FFCP PHASE1:Mm9::chr14:102240011..102240026,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=380928 | |EntrezGene=380928 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-9bp_to_ENSMUST00000159948_5end | |association_with_transcript=-9bp_to_ENSMUST00000159948_5end | ||
|cluster_id=chr14:102240011..102240026,+ | |||
|description=CAGE_peak_6_at_Lmo7_5end | |description=CAGE_peak_6_at_Lmo7_5end | ||
|id=chr14:102240011..102240026,+ | |id=chr14:102240011..102240026,+ | ||
|ontology_enrichment_celltype=CL:0002563!3.28e-07!9;CL:0002251!3.28e-07!9 | |ontology_enrichment_celltype=CL:0002563!3.28e-07!9;CL:0002251!3.28e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.96e-09,9;CL:0002251,4.96e-09,9;CL:0002076,2.23e-07,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.58e-12!43;UBERON:0005409!3.27e-12!59;UBERON:0000344!2.45e-11!15;UBERON:0001007!6.85e-10!128;UBERON:0001555!6.85e-10!128;UBERON:0007026!6.85e-10!128;UBERON:0001242!8.13e-10!13;UBERON:0000060!8.13e-10!13;UBERON:0001262!8.13e-10!13;UBERON:0004786!8.13e-10!13;UBERON:0004119!2.76e-09!130;UBERON:0000925!2.76e-09!130;UBERON:0006595!2.76e-09!130;UBERON:0004921!6.16e-09!126;UBERON:0004185!6.16e-09!126;UBERON:0003350!3.28e-07!9;UBERON:0004808!3.28e-07!9;UBERON:0001277!3.28e-07!9;UBERON:0005178!8.83e-07!17;UBERON:0005181!8.83e-07!17;UBERON:0002224!8.83e-07!17;UBERON:0000915!8.83e-07!17;UBERON:0008947!8.83e-07!17;UBERON:0003258!8.83e-07!17 | |ontology_enrichment_uberon=UBERON:0000160!2.58e-12!43;UBERON:0005409!3.27e-12!59;UBERON:0000344!2.45e-11!15;UBERON:0001007!6.85e-10!128;UBERON:0001555!6.85e-10!128;UBERON:0007026!6.85e-10!128;UBERON:0001242!8.13e-10!13;UBERON:0000060!8.13e-10!13;UBERON:0001262!8.13e-10!13;UBERON:0004786!8.13e-10!13;UBERON:0004119!2.76e-09!130;UBERON:0000925!2.76e-09!130;UBERON:0006595!2.76e-09!130;UBERON:0004921!6.16e-09!126;UBERON:0004185!6.16e-09!126;UBERON:0003350!3.28e-07!9;UBERON:0004808!3.28e-07!9;UBERON:0001277!3.28e-07!9;UBERON:0005178!8.83e-07!17;UBERON:0005181!8.83e-07!17;UBERON:0002224!8.83e-07!17;UBERON:0000915!8.83e-07!17;UBERON:0008947!8.83e-07!17;UBERON:0003258!8.83e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.18e-22,31;UBERON:0005409,5.15e-20,47;UBERON:0000344,1.78e-14,15;UBERON:0001242,1.82e-12,13;UBERON:0001262,1.82e-12,13;UBERON:0004786,1.82e-12,13;UBERON:0001007,2.11e-11,116;UBERON:0001555,2.11e-11,116;UBERON:0007026,2.11e-11,116;UBERON:0004119,6.81e-11,118;UBERON:0000925,6.81e-11,118;UBERON:0006595,6.81e-11,118;UBERON:0004921,3.43e-10,114;UBERON:0003350,4.96e-09,9;UBERON:0004808,4.96e-09,9;UBERON:0001277,4.96e-09,9;UBERON:0004923,6.41e-08,24;UBERON:0005178,2.29e-07,17;UBERON:0005181,2.29e-07,17;UBERON:0002224,2.29e-07,17;UBERON:0000915,2.29e-07,17;UBERON:0008947,2.29e-07,17;UBERON:0003258,2.29e-07,17;UBERON:0000485,7.94e-07,11 | |||
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| ||
|short_description=p6@Lmo7 | |short_description=p6@Lmo7 | ||
}} | }} |
Latest revision as of 14:56, 25 September 2015
Short description: | p6@Lmo7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Lmo7_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -9bp_to_ENSMUST00000159948_5end |
EntrezGene: | Lmo7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.96e-09 | 9 |
epithelial cell of alimentary canal | 4.96e-09 | 9 |
endo-epithelial cell | 2.23e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.18e-22 | 31 |
gastrointestinal system | 5.15e-20 | 47 |
mucosa | 1.78e-14 | 15 |
intestinal mucosa | 1.82e-12 | 13 |
wall of intestine | 1.82e-12 | 13 |
gastrointestinal system mucosa | 1.82e-12 | 13 |
digestive system | 2.11e-11 | 116 |
digestive tract | 2.11e-11 | 116 |
primitive gut | 2.11e-11 | 116 |
endoderm-derived structure | 6.81e-11 | 118 |
endoderm | 6.81e-11 | 118 |
presumptive endoderm | 6.81e-11 | 118 |
subdivision of digestive tract | 3.43e-10 | 114 |
epithelium of mucosa | 4.96e-09 | 9 |
gastrointestinal system epithelium | 4.96e-09 | 9 |
intestinal epithelium | 4.96e-09 | 9 |
organ component layer | 6.41e-08 | 24 |
thoracic cavity element | 2.29e-07 | 17 |
thoracic segment organ | 2.29e-07 | 17 |
thoracic cavity | 2.29e-07 | 17 |
thoracic segment of trunk | 2.29e-07 | 17 |
respiratory primordium | 2.29e-07 | 17 |
endoderm of foregut | 2.29e-07 | 17 |
simple columnar epithelium | 7.94e-07 | 11 |