FFCP PHASE1:Hg19::chr7:107883776..107883779,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4897 | |EntrezGene=4897 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7994 | |HGNC=7994 | ||
|TSSclassifier=strong | |||
|UniProt=C9JH43 | |UniProt=C9JH43 | ||
|association_with_transcript=-92bp_to_ENST00000417701_5end | |association_with_transcript=-92bp_to_ENST00000417701_5end | ||
|cluster_id=chr7:107883776..107883779,- | |||
|coexpression_cluster_id=C445 | |||
|description=CAGE_peak_37_at_NRCAM_5end | |description=CAGE_peak_37_at_NRCAM_5end | ||
|id=chr7:107883776..107883779,- | |id=chr7:107883776..107883779,- | ||
|ontology_enrichment_celltype=CL:0000064!1.40e-14!3;CL:0005012!1.40e-14!3;CL:0000067!1.40e-14!3;CL:0002304!1.40e-14!3;CL:0000306!3.10e-11!4;CL:0002222!3.10e-11!4;CL:0002224!3.10e-11!4;CL:0000075!6.82e-07!27 | |ontology_enrichment_celltype=CL:0000064!1.40e-14!3;CL:0005012!1.40e-14!3;CL:0000067!1.40e-14!3;CL:0002304!1.40e-14!3;CL:0000306!3.10e-11!4;CL:0002222!3.10e-11!4;CL:0002224!3.10e-11!4;CL:0000075!6.82e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000082;6.95e-12;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000082,6.95e-12,19 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.67e-08;29!UBERON:0001041;4.53e-08;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1324;1.22e-14;15!DOID:0050615;8.02e-14;16 | |||
|ontology_enrichment_disease_v019_2=DOID:1324,1.22e-14,15;DOID:0050615,8.02e-14,16 | |||
|ontology_enrichment_uberon=UBERON:0007625!1.88e-15!11;UBERON:0001778!1.40e-14!3;UBERON:0001775!1.40e-14!3;UBERON:0001896!1.83e-14!3;UBERON:0005290!1.83e-14!3;UBERON:0010096!1.83e-14!3;UBERON:0001801!2.24e-12!14;UBERON:0000488!2.80e-11!4;UBERON:0010077!3.10e-11!4;UBERON:0005389!3.10e-11!4;UBERON:0000484!3.10e-11!4;UBERON:0002546!3.10e-11!4;UBERON:0000965!3.10e-11!4;UBERON:0001803!3.10e-11!4;UBERON:0003073!3.10e-11!4;UBERON:0005426!3.10e-11!4;UBERON:0000019!2.17e-09!19;UBERON:0000047!2.17e-09!19;UBERON:0004088!2.17e-09!19;UBERON:0003072!2.17e-09!19;UBERON:0003071!2.17e-09!19;UBERON:0004128!2.17e-09!19;UBERON:0000970!5.70e-09!20;UBERON:0002104!1.37e-08!21;UBERON:0001456!1.37e-08!21;UBERON:0002203!5.92e-08!6;UBERON:0001768!5.92e-08!6;UBERON:0003075!6.20e-08!86;UBERON:0007284!6.20e-08!86;UBERON:0000020!6.29e-08!23;UBERON:0001032!1.23e-07!24;UBERON:0004456!1.23e-07!24;UBERON:0002346!1.31e-07!90;UBERON:0000063!3.33e-07!97;UBERON:0001894!6.39e-07!7;UBERON:0006222!6.39e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0004802;6.95e-12;19!UBERON:0000115;6.95e-12;19!UBERON:0002048;1.80e-10;22!UBERON:0004807;1.80e-10;22!UBERON:0000117;1.80e-10;22!UBERON:0000171;1.80e-10;22!UBERON:0000170;1.80e-10;22!UBERON:0005181;4.53e-08;35!UBERON:0005911;2.32e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004802,6.95e-12,19;UBERON:0000115,6.95e-12,19;UBERON:0002048,1.80e-10,22;UBERON:0000117,1.80e-10,22;UBERON:0000171,1.80e-10,22;UBERON:0000170,1.80e-10,22;UBERON:0005597,1.80e-10,22;UBERON:0000118,1.80e-10,22;UBERON:0004807,1.52e-08,28;UBERON:0005178,2.74e-07,34;UBERON:0002224,2.74e-07,34;UBERON:0005181,4.03e-07,35;UBERON:0005153,8.21e-07,37 | |||
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|short_description=p37@NRCAM | |short_description=p37@NRCAM | ||
}} | }} |
Latest revision as of 02:40, 25 September 2015
Short description: | p37@NRCAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_37_at_NRCAM_5end |
Coexpression cluster: | C445_lung_Lens_Ciliary_diencephalon_thalamus_bile_hepatoma |
Association with transcript: | -92bp_to_ENST00000417701_5end |
EntrezGene: | NRCAM |
HGNC: | 7994 |
UniProt: | C9JH43 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of lung | 6.95e-12 | 19 |
Ontology term | p-value | n |
---|---|---|
respiratory tract epithelium | 6.95e-12 | 19 |
lung epithelium | 6.95e-12 | 19 |
lung | 1.80e-10 | 22 |
respiratory tube | 1.80e-10 | 22 |
respiration organ | 1.80e-10 | 22 |
pair of lungs | 1.80e-10 | 22 |
lung primordium | 1.80e-10 | 22 |
lung bud | 1.80e-10 | 22 |
respiratory system epithelium | 1.52e-08 | 28 |
thoracic cavity element | 2.74e-07 | 34 |
thoracic cavity | 2.74e-07 | 34 |
thoracic segment organ | 4.03e-07 | 35 |
epithelial bud | 8.21e-07 | 37 |
Ontology term | p-value | n |
---|---|---|
lung cancer | 1.22e-14 | 15 |
respiratory system cancer | 8.02e-14 | 16 |