FFCP PHASE1:Hg19::chr2:228028849..228028858,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1286 | |EntrezGene=1286 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2206 | |HGNC=2206 | ||
|TSSclassifier=strong | |||
|UniProt=P53420 | |UniProt=P53420 | ||
|association_with_transcript=-20bp_to_ENST00000329662,ENST00000396625_5end | |association_with_transcript=-20bp_to_ENST00000329662,ENST00000396625_5end | ||
|cluster_id=chr2:228028849..228028858,- | |||
|description=CAGE_peak_4_at_COL4A4_5end | |description=CAGE_peak_4_at_COL4A4_5end | ||
|id=chr2:228028849..228028858,- | |id=chr2:228028849..228028858,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000239;2.25e-12;3!CL:1000615;2.25e-12;3!CL:0002306;2.25e-12;3!CL:0000319;2.71e-10;1 | |ontology_enrichment_celltype_v019=CL:0000239;2.25e-12;3!CL:1000615;2.25e-12;3!CL:0002306;2.25e-12;3!CL:0000319;2.71e-10;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.00e-12,3;CL:1000615,3.00e-12,3;CL:0002306,3.00e-12,3;CL:0000319,2.84e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0005062;5.80e-10;4!UBERON:0007284;5.80e-10;4!UBERON:0003918;2.90e-08;10!UBERON:0007687;2.90e-08;10!UBERON:0003104;6.59e-07;31 | |ontology_enrichment_development_v019=UBERON:0005062;5.80e-10;4!UBERON:0007284;5.80e-10;4!UBERON:0003918;2.90e-08;10!UBERON:0007687;2.90e-08;10!UBERON:0003104;6.59e-07;31 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3030;2.71e-10;1 | |ontology_enrichment_disease_v019=DOID:3030;2.71e-10;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3030,2.84e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.80e-20!115;UBERON:0000477!2.52e-16!286;UBERON:0000025!6.83e-13!194;UBERON:0004111!4.63e-12!241;UBERON:0000481!3.04e-11!347;UBERON:0000062!9.00e-10!511;UBERON:0000064!9.94e-10!219;UBERON:0000483!3.63e-09!309;UBERON:0003103!3.91e-09!69;UBERON:0000119!7.53e-09!312;UBERON:0001048!7.11e-08!168;UBERON:0003075!7.70e-08!86;UBERON:0007284!7.70e-08!86;UBERON:0000468!2.69e-07!659;UBERON:0000922!3.84e-07!612;UBERON:0002346!4.53e-07!90;UBERON:0000475!5.89e-07!365;UBERON:0000480!6.23e-07!626;UBERON:0000923!7.32e-07!604;UBERON:0005291!7.32e-07!604;UBERON:0006598!7.32e-07!604;UBERON:0002532!7.32e-07!604;UBERON:0002050!8.64e-07!605;UBERON:0005423!8.64e-07!605;UBERON:0009569!8.91e-07!113 | |ontology_enrichment_uberon=UBERON:0007023!7.80e-20!115;UBERON:0000477!2.52e-16!286;UBERON:0000025!6.83e-13!194;UBERON:0004111!4.63e-12!241;UBERON:0000481!3.04e-11!347;UBERON:0000062!9.00e-10!511;UBERON:0000064!9.94e-10!219;UBERON:0000483!3.63e-09!309;UBERON:0003103!3.91e-09!69;UBERON:0000119!7.53e-09!312;UBERON:0001048!7.11e-08!168;UBERON:0003075!7.70e-08!86;UBERON:0007284!7.70e-08!86;UBERON:0000468!2.69e-07!659;UBERON:0000922!3.84e-07!612;UBERON:0002346!4.53e-07!90;UBERON:0000475!5.89e-07!365;UBERON:0000480!6.23e-07!626;UBERON:0000923!7.32e-07!604;UBERON:0005291!7.32e-07!604;UBERON:0006598!7.32e-07!604;UBERON:0002532!7.32e-07!604;UBERON:0002050!8.64e-07!605;UBERON:0005423!8.64e-07!605;UBERON:0009569!8.91e-07!113 | ||
|ontology_enrichment_uberon_v019=UBERON:0002133;5.36e-19;2!UBERON:0003978;5.50e-13;3!UBERON:0000946;5.50e-13;3!UBERON:0006947;5.50e-13;3!UBERON:0004054;5.50e-13;3!UBERON:0006853;2.25e-12;3!UBERON:0007685;2.25e-12;3!UBERON:0004134;2.25e-12;3!UBERON:0001000;1.89e-10;1!UBERON:0002134;1.89e-10;1!UBERON:0005208;1.89e-10;1!UBERON:0004145;1.89e-10;1!UBERON:0005946;1.89e-10;1!UBERON:0005352;1.89e-10;1!UBERON:0005965;1.89e-10;1!UBERON:0002078;1.89e-10;1!UBERON:0002135;2.71e-10;1!UBERON:0001301;2.71e-10;1!UBERON:0005904;5.80e-10;4!UBERON:0002171;6.61e-10;1!UBERON:0006518;6.61e-10;1!UBERON:0008949;6.61e-10;1!UBERON:0000101;6.61e-10;1!UBERON:0002167;6.61e-10;1!UBERON:0003296;1.66e-09;4!UBERON:0010133;1.66e-09;4!UBERON:0002113;8.65e-09;24!UBERON:0011143;8.65e-09;24!UBERON:0000489;3.03e-07;29!UBERON:0006554;5.36e-07;30!UBERON:0001008;5.36e-07;30 | |ontology_enrichment_uberon_v019=UBERON:0002133;5.36e-19;2!UBERON:0003978;5.50e-13;3!UBERON:0000946;5.50e-13;3!UBERON:0006947;5.50e-13;3!UBERON:0004054;5.50e-13;3!UBERON:0006853;2.25e-12;3!UBERON:0007685;2.25e-12;3!UBERON:0004134;2.25e-12;3!UBERON:0001000;1.89e-10;1!UBERON:0002134;1.89e-10;1!UBERON:0005208;1.89e-10;1!UBERON:0004145;1.89e-10;1!UBERON:0005946;1.89e-10;1!UBERON:0005352;1.89e-10;1!UBERON:0005965;1.89e-10;1!UBERON:0002078;1.89e-10;1!UBERON:0002135;2.71e-10;1!UBERON:0001301;2.71e-10;1!UBERON:0005904;5.80e-10;4!UBERON:0002171;6.61e-10;1!UBERON:0006518;6.61e-10;1!UBERON:0008949;6.61e-10;1!UBERON:0000101;6.61e-10;1!UBERON:0002167;6.61e-10;1!UBERON:0003296;1.66e-09;4!UBERON:0010133;1.66e-09;4!UBERON:0002113;8.65e-09;24!UBERON:0011143;8.65e-09;24!UBERON:0000489;3.03e-07;29!UBERON:0006554;5.36e-07;30!UBERON:0001008;5.36e-07;30 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002133,4.91e-19,2;UBERON:0003978,5.19e-13,3;UBERON:0009751,5.19e-13,3;UBERON:0000946,5.19e-13,3;UBERON:0002523,5.19e-13,3;UBERON:0005983,5.19e-13,3;UBERON:0002165,5.19e-13,3;UBERON:0002062,5.19e-13,3;UBERON:0007280,5.19e-13,3;UBERON:0006947,6.20e-13,3;UBERON:0004054,6.20e-13,3;UBERON:0006853,3.00e-12,3;UBERON:0007685,3.00e-12,3;UBERON:0004134,3.00e-12,3;UBERON:0002113,1.73e-11,26;UBERON:0003918,1.73e-11,26;UBERON:0011143,1.73e-11,26;UBERON:0005095,1.73e-11,26;UBERON:0007687,1.73e-11,26;UBERON:0002134,1.80e-10,1;UBERON:0005208,1.80e-10,1;UBERON:0005946,1.80e-10,1;UBERON:0005965,1.80e-10,1;UBERON:0002078,1.80e-10,1;UBERON:0001000,1.98e-10,1;UBERON:0005352,1.98e-10,1;UBERON:0002135,2.59e-10,1;UBERON:0001301,3.10e-10,1;UBERON:0005904,6.34e-10,4;UBERON:0002171,6.91e-10,1;UBERON:0006518,6.91e-10,1;UBERON:0008949,6.91e-10,1;UBERON:0000101,6.91e-10,1;UBERON:0002167,6.91e-10,1;UBERON:0003296,1.17e-09,4;UBERON:0010133,1.17e-09,4;UBERON:0000489,1.45e-09,31;UBERON:0003103,4.78e-09,68 | |||
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|short_description=p4@COL4A4 | |short_description=p4@COL4A4 | ||
}} | }} |
Latest revision as of 03:33, 25 September 2015
Short description: | p4@COL4A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_COL4A4_5end |
Coexpression cluster: | NA |
Association with transcript: | -20bp_to_ENST00000329662, ENST00000396625_5end |
EntrezGene: | COL4A4 |
HGNC: | 2206 |
UniProt: | P53420 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.00e-12 | 3 |
kidney cortex tubule cell | 3.00e-12 | 3 |
epithelial cell of proximal tubule | 3.00e-12 | 3 |
mucus secreting cell | 2.84e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 2.84e-10 | 1 |