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FFCP PHASE1:Mm9::chr3:73512290..73512306,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=12038
|EntrezGene=12038
|HGNC=
|HGNC=
|MCL_coexpression_id=3415
|TSSclassifier=NA
|UniProt=Q03311
|UniProt=Q03311
|association_with_transcript=30bp_to_ENSMUST00000029367,NM_009738,uc008pmw.1,uc008pmx.1_5end
|association_with_transcript=30bp_to_ENSMUST00000029367,NM_009738,uc008pmw.1,uc008pmx.1_5end
|cluster_id=chr3:73512290..73512306,-
|description=CAGE_peak_3_at_Bche_5end
|description=CAGE_peak_3_at_Bche_5end
|id=chr3:73512290..73512306,-
|id=chr3:73512290..73512306,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000066,6.79e-09,25;CL:0000239,6.15e-08,6;CL:0000677,6.15e-08,6;CL:0000584,6.15e-08,6;CL:0000223,2.67e-07,20;CL:0000182,3.16e-07,5
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002107!2.14e-13!22;UBERON:0007499!2.14e-13!22;UBERON:0006925!2.14e-13!22;UBERON:0009497!2.14e-13!22;UBERON:0000015!2.14e-13!22;UBERON:0002423!2.14e-13!22;UBERON:0006235!2.14e-13!22;UBERON:0008835!2.14e-13!22;UBERON:0003894!2.14e-13!22;UBERON:0004161!2.14e-13!22;UBERON:0008836!2.14e-13!22;UBERON:0001007!9.19e-13!128;UBERON:0001555!9.19e-13!128;UBERON:0007026!9.19e-13!128;UBERON:0009854!3.12e-12!23;UBERON:0009856!3.12e-12!23;UBERON:0004119!5.38e-12!130;UBERON:0000925!5.38e-12!130;UBERON:0006595!5.38e-12!130;UBERON:0005409!1.00e-11!59;UBERON:0004921!1.12e-11!126;UBERON:0004185!1.12e-11!126;UBERON:0000160!3.31e-11!43;UBERON:0002365!4.67e-11!25;UBERON:0002330!4.67e-11!25;UBERON:0000344!1.53e-08!15;UBERON:0001242!4.11e-07!13;UBERON:0000060!4.11e-07!13;UBERON:0001262!4.11e-07!13;UBERON:0004786!4.11e-07!13
|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.69e-25,22;UBERON:0007499,7.69e-25,22;UBERON:0006925,7.69e-25,22;UBERON:0009497,7.69e-25,22;UBERON:0000015,7.69e-25,22;UBERON:0002423,7.69e-25,22;UBERON:0006235,7.69e-25,22;UBERON:0008835,7.69e-25,22;UBERON:0003894,7.69e-25,22;UBERON:0004161,7.69e-25,22;UBERON:0008836,7.69e-25,22;UBERON:0009854,1.86e-23,23;UBERON:0009856,1.86e-23,23;UBERON:0001007,1.08e-21,116;UBERON:0001555,1.08e-21,116;UBERON:0007026,1.08e-21,116;UBERON:0004119,4.56e-21,118;UBERON:0000925,4.56e-21,118;UBERON:0006595,4.56e-21,118;UBERON:0002365,5.03e-21,25;UBERON:0002330,5.03e-21,25;UBERON:0004921,1.28e-19,114;UBERON:0005409,2.84e-18,47;UBERON:0000160,3.90e-16,31;UBERON:0003929,6.34e-13,55;UBERON:0000344,1.28e-11,15;UBERON:0000490,3.63e-10,66;UBERON:0003914,7.47e-10,47;UBERON:0005256,1.15e-09,45;UBERON:0001242,4.98e-09,13;UBERON:0001262,4.98e-09,13;UBERON:0004786,4.98e-09,13;UBERON:0005911,1.15e-08,69;UBERON:0011216,8.88e-08,194;UBERON:0005172,1.29e-07,49;UBERON:0005173,1.29e-07,49;UBERON:0002417,1.29e-07,49;UBERON:0000916,1.29e-07,49;UBERON:0001041,4.79e-07,80
|phase1_expression=0.160148847104794,2.09385244583617,4.54999239389536,11.7961042409664,11.520601788766,3.18970616632591,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,22.8789164594572,19.0409703285751,2.8711598205751,7.75371593086335,5.38678081714723,8.7410772949932,7.30887376303799,0.221730510655305,0,0,0,0.577703239502549,1.32987716286794,0.612508068787107,0,0,0,0,0,0,0.251793635951155,0.304130793658544,0,0,0,0.219686182734472,1.1665793944457,0,0,0,0,0,0,0,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0.420649922702764,0,0.441737081903227,0,0,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0,0,4.63783181922684,1.72084775396277,2.719885334831,3.2382191498269,11.695975514058,10.7526452903361,3.7919993435573,0,0,0,0.14084341977668,0,0,0,0,0,0,6.39429726426736,0,0,0.867426633830679,0.608930956624282,0.461230994512117,0,0,0.251333182659351,0,1.15679485535929,0,0,0,0,0,0,0,7.66371165625774,0,0,0,0.449371918214468,0.457500602818626,0.125654352112864,0.695297280769106,0,0.41557608911912,0.648965052271031,0.203678727700633,0.373220911830279,0.505445516867349,0,0.260240885925407,0.919608417733892,0.180062129805349,0.150704817835715,0.0680364991513279,0.12811372028485,0.187403449119458,0.258703370739016,0.215567992932842,0,0.175951124163949,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0.462801338662135,0.232533944750408,0,0,0.16455984991348,0,0.0810688095458557,0,0,0,0.210289948564127,0.102904612379284,21.4772208939469,10.5780226665418,0,0,1.15980715189884,0.80673409849337,1.55664630691409,2.28270751335071,10.9141684155238,1.4822905925161,1.25667604400135,0.994782360205754,0.779856348476481,7.19055526923377,11.0230405436094,27.0832131625939,0,0.114248512609729,0,0,0.193952487167626,0.140271639780637,0,0,0,0.123397163921801,12.7474629647474,1.66845105716094,1.76903095601883,2.24862112384854,2.43432145666204,2.41177159752417,1.52775511068852,2.87696137450811,5.83686816390127,4.11842119782122,4.31304619582064,7.44281895337007,4.99260276983297,5.05157755894223,5.74071723270119,9.16642690590398,0.554259570499814,0,0,0.339490171550376,0.234690248288502,0.167506257441816,0.476087281772027,0.195133647857799,0.157635144106191,0.44292937929755,0,0,0.172684981865896,0.289298117163023,0,0,0,0.275936746304732,0.80275294993896,0.234423373184406,0,0.504941854408746,0.631016438832513,0.390438744296638,0.861693590931196,0,0.222798674082394,0.566153061577665,0,0.584511715822624,0,2.89189184779626,1.13552068166615,0.178065603667255,0.488660878060728,2.14461159864296,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0,0.516856586336442,0.727067458955011,2.13898427030833,1.26414703174326,1.05418608574999,2.06271086496374,0,0.18006109403131,0,0.857348140126369,0,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0,0.16488625294148,0.161464426695906,0.301564624640779,0.119372344003136,0.164140899745061,7.57850175237612,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0,0,1.90934123603023,0.474503990371703,1.42323626988794,3.13215488383224,3.3454127362315,4.80397640241591,4.04593039154462,4.71124697634415,3.40282724579238,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0.129159823477731,0.506868376472335,0.352071715937262,0.13020438484395,0.104859344425711,0,0.288030006257865,0.948033361884535,0.608175645870493,0.205421914329655,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0,0,0,0.0974578807397524,0,0,0.680191150845634,0,0,0,0.19318959403219,0,1.46521299413812,0.428736758158132,0,0.564751842617067,0.460325236507177,0.572895513439397,0.171853182343688,0,0,0.675022500231806,0.45032120322422,1.35942722695261,1.03552062350364,0,0.399024873401031,0.170733605754134,0.486213434136588,0,0,0.222246727801615,0,0.962757628775446,0.252697211763798,0.50695859978048,0.377252682772152,0.468207537349412,0,0.229741875822453,0.476293691283074,0.115884325944855,0.964546102318525,0.824171801606613,0.441596760403192,0.342869252385415,0.532427418478012,0.238436189947321,0.290692833264657,0.282328141245992,0.423073039458382,0.365855945745545,0,0.814824683075171,0.561142271657738,0.355905054372522,0.197008964751127,0.818462086339379,0.309873682371932,0.771626443924566,0,0,1.28922632428979,0.57386499620653,0,0.231867835620421
|phase1_expression=0.160148847104794,2.09385244583617,4.54999239389536,11.7961042409664,11.520601788766,3.18970616632591,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,22.8789164594572,19.0409703285751,2.8711598205751,7.75371593086335,5.38678081714723,8.7410772949932,7.30887376303799,0.221730510655305,0,0,0,0.577703239502549,1.32987716286794,0.612508068787107,0,0,0,0,0,0,0.251793635951155,0.304130793658544,0,0,0,0.219686182734472,1.1665793944457,0,0,0,0,0,0,0,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0.420649922702764,0,0.441737081903227,0,0,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0,0,4.63783181922684,1.72084775396277,2.719885334831,3.2382191498269,11.695975514058,10.7526452903361,3.7919993435573,0,0,0,0.14084341977668,0,0,0,0,0,0,6.39429726426736,0,0,0.867426633830679,0.608930956624282,0.461230994512117,0,0,0.251333182659351,0,1.15679485535929,0,0,0,0,0,0,0,7.66371165625774,0,0,0,0.449371918214468,0.457500602818626,0.125654352112864,0.695297280769106,0,0.41557608911912,0.648965052271031,0.203678727700633,0.373220911830279,0.505445516867349,0,0.260240885925407,0.919608417733892,0.180062129805349,0.150704817835715,0.0680364991513279,0.12811372028485,0.187403449119458,0.258703370739016,0.215567992932842,0,0.175951124163949,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0.462801338662135,0.232533944750408,0,0,0.16455984991348,0,0.0810688095458557,0,0,0,0.210289948564127,0.102904612379284,21.4772208939469,10.5780226665418,0,0,1.15980715189884,0.80673409849337,1.55664630691409,2.28270751335071,10.9141684155238,1.4822905925161,1.25667604400135,0.994782360205754,0.779856348476481,7.19055526923377,11.0230405436094,27.0832131625939,0,0.114248512609729,0,0,0.193952487167626,0.140271639780637,0,0,0,0.123397163921801,12.7474629647474,1.66845105716094,1.76903095601883,2.24862112384854,2.43432145666204,2.41177159752417,1.52775511068852,2.87696137450811,5.83686816390127,4.11842119782122,4.31304619582064,7.44281895337007,4.99260276983297,5.05157755894223,5.74071723270119,9.16642690590398,0.554259570499814,0,0,0.339490171550376,0.234690248288502,0.167506257441816,0.476087281772027,0.195133647857799,0.157635144106191,0.44292937929755,0,0,0.172684981865896,0.289298117163023,0,0,0,0.275936746304732,0.80275294993896,0.234423373184406,0,0.504941854408746,0.631016438832513,0.390438744296638,0.861693590931196,0,0.222798674082394,0.566153061577665,0,0.584511715822624,0,2.89189184779626,1.13552068166615,0.178065603667255,0.488660878060728,2.14461159864296,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0,0.516856586336442,0.727067458955011,2.13898427030833,1.26414703174326,1.05418608574999,2.06271086496374,0,0.18006109403131,0,0.857348140126369,0,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0,0.16488625294148,0.161464426695906,0.301564624640779,0.119372344003136,0.164140899745061,7.57850175237612,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0,0,1.90934123603023,0.474503990371703,1.42323626988794,3.13215488383224,3.3454127362315,4.80397640241591,4.04593039154462,4.71124697634415,3.40282724579238,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0.129159823477731,0.506868376472335,0.352071715937262,0.13020438484395,0.104859344425711,0,0.288030006257865,0.948033361884535,0.608175645870493,0.205421914329655,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0,0,0,0.0974578807397524,0,0,0.680191150845634,0,0,0,0.19318959403219,0,1.46521299413812,0.428736758158132,0,0.564751842617067,0.460325236507177,0.572895513439397,0.171853182343688,0,0,0.675022500231806,0.45032120322422,1.35942722695261,1.03552062350364,0,0.399024873401031,0.170733605754134,0.486213434136588,0,0,0.222246727801615,0,0.962757628775446,0.252697211763798,0.50695859978048,0.377252682772152,0.468207537349412,0,0.229741875822453,0.476293691283074,0.115884325944855,0.964546102318525,0.824171801606613,0.441596760403192,0.342869252385415,0.532427418478012,0.238436189947321,0.290692833264657,0.282328141245992,0.423073039458382,0.365855945745545,0,0.814824683075171,0.561142271657738,0.355905054372522,0.197008964751127,0.818462086339379,0.309873682371932,0.771626443924566,0,0,1.28922632428979,0.57386499620653,0,0.231867835620421
|short_description=p3@Bche
|short_description=p3@Bche
}}
}}

Latest revision as of 16:46, 25 September 2015

Short description:p3@Bche
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Bche_5end
Coexpression cluster:MCL_coexpression_mm9:3415
Association with transcript: 30bp_to_ENSMUST00000029367, NM_009738, uc008pmw.1, uc008pmx.1_5end
EntrezGene:Bche
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Bche

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.55
CD326+ enterocyte, pool1.CNhs13542.11848-124I311.80
CD326+ enterocyte, pool2.CNhs13197.11849-124I411.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.19
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.87
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D122.88
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D219.04
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I17.75
GP2+ M cell, pool3.CNhs13240.11847-124I25.39
Ileum epithelium, pool1.CNhs13199.10252-104B98.74
Ileum epithelium, pool2.CNhs13232.10253-104C17.31
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.64
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F411.70
Mouse hepatocyte, donor8.CNhs13091.11824-124F610.75
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.39
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H77.66
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I321.48
intestine, adult.CNhs10496.178-9A310.58
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D31.56
intestine, embryo E18.CNhs10526.1289-20F72.28
intestine, neonate N00.CNhs11126.644-26D110.91
intestine, neonate N01.CNhs11192.1322-23E91.48
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E311.02
intestine, neonate N30.CNhs11131.1384-42G127.08
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B212.75
liver, embryo E12.CNhs10601.355-15F81.67
liver, embryo E13.CNhs10524.378-3H61.77
liver, embryo E14.CNhs10594.409-16E12.25
liver, embryo E15.CNhs10520.433-16D72.43
liver, embryo E16.CNhs10523.462-17F52.41
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G42.88
liver, neonate N00.CNhs11117.641-24F45.84
liver, neonate N03.CNhs11123.1345-25G24.12
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H27.44
liver, neonate N10.CNhs11115.751-24B94.99
liver, neonate N20.CNhs11220.823-25A35.05
liver, neonate N25.CNhs11198.1368-26H15.74
liver, neonate N30.CNhs11106.1382-42D19.17
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G62.14
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I17.58
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D43.13
stomach, embryo E17.CNhs11006.1035-18D53.35
stomach, embryo E18.CNhs10999.1286-20C64.80
stomach, neonate N03.CNhs11193.1340-24B84.05
stomach, neonate N07.CNhs11210.718-18A94.71
stomach, neonate N25.CNhs11104.1355-25E43.40
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell6.79e-0925
brush border epithelial cell6.15e-086
gut absorptive cell6.15e-086
enterocyte6.15e-086
endodermal cell2.67e-0720
hepatocyte3.16e-075

Uber anatomy
Ontology termp-valuen
liver7.69e-2522
epithelial sac7.69e-2522
digestive gland7.69e-2522
epithelium of foregut-midgut junction7.69e-2522
anatomical boundary7.69e-2522
hepatobiliary system7.69e-2522
foregut-midgut junction7.69e-2522
hepatic diverticulum7.69e-2522
liver primordium7.69e-2522
septum transversum7.69e-2522
liver bud7.69e-2522
digestive tract diverticulum1.86e-2323
sac1.86e-2323
digestive system1.08e-21116
digestive tract1.08e-21116
primitive gut1.08e-21116
endoderm-derived structure4.56e-21118
endoderm4.56e-21118
presumptive endoderm4.56e-21118
exocrine gland5.03e-2125
exocrine system5.03e-2125
subdivision of digestive tract1.28e-19114
gastrointestinal system2.84e-1847
intestine3.90e-1631
gut epithelium6.34e-1355
mucosa1.28e-1115
unilaminar epithelium3.63e-1066
epithelial tube7.47e-1047
trunk mesenchyme1.15e-0945
intestinal mucosa4.98e-0913
wall of intestine4.98e-0913
gastrointestinal system mucosa4.98e-0913
endo-epithelium1.15e-0869
organ system subdivision8.88e-08194
abdomen element1.29e-0749
abdominal segment element1.29e-0749
abdominal segment of trunk1.29e-0749
abdomen1.29e-0749
foregut4.79e-0780
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