FFCP PHASE1:Mm9::chr14:102240011..102240026,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=380928 | |EntrezGene=380928 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-9bp_to_ENSMUST00000159948_5end | |association_with_transcript=-9bp_to_ENSMUST00000159948_5end | ||
|cluster_id=chr14:102240011..102240026,+ | |||
|description=CAGE_peak_6_at_Lmo7_5end | |description=CAGE_peak_6_at_Lmo7_5end | ||
|id=chr14:102240011..102240026,+ | |id=chr14:102240011..102240026,+ | ||
|ontology_enrichment_celltype=CL:0002563!3.28e-07!9;CL:0002251!3.28e-07!9 | |ontology_enrichment_celltype=CL:0002563!3.28e-07!9;CL:0002251!3.28e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.96e-09,9;CL:0002251,4.96e-09,9;CL:0002076,2.23e-07,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.58e-12!43;UBERON:0005409!3.27e-12!59;UBERON:0000344!2.45e-11!15;UBERON:0001007!6.85e-10!128;UBERON:0001555!6.85e-10!128;UBERON:0007026!6.85e-10!128;UBERON:0001242!8.13e-10!13;UBERON:0000060!8.13e-10!13;UBERON:0001262!8.13e-10!13;UBERON:0004786!8.13e-10!13;UBERON:0004119!2.76e-09!130;UBERON:0000925!2.76e-09!130;UBERON:0006595!2.76e-09!130;UBERON:0004921!6.16e-09!126;UBERON:0004185!6.16e-09!126;UBERON:0003350!3.28e-07!9;UBERON:0004808!3.28e-07!9;UBERON:0001277!3.28e-07!9;UBERON:0005178!8.83e-07!17;UBERON:0005181!8.83e-07!17;UBERON:0002224!8.83e-07!17;UBERON:0000915!8.83e-07!17;UBERON:0008947!8.83e-07!17;UBERON:0003258!8.83e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.18e-22,31;UBERON:0005409,5.15e-20,47;UBERON:0000344,1.78e-14,15;UBERON:0001242,1.82e-12,13;UBERON:0001262,1.82e-12,13;UBERON:0004786,1.82e-12,13;UBERON:0001007,2.11e-11,116;UBERON:0001555,2.11e-11,116;UBERON:0007026,2.11e-11,116;UBERON:0004119,6.81e-11,118;UBERON:0000925,6.81e-11,118;UBERON:0006595,6.81e-11,118;UBERON:0004921,3.43e-10,114;UBERON:0003350,4.96e-09,9;UBERON:0004808,4.96e-09,9;UBERON:0001277,4.96e-09,9;UBERON:0004923,6.41e-08,24;UBERON:0005178,2.29e-07,17;UBERON:0005181,2.29e-07,17;UBERON:0002224,2.29e-07,17;UBERON:0000915,2.29e-07,17;UBERON:0008947,2.29e-07,17;UBERON:0003258,2.29e-07,17;UBERON:0000485,7.94e-07,11 | |||
|phase1_expression=0,27.9180326111489,27.2999543633722,15.4256747766483,16.0286633582831,9.9048770428015,5.60670337429262,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,21.9189619226967,28.2173415712619,22.9692785646008,15.5074318617267,17.453169847557,16.3420140732482,6.30075324399827,11.9734475753865,0,0,0,13.8648777480612,7.81302833184914,9.18762103180661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0,1.15945795480671,0,0,0,0,0.896053774194671,2.10666630197628,0,0,0,0,0,0,0,3.89683873820185,3.54703811665138,2.52762222507392,5.1382745873577,0,0,0,0,0,0,0.117588707135705,0,3.95511948374998,0.144599356919912,0,0.647067399789637,0.220841518460394,0,9.31958806090611,0,0,11.240110429178,0,0,0,0,2.28750301409313,0.125654352112864,0.869121600961382,1.53429274398198,0,0.811206315338788,0,0.497627882440372,0,0.210441855886474,0,0.229902104433473,0,0.30140963567143,0.136072998302656,0.2562274405697,0.281105173679186,0.517406741478031,0,0,0,0.219195732427575,0.278047249225598,0.696504333044333,1.23469281844766,0,0,0,0,0,0.469052119962192,0.720248245844059,0,1.18058539048442,3.39387648352232,3.0229412817553,6.17028823219124,3.38619492864792,3.62031669809657,5.41752631461014,7.21512404958116,7.30999937126662,4.83010253640311,3.62357330653004,1.26173969138476,0.102904612379284,41.3023478729747,10.5780226665418,0,0.232236671860439,1.41754207454303,3.83198696784351,6.44896327150124,3.99473814836374,22.302865892592,6.58795818896044,4.77536896720512,10.9426059622633,11.307917052909,24.268124033664,19.4524244887225,16.3295844068581,0,0,0,0.203651327845314,0.581857461502877,0.280543279561274,0.505892296994058,1.03327103585722,1.255989822731,0.987177311374404,0.296452627087149,0,0,0.224862112384854,0.202860121388503,0.241177159752417,0.763877555344259,1.15078454980324,0.162135226775035,0.274561413188081,0,0.372140947668503,0.624075346229121,0,0.358794827043824,0.482443521363367,4.61882975416512,0,0.325929952884052,0.678980343100753,2.34690248288502,16.7506257441816,18.3293603482231,20.4890330250689,4.41378403497335,6.64394068946325,2.39182152986231,6.55453258862952,3.28101465545202,7.08780387049407,0,0,0,0,0.160550589987792,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0.321321316421807,0.283880170416537,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0,0.943025398779491,0.590603785761546,0.922305443831782,1.55056975900933,0,0.356497378384721,0,0,0,1.02131881726136,0,0,0,0,0,0,0.608929898229199,0,0,2.64634077665954,0.98931751764888,0.807322133479528,0.542816324353403,0.835606408021955,0.492422699235184,16.6144076879015,0,0,0.206386867963223,0,0,0,0,0,0,0,2.86401185404534,0.158167996790568,0.203319467126849,2.37611749807963,4.18176592028937,3.71216358368502,2.56242258131159,4.29797969771747,6.80565449158477,12.3134224627203,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0.302899349844443,0.0762068066549998,0,0,0.288635524920988,0,5.66825959038028,0,0,0,0.386379188064381,1.12609485270709,0.36630324853453,2.57242054894879,1.50471631210609,0,0,0.572895513439397,1.3748254587495,0,1.5107877947794,0,0.900642406448441,0,0.51776031175182,0,0,0,1.21553358534147,0.419226325255965,0.367687016900028,1.77797382241292,1.44224540067226,1.92551525755089,2.52697211763797,1.52087579934144,2.45214243801899,5.15028291084353,3.64943368707755,3.84817642002609,3.81034953026459,2.0859178670074,3.08654752741928,4.12085900803307,1.03039244094078,2.05721551431249,2.66213709239006,4.05341522910446,2.0348498328526,3.76437521661322,3.55381353145041,3.65855945745545,1.57841826862706,4.07412341537585,0.561142271657738,2.01679530811096,2.26560309463796,1.63692417267876,2.32405261778949,1.92906610981141,0.999242311751784,2.57324769289949,1.50409737833809,1.14772999241306,0.441182838239031,0.463735671240843 | |phase1_expression=0,27.9180326111489,27.2999543633722,15.4256747766483,16.0286633582831,9.9048770428015,5.60670337429262,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,21.9189619226967,28.2173415712619,22.9692785646008,15.5074318617267,17.453169847557,16.3420140732482,6.30075324399827,11.9734475753865,0,0,0,13.8648777480612,7.81302833184914,9.18762103180661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0,1.15945795480671,0,0,0,0,0.896053774194671,2.10666630197628,0,0,0,0,0,0,0,3.89683873820185,3.54703811665138,2.52762222507392,5.1382745873577,0,0,0,0,0,0,0.117588707135705,0,3.95511948374998,0.144599356919912,0,0.647067399789637,0.220841518460394,0,9.31958806090611,0,0,11.240110429178,0,0,0,0,2.28750301409313,0.125654352112864,0.869121600961382,1.53429274398198,0,0.811206315338788,0,0.497627882440372,0,0.210441855886474,0,0.229902104433473,0,0.30140963567143,0.136072998302656,0.2562274405697,0.281105173679186,0.517406741478031,0,0,0,0.219195732427575,0.278047249225598,0.696504333044333,1.23469281844766,0,0,0,0,0,0.469052119962192,0.720248245844059,0,1.18058539048442,3.39387648352232,3.0229412817553,6.17028823219124,3.38619492864792,3.62031669809657,5.41752631461014,7.21512404958116,7.30999937126662,4.83010253640311,3.62357330653004,1.26173969138476,0.102904612379284,41.3023478729747,10.5780226665418,0,0.232236671860439,1.41754207454303,3.83198696784351,6.44896327150124,3.99473814836374,22.302865892592,6.58795818896044,4.77536896720512,10.9426059622633,11.307917052909,24.268124033664,19.4524244887225,16.3295844068581,0,0,0,0.203651327845314,0.581857461502877,0.280543279561274,0.505892296994058,1.03327103585722,1.255989822731,0.987177311374404,0.296452627087149,0,0,0.224862112384854,0.202860121388503,0.241177159752417,0.763877555344259,1.15078454980324,0.162135226775035,0.274561413188081,0,0.372140947668503,0.624075346229121,0,0.358794827043824,0.482443521363367,4.61882975416512,0,0.325929952884052,0.678980343100753,2.34690248288502,16.7506257441816,18.3293603482231,20.4890330250689,4.41378403497335,6.64394068946325,2.39182152986231,6.55453258862952,3.28101465545202,7.08780387049407,0,0,0,0,0.160550589987792,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0.321321316421807,0.283880170416537,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0,0.943025398779491,0.590603785761546,0.922305443831782,1.55056975900933,0,0.356497378384721,0,0,0,1.02131881726136,0,0,0,0,0,0,0.608929898229199,0,0,2.64634077665954,0.98931751764888,0.807322133479528,0.542816324353403,0.835606408021955,0.492422699235184,16.6144076879015,0,0,0.206386867963223,0,0,0,0,0,0,0,2.86401185404534,0.158167996790568,0.203319467126849,2.37611749807963,4.18176592028937,3.71216358368502,2.56242258131159,4.29797969771747,6.80565449158477,12.3134224627203,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0.302899349844443,0.0762068066549998,0,0,0.288635524920988,0,5.66825959038028,0,0,0,0.386379188064381,1.12609485270709,0.36630324853453,2.57242054894879,1.50471631210609,0,0,0.572895513439397,1.3748254587495,0,1.5107877947794,0,0.900642406448441,0,0.51776031175182,0,0,0,1.21553358534147,0.419226325255965,0.367687016900028,1.77797382241292,1.44224540067226,1.92551525755089,2.52697211763797,1.52087579934144,2.45214243801899,5.15028291084353,3.64943368707755,3.84817642002609,3.81034953026459,2.0859178670074,3.08654752741928,4.12085900803307,1.03039244094078,2.05721551431249,2.66213709239006,4.05341522910446,2.0348498328526,3.76437521661322,3.55381353145041,3.65855945745545,1.57841826862706,4.07412341537585,0.561142271657738,2.01679530811096,2.26560309463796,1.63692417267876,2.32405261778949,1.92906610981141,0.999242311751784,2.57324769289949,1.50409737833809,1.14772999241306,0.441182838239031,0.463735671240843 | ||
|short_description=p6@Lmo7 | |short_description=p6@Lmo7 | ||
}} | }} |
Latest revision as of 14:56, 25 September 2015
Short description: | p6@Lmo7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Lmo7_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -9bp_to_ENSMUST00000159948_5end |
EntrezGene: | Lmo7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.96e-09 | 9 |
epithelial cell of alimentary canal | 4.96e-09 | 9 |
endo-epithelial cell | 2.23e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.18e-22 | 31 |
gastrointestinal system | 5.15e-20 | 47 |
mucosa | 1.78e-14 | 15 |
intestinal mucosa | 1.82e-12 | 13 |
wall of intestine | 1.82e-12 | 13 |
gastrointestinal system mucosa | 1.82e-12 | 13 |
digestive system | 2.11e-11 | 116 |
digestive tract | 2.11e-11 | 116 |
primitive gut | 2.11e-11 | 116 |
endoderm-derived structure | 6.81e-11 | 118 |
endoderm | 6.81e-11 | 118 |
presumptive endoderm | 6.81e-11 | 118 |
subdivision of digestive tract | 3.43e-10 | 114 |
epithelium of mucosa | 4.96e-09 | 9 |
gastrointestinal system epithelium | 4.96e-09 | 9 |
intestinal epithelium | 4.96e-09 | 9 |
organ component layer | 6.41e-08 | 24 |
thoracic cavity element | 2.29e-07 | 17 |
thoracic segment organ | 2.29e-07 | 17 |
thoracic cavity | 2.29e-07 | 17 |
thoracic segment of trunk | 2.29e-07 | 17 |
respiratory primordium | 2.29e-07 | 17 |
endoderm of foregut | 2.29e-07 | 17 |
simple columnar epithelium | 7.94e-07 | 11 |