FFCP PHASE1:Mm9::chr2:126317269..126317294,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:126317269..126317294,-
|short_description=p2@Atp8b4
|description=CAGE_peak_2_at_Atp8b4_5end
|association_with_transcript=0bp_to_ENSMUST00000134977,NM_00108...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=241633 | |EntrezGene=241633 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3308 | |||
|TSSclassifier=NA | |||
|UniProt=A1L3S5,A2ANX3,Q69Z59 | |UniProt=A1L3S5,A2ANX3,Q69Z59 | ||
|association_with_transcript=0bp_to_ENSMUST00000134977,NM_001080944,uc008mdn.2,uc008mdo.2_5end | |||
|cluster_id=chr2:126317269..126317294,- | |||
|description=CAGE_peak_2_at_Atp8b4_5end | |||
|id=chr2:126317269..126317294,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.01e-11,32;CL:0002032,3.01e-11,32;CL:0000037,3.01e-11,32;CL:0000837,3.01e-11,32;CL:0002320,1.38e-08,46;CL:0000134,1.38e-08,46;CL:0000557,2.66e-07,7;CL:0000738,4.90e-07,17;CL:0002087,4.90e-07,17;CL:0000084,6.41e-07,11;CL:0000827,6.41e-07,11;CL:0000049,7.88e-07,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,5.08e-07,3;DOID:4045,5.08e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.37e-11!45;UBERON:0003061!1.37e-11!45;UBERON:0000926!3.63e-11!193;UBERON:0004120!3.63e-11!193;UBERON:0006603!3.63e-11!193;UBERON:0002193!4.87e-11!48;UBERON:0002405!2.25e-10!70;UBERON:0003104!2.87e-09!131;UBERON:0009142!2.87e-09!131;UBERON:0003081!4.14e-09!88;UBERON:0000077!2.90e-08!97;UBERON:0004177!4.24e-08!29;UBERON:0005057!3.52e-07!51;UBERON:0001041!3.61e-07!92;UBERON:0002204!4.67e-07!32;UBERON:0000065!5.44e-07!41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.31e-09,48;UBERON:0002405,1.31e-09,48;UBERON:0002390,2.82e-09,45;UBERON:0003061,2.82e-09,45;UBERON:0002384,1.38e-08,46;UBERON:0002204,2.71e-08,32;UBERON:0001474,8.87e-08,22;UBERON:0004765,8.87e-08,22;UBERON:0001434,8.87e-08,22 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,2.25261955442667,3.27690336850791,1.02730780935303,1.51567102091139,0,0.0874204024189974,0,0.404950534779652,0,0.788655413395594,1.23402990245165,0,0.255129870453209,7.54611229126728,12.27639008953,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,24.2748345827406,14.0640362014284,26.6997109426637,32.9409633297368,24.589637458504,16.9928623560904,0,0,0,0,0,0,0,0,0,0,0,2.68875039313971,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0,0,0,1.7997994345628,0.988866362566974,1.4209602298922,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0.075726193333184,0,0,0,0,0,0,0,0.702222100658759,0,0.259786004602869,0,0,0,0,0,0,0,0,0.22836775943812,7.50919862576798,0.742210695324124,0,0,0.230615497256059,0.301445281105245,0.23517741427141,0.251333182659351,0,0.433798070759735,3.5384422077995,0.808834249737046,1.10420759230197,2.90925151881133,0,0,0,1.02182822083437,16.0552266837933,11.3981518888747,18.1710424714483,0,0,0,0,0,0,0,0.101839363850316,2.48813941220186,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0.205782136407943,0,26.6841011179029,23.4186595474391,17.3339734631312,0.207125772535502,0,0.180062061461015,0.23674473558521,0,0,0,0,0.116765342367169,0.329119699826961,0.164167464079095,0.162137619091711,0.438599962275997,1.09775057645525,0,0,0,0,0,0,0,0.257734922644187,0,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0.166845105716094,0.982794975566015,1.34917267430912,1.62288097110802,2.65294875727659,0.50925170356284,0.863088412352432,1.94562272130042,0.549122826376163,0,1.86070473834252,0.312037673114561,0,0.179397413521912,0,2.58654466233247,0,0,0.169745085775188,0.234690248288502,0.502518772325447,0.952174563544055,0.780534591431195,0.788175720530955,0.8858587585951,1.11618338060241,1.3109065177259,1.72684981865896,1.88043776155965,19.6028669121054,9.24639662491806,0,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.325773918707152,0.329940245945071,1.32745138339963,0,0.302323556964751,0.188605079755898,0,0.307435147943927,0.258428293168221,0,0.712994756769443,0,0,0,0,0,0,0,0,0,0,0,3.75474732901937,0.21183207086382,0.220528398054962,0.65954501176592,0.484393280087717,0.482503399425247,0.119372344003136,0.164140899745061,0,0,2.56306321196779,3.09580301944834,2.77791791054568,1.50694765603753,0.820165366326151,0.915112692826091,0.509935289981566,1.6794174278839,2.07299960706636,0,0,0.203319467126849,0.108005340821801,0,0.436725127492355,0,0.0826534557253359,0.523511883968059,0,0,0,0,0.165458490457098,0,0.129159823477731,0,0.234714477291508,0,0,0,0,1.26404448251271,1.41907650703115,1.64337531463724,0.649604114888975,0.716106782669926,0.993406773906324,0.841368146639782,0.738447635872886,0.605798699688886,0.304827226619999,0.201652370273681,0.292373642219257,0.481059208201647,0.701261413089414,0.226730383615211,0,0.0897138566094757,0,0.386379188064381,5.2551093126331,0,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0,0,0.320919209591815,0.252697211763798,0.25347929989024,0.377252682772152,0.0936415074698824,0.0640251524048693,0.516919220600519,0,0.579421629724277,0.38581844092741,0,0.441596760403192,0.342869252385415,0.177475806159338,0.238436189947321,0.290692833264657,0,0.169229215783353,0,0,0.271608227691724,0,0.237270036248348,0.394017929502254,0.409231043169689,0.464810523557898,0.385813221962283,0,0.233931608445408,0.214871054048298,0.57386499620653,0.661774257358546,0.927471342481686 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,2.25261955442667,3.27690336850791,1.02730780935303,1.51567102091139,0,0.0874204024189974,0,0.404950534779652,0,0.788655413395594,1.23402990245165,0,0.255129870453209,7.54611229126728,12.27639008953,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,24.2748345827406,14.0640362014284,26.6997109426637,32.9409633297368,24.589637458504,16.9928623560904,0,0,0,0,0,0,0,0,0,0,0,2.68875039313971,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0,0,0,1.7997994345628,0.988866362566974,1.4209602298922,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0.075726193333184,0,0,0,0,0,0,0,0.702222100658759,0,0.259786004602869,0,0,0,0,0,0,0,0,0.22836775943812,7.50919862576798,0.742210695324124,0,0,0.230615497256059,0.301445281105245,0.23517741427141,0.251333182659351,0,0.433798070759735,3.5384422077995,0.808834249737046,1.10420759230197,2.90925151881133,0,0,0,1.02182822083437,16.0552266837933,11.3981518888747,18.1710424714483,0,0,0,0,0,0,0,0.101839363850316,2.48813941220186,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0.205782136407943,0,26.6841011179029,23.4186595474391,17.3339734631312,0.207125772535502,0,0.180062061461015,0.23674473558521,0,0,0,0,0.116765342367169,0.329119699826961,0.164167464079095,0.162137619091711,0.438599962275997,1.09775057645525,0,0,0,0,0,0,0,0.257734922644187,0,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0.166845105716094,0.982794975566015,1.34917267430912,1.62288097110802,2.65294875727659,0.50925170356284,0.863088412352432,1.94562272130042,0.549122826376163,0,1.86070473834252,0.312037673114561,0,0.179397413521912,0,2.58654466233247,0,0,0.169745085775188,0.234690248288502,0.502518772325447,0.952174563544055,0.780534591431195,0.788175720530955,0.8858587585951,1.11618338060241,1.3109065177259,1.72684981865896,1.88043776155965,19.6028669121054,9.24639662491806,0,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.325773918707152,0.329940245945071,1.32745138339963,0,0.302323556964751,0.188605079755898,0,0.307435147943927,0.258428293168221,0,0.712994756769443,0,0,0,0,0,0,0,0,0,0,0,3.75474732901937,0.21183207086382,0.220528398054962,0.65954501176592,0.484393280087717,0.482503399425247,0.119372344003136,0.164140899745061,0,0,2.56306321196779,3.09580301944834,2.77791791054568,1.50694765603753,0.820165366326151,0.915112692826091,0.509935289981566,1.6794174278839,2.07299960706636,0,0,0.203319467126849,0.108005340821801,0,0.436725127492355,0,0.0826534557253359,0.523511883968059,0,0,0,0,0.165458490457098,0,0.129159823477731,0,0.234714477291508,0,0,0,0,1.26404448251271,1.41907650703115,1.64337531463724,0.649604114888975,0.716106782669926,0.993406773906324,0.841368146639782,0.738447635872886,0.605798699688886,0.304827226619999,0.201652370273681,0.292373642219257,0.481059208201647,0.701261413089414,0.226730383615211,0,0.0897138566094757,0,0.386379188064381,5.2551093126331,0,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0,0,0.320919209591815,0.252697211763798,0.25347929989024,0.377252682772152,0.0936415074698824,0.0640251524048693,0.516919220600519,0,0.579421629724277,0.38581844092741,0,0.441596760403192,0.342869252385415,0.177475806159338,0.238436189947321,0.290692833264657,0,0.169229215783353,0,0,0.271608227691724,0,0.237270036248348,0.394017929502254,0.409231043169689,0.464810523557898,0.385813221962283,0,0.233931608445408,0.214871054048298,0.57386499620653,0.661774257358546,0.927471342481686 | ||
|short_description=p2@Atp8b4 | |||
}} | }} |
Latest revision as of 15:54, 25 September 2015
Short description: | p2@Atp8b4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Atp8b4_5end |
Coexpression cluster: | MCL_coexpression_mm9:3308 |
Association with transcript: | 0bp_to_ENSMUST00000134977, NM_001080944, uc008mdn.2, uc008mdo.2_5end |
EntrezGene: | Atp8b4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.01e-11 | 32 |
hematopoietic oligopotent progenitor cell | 3.01e-11 | 32 |
hematopoietic stem cell | 3.01e-11 | 32 |
hematopoietic multipotent progenitor cell | 3.01e-11 | 32 |
connective tissue cell | 1.38e-08 | 46 |
mesenchymal cell | 1.38e-08 | 46 |
granulocyte monocyte progenitor cell | 2.66e-07 | 7 |
leukocyte | 4.90e-07 | 17 |
nongranular leukocyte | 4.90e-07 | 17 |
T cell | 6.41e-07 | 11 |
pro-T cell | 6.41e-07 | 11 |
common myeloid progenitor | 7.88e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.31e-09 | 48 |
immune system | 1.31e-09 | 48 |
hematopoietic system | 2.82e-09 | 45 |
blood island | 2.82e-09 | 45 |
connective tissue | 1.38e-08 | 46 |
musculoskeletal system | 2.71e-08 | 32 |
bone element | 8.87e-08 | 22 |
skeletal element | 8.87e-08 | 22 |
skeletal system | 8.87e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 5.08e-07 | 3 |
muscle cancer | 5.08e-07 | 3 |