FFCP PHASE1:Hg19::chr16:2034649..2034664,+: Difference between revisions
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|id=chr16:2034649..2034664,+
|short_description=p11@GFER
|description=CAGE_peak_11_at_GFER_5end
|association_with_transcript=-47bp_to_uc002coc.2_5end
|EntrezGene=2...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2671 | |EntrezGene=2671 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4236 | |HGNC=4236 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-47bp_to_uc002coc.2_5end | |||
|cluster_id=chr16:2034649..2034664,+ | |||
|coexpression_cluster_id=C201 | |||
|description=CAGE_peak_11_at_GFER_5end | |||
|id=chr16:2034649..2034664,+ | |||
|ontology_enrichment_celltype=CL:0002537!3.23e-09!5 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.65e-08;12!CL:0000306;9.10e-07;4!CL:0002222;9.10e-07;4!CL:0002224;9.10e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.75e-08,12;CL:0000306,8.61e-07,4;CL:0002222,8.61e-07,4;CL:0002224,8.61e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.63e-09;11!UBERON:0009497;9.84e-08;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;4.08e-20;17!UBERON:0002108;7.92e-19;4!UBERON:0005409;7.53e-16;22!UBERON:0001155;8.36e-11;9!UBERON:0004921;9.08e-11;33!UBERON:0000059;5.20e-09;11!UBERON:0010077;9.10e-07;4!UBERON:0005389;9.10e-07;4!UBERON:0000484;9.10e-07;4!UBERON:0000965;9.10e-07;4!UBERON:0001803;9.10e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.70e-20,17;UBERON:0002108,8.66e-19,4;UBERON:0005409,4.20e-14,25;UBERON:0001155,7.22e-11,9;UBERON:0000059,4.61e-09,11;UBERON:0010077,8.61e-07,4;UBERON:0005389,8.61e-07,4;UBERON:0000484,8.61e-07,4;UBERON:0002546,8.61e-07,4;UBERON:0000965,8.61e-07,4;UBERON:0001803,8.61e-07,4;UBERON:0003073,8.61e-07,4;UBERON:0005426,8.61e-07,4 | |||
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|short_description=p11@GFER | |||
}} | }} |
Latest revision as of 01:57, 25 September 2015
Short description: | p11@GFER |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_GFER_5end |
Coexpression cluster: | C201_colon_small_adenocarcinoma_duodenum_temporal_signet_gall |
Association with transcript: | -47bp_to_uc002coc.2_5end |
EntrezGene: | GFER |
HGNC: | 4236 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.75e-08 | 12 |
crystallin accumulating cell | 8.61e-07 | 4 |
vertebrate lens cell | 8.61e-07 | 4 |
lens epithelial cell | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.70e-20 | 17 |
small intestine | 8.66e-19 | 4 |
gastrointestinal system | 4.20e-14 | 25 |
colon | 7.22e-11 | 9 |
large intestine | 4.61e-09 | 11 |
cuboidal epithelium | 8.61e-07 | 4 |
transparent eye structure | 8.61e-07 | 4 |
simple cuboidal epithelium | 8.61e-07 | 4 |
cranial placode | 8.61e-07 | 4 |
lens of camera-type eye | 8.61e-07 | 4 |
epithelium of lens | 8.61e-07 | 4 |
lens placode | 8.61e-07 | 4 |
lens vesicle | 8.61e-07 | 4 |