC: | 28915 |
UniProt: | Q9NR55 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 5.94e-14 | 115 |
hematopoietic cell | 1.67e-13 | 177 |
hematopoietic lineage restricted progenitor cell | 3.40e-13 | 120 |
leukocyte | 1.47e-12 | 136 |
hematopoietic oligopotent progenitor cell | 3.90e-11 | 161 |
hematopoietic multipotent progenitor cell | 3.90e-11 | 161 |
hematopoietic stem cell | 1.77e-10 | 168 |
monopoietic cell | 3.07e-10 | 59 |
monocyte | 3.07e-10 | 59 |
monoblast | 3.07e-10 | 59 |
promonocyte | 3.07e-10 | 59 |
macrophage dendritic cell progenitor | 7.81e-10 | 61 |
myeloid leukocyte | 1.44e-09 | 72 |
intermediate monocyte | 1.83e-09 | 9 |
CD14-positive, CD16-positive monocyte | 1.83e-09 | 9 |
myeloid lineage restricted progenitor cell | 6.29e-09 | 66 |
immature conventional dendritic cell | 6.98e-09 | 5 |
common dendritic progenitor | 6.98e-09 | 5 |
granulocyte monocyte progenitor cell | 9.20e-09 | 67 |
non-classical monocyte | 4.72e-08 | 3 |
CD14-low, CD16-positive monocyte | 4.72e-08 | 3 |
defensive cell | 2.88e-07 | 48 |
phagocyte | 2.88e-07 | 48 |
classical monocyte | 9.53e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.53e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.80e-13 | 98 |
blood island | 1.80e-13 | 98 |
hemolymphoid system | 7.05e-12 | 108 |
immune system | 2.10e-09 | 93 |
bone marrow | 6.20e-09 | 76 |
bone element | 4.19e-08 | 82 |
skeletal element | 3.59e-07 | 90 |
tricuspid valve | 9.48e-07 | 1 |
right atrium valve | 9.48e-07 | 1 |
outflow tract of atrium | 9.48e-07 | 1 |
outflow part of right atrium | 9.48e-07 | 1 |
right cardiac atrium | 9.48e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 4.81e-09 | 10 |
non-Hodgkin lymphoma | 5.43e-07 | 1 |
cutaneous T cell lymphoma | 5.43e-07 | 1 |
mycosis fungoides | 5.43e-07 | 1 |
bone marrow cancer | 6.08e-07 | 1 |
myeloma | 6.08e-07 | 1 |