FFCP PHASE1:Mm9::chr5:138612476..138612502,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr5:138612476..138612502,- to FFCP PHASE1:Mm9::chr5:138612476..138612502,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=17220 | |EntrezGene=17220 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=D3Z2K9 | |UniProt=D3Z2K9 | ||
|association_with_transcript=0bp_to_ENSMUST00000153867_5end | |||
|cluster_id=chr5:138612476..138612502,- | |||
|description=CAGE_peak_4_at_Mcm7_5end | |||
|id=chr5:138612476..138612502,- | |||
|ontology_enrichment_celltype=CL:0000791!8.04e-07!9;CL:0000789!8.04e-07!9;CL:0002420!8.04e-07!9;CL:0002419!8.04e-07!9;CL:0000790!8.04e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.19e-07,9;CL:0000789,2.19e-07,9;CL:0002420,2.19e-07,9;CL:0002419,2.19e-07,9;CL:0000790,2.19e-07,9;CL:0000624,9.13e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!2.14e-13!94;UBERON:0007811!9.51e-13!86;UBERON:0006562!5.84e-08!24;UBERON:0001557!5.84e-08!24;UBERON:0001042!5.84e-08!24;UBERON:0008814!5.84e-08!24;UBERON:0009145!5.84e-08!24;UBERON:0002370!1.44e-07!23;UBERON:0000974!1.44e-07!23;UBERON:0004807!1.44e-07!23;UBERON:0005058!1.44e-07!23;UBERON:0003351!1.44e-07!23;UBERON:0009113!1.44e-07!23;UBERON:0003295!1.44e-07!23;UBERON:0009722!1.44e-07!23;UBERON:0005562!1.44e-07!23;UBERON:0007690!1.44e-07!23;UBERON:0003408!1.84e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007811,3.50e-09,36;UBERON:0006562,4.57e-09,24;UBERON:0001557,4.57e-09,24;UBERON:0001042,4.57e-09,24;UBERON:0008814,4.57e-09,24;UBERON:0009145,4.57e-09,24;UBERON:0000153,1.00e-08,43;UBERON:0002370,1.25e-08,23;UBERON:0000974,1.25e-08,23;UBERON:0004807,1.25e-08,23;UBERON:0005058,1.25e-08,23;UBERON:0003351,1.25e-08,23;UBERON:0009113,1.25e-08,23;UBERON:0003295,1.25e-08,23;UBERON:0009722,1.25e-08,23;UBERON:0005562,1.25e-08,23;UBERON:0007690,1.25e-08,23;UBERON:0003408,1.69e-08,24;UBERON:0000065,1.53e-07,41;UBERON:0001004,1.61e-07,42;UBERON:0000077,4.47e-07,35;UBERON:0000072,6.06e-07,27 | |||
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|phase1_expression=3.04282809499109,0.697950815278722,0.454999239389536,0,0.500895729946347,0.33575854382378,0.700837921786577,5.93967287831251,3.37892933164,2.57470978954193,4.96532107853964,2.39316476986009,5.64962408772979,5.76974655965383,1.66554880907831,0.809901069559304,0,3.78554598429885,3.97631857456642,2.97072756258621,1.36069264241712,0.595745707205312,1.04479915655574,0.319984845586813,0,0,0,1.29282739611533,0.570070258369122,0,0,0,0,0,2.3108129580102,0.166234645358492,1.02084678131185,2.09265815368454,0.7813353445238,1.0470474879476,0,0,1.45653105909346,1.88845226963366,1.52065396829272,1.28482726513177,0,0.65407546914134,0.219686182734472,0.58328969722285,0.139986421625363,0,3.6912173332702,5.07753499407941,3.36093799142464,0.514518872071894,1.14613375975503,1.54701627683233,1.82084814773638,0.528990979272033,0.633831403506179,0,0,0,0,0.7104801149461,0.299600110518405,0,1.97010263386108,3.37514845829227,3.15487442027073,0.856952953211411,0.441737081903227,3.06226998037385,3.25874601462004,0.919218786610021,0,1.53224805702225,1.22885226604995,0.923204014111357,1.64677758484337,1.56274011167028,1.3959149950069,1.68828783009504,1.06958773443767,0.589257170947335,0.711858403995515,1.67759501242771,0.757261933331841,0.377857800533928,2.31891590961342,0.860423876981386,0.679971333707751,0,0,0,0.561777680527007,0.681721290312231,0.259786004602869,0.35333957451034,1.54927761754349,1.28326477414318,0,0,0.216491041011214,0,0,0.68510327831436,3.6251303710604,1.92974780784272,0.173485326766136,1.21786191324856,1.15307748628029,0.904335843315735,1.41106448562846,0.879666139307728,1.48316980640624,2.02439099687876,1.76922110389975,0.647067399789637,1.10420759230197,1.45462575940567,1.86391761218122,2.63502717310392,1.46612694769419,0.255457055208591,1.1981512450592,0,1.39777249780371,1.19832511523858,1.83000241127451,2.89005009859588,2.43354048269187,1.02286182932132,1.87009240103604,1.46017136760982,2.13862664085664,0.995255764880744,0.758168275301024,2.31486041475121,1.17108398666433,0.689706313300419,0.720248519221397,0.753524089178575,2.4493139694478,1.40925092313335,2.06143794031403,2.84573707812917,0.862271971731369,2.08016688184601,1.58356011747554,0.43839146485515,1.66828349535359,1.0447564995665,1.64625709126355,1.39323986772945,0,1.02939162845886,0.852490498186778,0.828503090142008,0.703578179943289,1.08037236876609,0.710234206755631,0.983821158737019,1.3884040159864,0.930135779001631,0.536546802799238,1.16765342367169,0.658239399653922,1.14917224855367,1.86458261955468,1.60819986167866,2.19550115291051,2.01309628140558,1.89260953707715,2.57261530948211,0.330418782983798,0,0.639864751605702,1.85789337488351,0.515469845288373,1.21010114774006,0.444756087689741,0.380451252225118,1.89811624617805,0.494096864172033,2.26201687920243,1.1937388322469,1.55971269695296,0,1.51296634912286,1.39398891278057,0.758671603812327,0.685491075658373,1.1270773567308,0.814605311381257,0.581857461502877,0.771494018793504,1.3279672796094,1.47610147979602,0.627994911365499,1.72756029490521,0,0.333690211432188,0,0.449724224769707,0,0.241177159752417,0.50925170356284,0.575392274901621,0.486405680325106,0.274561413188081,1.43768206527355,0.744281895337007,0.312037673114561,0.505157755894224,0.358794827043824,1.92977408545347,2.21703828199926,0.37898282354097,1.14075483509418,0.339490171550376,0.704070744865506,1.34005005953453,1.6663054862021,1.95133647857799,1.41871629695572,1.7717175171902,2.07291199254733,1.96635977658886,1.55416483679306,2.16973587872267,0,0.54390568381871,0.491764273019036,1.10374698521893,2.0871576698413,1.64096361229084,0,2.52470927204373,0.94652465824877,1.17131623288992,0,0.955875191810208,0.668396022247182,1.13230612315533,0.809621403349789,0.876767573733936,1.18586333383957,4.17717711348349,2.6968616189571,1.6025904330053,1.79175655288934,2.47455184458803,1.32745138339963,0.485561272309963,0,0.565815239267694,0.295301892880773,0.307435147943927,0.258428293168221,0,0.712994756769443,0.632073515871632,2.10837217149998,1.03135543248187,2.04263763452273,1.08036656418786,1.03486947026204,1.28602221018955,1.06404140185364,1.60531935841864,1.48094118541909,2.43571959291679,0.938686832254841,2.1183207086382,1.54369878638473,2.63818004706368,3.06782410722221,2.29189114726992,1.19372344003136,1.64140899745061,0.874442509889552,1.48340241608408,0.854354403989263,0.412773735926445,0.740778109478847,0.941842285023455,1.36694227721025,2.28778173206523,1.69978429993855,2.37917468950219,1.65839968565309,0,1.58167996790568,0.813277868507395,0.432021363287205,1.25452977608681,0.87345025498471,1.07891477107857,1.23980183588004,0.523511883968059,0.777689839750757,1.24267862617385,0.56369293868419,1.34564891439581,1.15820943319968,0.777804753376191,0.774958940866387,1.520605129417,1.29092962510329,1.0416350787516,2.09718688851422,1.69108884578204,1.72818003754719,6.32022241256356,0.810900861160657,1.1298205288131,1.68897069871134,1.43221356533985,3.3775830312815,4.80781798079875,2.95379054349154,5.55315474714812,5.25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| ||
|short_description=p4@Mcm7 | |||
}} | }} |
Latest revision as of 15:16, 25 September 2015
Short description: | p4@Mcm7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Mcm7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000153867_5end |
EntrezGene: | Mcm7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.19e-07 | 9 |
alpha-beta T cell | 2.19e-07 | 9 |
immature T cell | 2.19e-07 | 9 |
mature T cell | 2.19e-07 | 9 |
immature alpha-beta T cell | 2.19e-07 | 9 |
CD4-positive, alpha-beta T cell | 9.13e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
craniocervical region | 3.50e-09 | 36 |
pharynx | 4.57e-09 | 24 |
upper respiratory tract | 4.57e-09 | 24 |
chordate pharynx | 4.57e-09 | 24 |
pharyngeal arch system | 4.57e-09 | 24 |
pharyngeal region of foregut | 4.57e-09 | 24 |
anterior region of body | 1.00e-08 | 43 |
thymus | 1.25e-08 | 23 |
neck | 1.25e-08 | 23 |
respiratory system epithelium | 1.25e-08 | 23 |
hemolymphoid system gland | 1.25e-08 | 23 |
pharyngeal epithelium | 1.25e-08 | 23 |
thymic region | 1.25e-08 | 23 |
pharyngeal gland | 1.25e-08 | 23 |
entire pharyngeal arch endoderm | 1.25e-08 | 23 |
thymus primordium | 1.25e-08 | 23 |
early pharyngeal endoderm | 1.25e-08 | 23 |
gland of gut | 1.69e-08 | 24 |
respiratory tract | 1.53e-07 | 41 |
respiratory system | 1.61e-07 | 42 |
mixed endoderm/mesoderm-derived structure | 4.47e-07 | 35 |
segment of respiratory tract | 6.06e-07 | 27 |