FFCP PHASE1:Mm9::chr7:120351014..120351109,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=11865 | |EntrezGene=11865 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9WTL8,E9QP96,Q3UHZ2 | |UniProt=Q9WTL8,E9QP96,Q3UHZ2 | ||
|association_with_transcript=35bp_to_ENSMUST00000047321,ENSMUST00000084703,ENSMUST00000106637,NM_001243048,NM_007489,uc009jhe.1,uc009jhf.1,uc012fsi.1_5end | |association_with_transcript=35bp_to_ENSMUST00000047321,ENSMUST00000084703,ENSMUST00000106637,NM_001243048,NM_007489,uc009jhe.1,uc009jhf.1,uc012fsi.1_5end | ||
|cluster_id=chr7:120351014..120351109,+ | |||
|description=CAGE_peak_1_at_Arntl_5end | |description=CAGE_peak_1_at_Arntl_5end | ||
|id=chr7:120351014..120351109,+ | |id=chr7:120351014..120351109,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!6.59e-12!86;UBERON:0000483!2.31e-11!181;UBERON:0000119!3.61e-11!183;UBERON:0004121!2.70e-10!102;UBERON:0000924!2.70e-10!102;UBERON:0006601!2.70e-10!102;UBERON:0002346!9.88e-10!71;UBERON:0003075!9.88e-10!71;UBERON:0007284!9.88e-10!71;UBERON:0000153!2.00e-09!94;UBERON:0002530!1.33e-08!65;UBERON:0000033!4.56e-08!63;UBERON:0000475!1.25e-07!200;UBERON:0000062!1.49e-07!269;UBERON:0002368!1.52e-07!60;UBERON:0000949!3.69e-07!72;UBERON:0003929!4.04e-07!55;UBERON:0000481!4.27e-07!230 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000483,1.33e-09,174;UBERON:0010371,1.52e-09,73;UBERON:0000119,2.03e-09,176;UBERON:0004121,1.11e-08,95;UBERON:0000924,1.11e-08,95;UBERON:0006601,1.11e-08,95;UBERON:0002530,1.30e-08,65;UBERON:0002346,3.95e-08,64;UBERON:0003075,3.95e-08,64;UBERON:0007284,3.95e-08,64;UBERON:0007811,4.09e-08,36;UBERON:0011216,7.86e-08,194;UBERON:0002368,1.48e-07,60;UBERON:0000949,3.62e-07,72;UBERON:0003929,3.94e-07,55;UBERON:0010314,7.71e-07,92 | |||
|phase1_expression=13.1322054625931,21.9854506812797,13.6499771816861,61.7026991065933,39.0698669358151,14.2697381125106,16.8201101228778,29.8274877150041,27.1722233752717,33.2371627377231,9.58820622062828,11.8062795313098,19.6880839420887,19.0576477273414,4.66353666541928,4.85940641735582,2.09868563438444,20.5050407482854,25.3661702170617,28.00971701867,12.8415368128115,0.496454756004426,0.783599367416806,6.87967418011649,4.12936705920906,17.2269589234506,19.8150518233174,15.2984575206981,8.93110071444957,7.81293402255785,5.32153225572731,0,0,0,24.2635360591071,20.613096024453,20.0085969137122,0,1.5626706890476,0.523523743973798,0.588231488031014,0.683045484958446,0.971020706062307,5.5394599909254,6.89363132292699,5.87349606917381,12.5182615095686,17.2239873540553,11.643367684927,7.19390626574849,10.7789544651529,17.2503077237966,29.8653038782771,36.9934692425786,22.1821907434026,22.8960898071993,12.8940047972441,8.76642556871652,8.29497489524351,12.1667925232568,15.2119536841483,12.5372476865579,8.00365316500025,3.1496490104849,6.92206453796882,2.8419204597844,6.5912024314049,8.06858441175265,9.12468588314603,8.6403800532282,7.57169860864975,13.9968982357864,12.589506834242,10.1667363348412,8.62609239164127,11.0306254393203,9.91042928994498,16.4716666129892,11.0596703944495,10.9465618816061,13.7231465403614,9.89735404057844,9.49222196604695,9.56696437053856,9.16789486660861,14.4368006882097,13.5253096759148,10.0655700745662,55.4315735198907,7.40601289046498,18.5513272769074,43.0211938490693,15.6393406752783,32.382191498269,19.4932925234301,4.48026887097336,8.56710962803686,10.3962496772615,8.83272415649754,8.48014978824817,18.0279577314151,21.815501160434,12.7402619853323,0,4.76280290224671,4.30711771307668,8.59391556525132,15.6431915215112,28.7421050848361,21.3756680253348,11.450031566565,29.8376168745898,25.1370892009104,28.335856423893,25.1639833270408,19.2269884734403,13.5957232253906,3.47038456607788,8.84610551949874,11.3236794963186,9.49618529379692,11.1521308221101,14.9113408974498,35.7192572354088,56.9695042532598,13.7946809812639,1.43778149407104,2.99951365496704,2.03312363316904,15.5782264981016,12.8100168789215,10.8062742817063,28.8548371519179,38.8687495142102,19.1165000994795,25.9586020908412,6.51771928642024,20.029522268225,9.09801930361229,40.404836330203,16.3951758133007,22.5304062344803,27.1893816006077,29.9902587493073,63.4100172090376,61.8789268975824,61.843138209421,43.9795730256327,4.52692785158969,3.59301552318857,4.22282697993477,2.6303487891309,3.61461423993277,8.00979983000983,16.2567887762275,2.9855140022774,0,0.257347907114715,1.42081749697796,4.97101854085205,4.69052119962192,4.50155153652537,4.49814997611899,5.3126342571799,5.55361606394562,9.76642567951713,6.17028823219124,8.75740067753771,8.06343264576054,8.86504306027114,10.2957388123237,16.9591985413385,35.5671186771502,48.3143107537338,19.767255165028,13.5834088340655,63.1099875499054,14.8092317331585,1.2797295032114,2.32236671860439,5.15469845288373,7.05892336181699,7.33847544688072,7.79925067061493,16.1339880925134,6.75265714368445,13.3207660664143,13.5290400987983,13.062593836981,22.4704852163555,34.3659499300764,52.1750135926442,4.74169752382704,6.16941968092536,3.38123207019241,5.90588850751411,6.0125271021964,13.1855341393799,13.1531997218455,4.87113488332687,23.863806631889,38.2531208157582,6.52195779591728,1.83529616287703,2.75182593158484,4.49724224769707,6.49152388443209,11.3353265083636,12.9859184408524,17.5494643844994,14.5921704097532,21.4157902286704,17.2521847832825,27.9105710751378,35.8843324081745,50.2631967114752,48.7960964779601,66.5772059481447,6.28160846566456,3.03186258832776,3.7481944581666,3.05541154395339,5.63256595892405,10.3853879613926,15.9489239393629,30.6359827136744,14.9753386900881,13.9522754478728,21.2074842314458,3.60499292374624,32.8101465545202,41.8035779300568,4.52373851817817,4.35124547054968,31.9646777462374,18.4877620024171,16.3761601787548,19.4571399743057,12.622990794004,61.8553771650714,14.5133780931478,17.9601822376454,21.3269163755471,8.84184552424442,7.79795359288379,8.20921939287614,13.7635638569464,14.3205370376543,19.3691011193797,23.4564560987919,15.4714692877013,5.52003371368491,7.00413925220377,6.26886467295635,31.8588332015911,1.21390318077491,6.04647113929502,8.11001842950362,8.85905678642318,11.6825356218692,13.1798429515793,13.8142817201452,12.4774082434652,18.3301319602773,32.6797686582496,26.8152412445286,38.8101150559318,10.0834212657534,14.746889951234,14.5749183821483,18.6207245324387,16.9450376721967,19.087686389846,24.9661258273971,6.10146440965647,20.1240467320629,20.5091410191115,16.6535115470895,20.3445177636841,15.0179183071108,15.1602876883983,17.8913580722117,25.358832786797,15.2048747648618,8.88528580148834,5.98521917093345,6.2966139305702,3.95573759709851,4.64760374251486,6.63456702298916,6.62915876976036,8.11718423477216,9.81219814011409,11.4560474161814,3.16335993581135,9.35269548783504,7.66837919834789,8.99079672862215,9.38959024108564,11.4634694427098,13.7204736504058,25.6520823144349,49.5129197974649,22.3682152711293,2.81846469342095,5.68162874967119,6.28742263736971,10.1114617938905,7.4912697617084,6.9272011451219,12.4398672964499,10.9371683268918,8.28388820963116,3.8653459332161,14.977560325409,69.5224465381992,2.8381530140623,4.72470402958205,6.62596197186755,25.4217907847824,35.9613252154089,38.58273929591,38.5469665925647,44.0213721773924,46.5623588662049,59.5882754158727,50.385724342452,60.2286128668462,79.3594165812853,10.4295976462997,6.65957860122194,4.12683740403588,10.5767308309369,16.227925898704,12.387043379778,16.4836461840539,14.5770497773765,14.0440189129902,27.1080884456192,22.0956113523445,28.6447756719698,25.6061241692095,30.8287133896789,39.2804826642644,26.3258775090404,31.9728054289197,31.7199686288943,36.2432218226274,3.1136204275253,3.59122386060928,3.41467211508268,8.0225216632537,6.70762120409543,7.35374033800057,12.2235700290888,7.62329711783909,11.8740107548972,10.3605856823157,7.09742039692671,8.48818536237343,11.2369808963859,11.6525777376862,11.3147873842558,10.4784612082276,12.051969898265,11.1887347868949,9.89006161927936,9.71512872887022,8.9146005620208,7.63145966485151,8.82213902805088,9.01147783120437,12.798875736485,9.89990912332615,9.87811053512972,9.47050961176234,12.6297825876651,9.53941861818155,9.96534152243063,9.94895271993191,9.00308294973317,11.9301367713194,11.9602098808308,9.99242311751784,12.8662384644975,15.4707158914775,13.7727599089567,9.70602244125868,13.216466630364 | |phase1_expression=13.1322054625931,21.9854506812797,13.6499771816861,61.7026991065933,39.0698669358151,14.2697381125106,16.8201101228778,29.8274877150041,27.1722233752717,33.2371627377231,9.58820622062828,11.8062795313098,19.6880839420887,19.0576477273414,4.66353666541928,4.85940641735582,2.09868563438444,20.5050407482854,25.3661702170617,28.00971701867,12.8415368128115,0.496454756004426,0.783599367416806,6.87967418011649,4.12936705920906,17.2269589234506,19.8150518233174,15.2984575206981,8.93110071444957,7.81293402255785,5.32153225572731,0,0,0,24.2635360591071,20.613096024453,20.0085969137122,0,1.5626706890476,0.523523743973798,0.588231488031014,0.683045484958446,0.971020706062307,5.5394599909254,6.89363132292699,5.87349606917381,12.5182615095686,17.2239873540553,11.643367684927,7.19390626574849,10.7789544651529,17.2503077237966,29.8653038782771,36.9934692425786,22.1821907434026,22.8960898071993,12.8940047972441,8.76642556871652,8.29497489524351,12.1667925232568,15.2119536841483,12.5372476865579,8.00365316500025,3.1496490104849,6.92206453796882,2.8419204597844,6.5912024314049,8.06858441175265,9.12468588314603,8.6403800532282,7.57169860864975,13.9968982357864,12.589506834242,10.1667363348412,8.62609239164127,11.0306254393203,9.91042928994498,16.4716666129892,11.0596703944495,10.9465618816061,13.7231465403614,9.89735404057844,9.49222196604695,9.56696437053856,9.16789486660861,14.4368006882097,13.5253096759148,10.0655700745662,55.4315735198907,7.40601289046498,18.5513272769074,43.0211938490693,15.6393406752783,32.382191498269,19.4932925234301,4.48026887097336,8.56710962803686,10.3962496772615,8.83272415649754,8.48014978824817,18.0279577314151,21.815501160434,12.7402619853323,0,4.76280290224671,4.30711771307668,8.59391556525132,15.6431915215112,28.7421050848361,21.3756680253348,11.450031566565,29.8376168745898,25.1370892009104,28.335856423893,25.1639833270408,19.2269884734403,13.5957232253906,3.47038456607788,8.84610551949874,11.3236794963186,9.49618529379692,11.1521308221101,14.9113408974498,35.7192572354088,56.9695042532598,13.7946809812639,1.43778149407104,2.99951365496704,2.03312363316904,15.5782264981016,12.8100168789215,10.8062742817063,28.8548371519179,38.8687495142102,19.1165000994795,25.9586020908412,6.51771928642024,20.029522268225,9.09801930361229,40.404836330203,16.3951758133007,22.5304062344803,27.1893816006077,29.9902587493073,63.4100172090376,61.8789268975824,61.843138209421,43.9795730256327,4.52692785158969,3.59301552318857,4.22282697993477,2.6303487891309,3.61461423993277,8.00979983000983,16.2567887762275,2.9855140022774,0,0.257347907114715,1.42081749697796,4.97101854085205,4.69052119962192,4.50155153652537,4.49814997611899,5.3126342571799,5.55361606394562,9.76642567951713,6.17028823219124,8.75740067753771,8.06343264576054,8.86504306027114,10.2957388123237,16.9591985413385,35.5671186771502,48.3143107537338,19.767255165028,13.5834088340655,63.1099875499054,14.8092317331585,1.2797295032114,2.32236671860439,5.15469845288373,7.05892336181699,7.33847544688072,7.79925067061493,16.1339880925134,6.75265714368445,13.3207660664143,13.5290400987983,13.062593836981,22.4704852163555,34.3659499300764,52.1750135926442,4.74169752382704,6.16941968092536,3.38123207019241,5.90588850751411,6.0125271021964,13.1855341393799,13.1531997218455,4.87113488332687,23.863806631889,38.2531208157582,6.52195779591728,1.83529616287703,2.75182593158484,4.49724224769707,6.49152388443209,11.3353265083636,12.9859184408524,17.5494643844994,14.5921704097532,21.4157902286704,17.2521847832825,27.9105710751378,35.8843324081745,50.2631967114752,48.7960964779601,66.5772059481447,6.28160846566456,3.03186258832776,3.7481944581666,3.05541154395339,5.63256595892405,10.3853879613926,15.9489239393629,30.6359827136744,14.9753386900881,13.9522754478728,21.2074842314458,3.60499292374624,32.8101465545202,41.8035779300568,4.52373851817817,4.35124547054968,31.9646777462374,18.4877620024171,16.3761601787548,19.4571399743057,12.622990794004,61.8553771650714,14.5133780931478,17.9601822376454,21.3269163755471,8.84184552424442,7.79795359288379,8.20921939287614,13.7635638569464,14.3205370376543,19.3691011193797,23.4564560987919,15.4714692877013,5.52003371368491,7.00413925220377,6.26886467295635,31.8588332015911,1.21390318077491,6.04647113929502,8.11001842950362,8.85905678642318,11.6825356218692,13.1798429515793,13.8142817201452,12.4774082434652,18.3301319602773,32.6797686582496,26.8152412445286,38.8101150559318,10.0834212657534,14.746889951234,14.5749183821483,18.6207245324387,16.9450376721967,19.087686389846,24.9661258273971,6.10146440965647,20.1240467320629,20.5091410191115,16.6535115470895,20.3445177636841,15.0179183071108,15.1602876883983,17.8913580722117,25.358832786797,15.2048747648618,8.88528580148834,5.98521917093345,6.2966139305702,3.95573759709851,4.64760374251486,6.63456702298916,6.62915876976036,8.11718423477216,9.81219814011409,11.4560474161814,3.16335993581135,9.35269548783504,7.66837919834789,8.99079672862215,9.38959024108564,11.4634694427098,13.7204736504058,25.6520823144349,49.5129197974649,22.3682152711293,2.81846469342095,5.68162874967119,6.28742263736971,10.1114617938905,7.4912697617084,6.9272011451219,12.4398672964499,10.9371683268918,8.28388820963116,3.8653459332161,14.977560325409,69.5224465381992,2.8381530140623,4.72470402958205,6.62596197186755,25.4217907847824,35.9613252154089,38.58273929591,38.5469665925647,44.0213721773924,46.5623588662049,59.5882754158727,50.385724342452,60.2286128668462,79.3594165812853,10.4295976462997,6.65957860122194,4.12683740403588,10.5767308309369,16.227925898704,12.387043379778,16.4836461840539,14.5770497773765,14.0440189129902,27.1080884456192,22.0956113523445,28.6447756719698,25.6061241692095,30.8287133896789,39.2804826642644,26.3258775090404,31.9728054289197,31.7199686288943,36.2432218226274,3.1136204275253,3.59122386060928,3.41467211508268,8.0225216632537,6.70762120409543,7.35374033800057,12.2235700290888,7.62329711783909,11.8740107548972,10.3605856823157,7.09742039692671,8.48818536237343,11.2369808963859,11.6525777376862,11.3147873842558,10.4784612082276,12.051969898265,11.1887347868949,9.89006161927936,9.71512872887022,8.9146005620208,7.63145966485151,8.82213902805088,9.01147783120437,12.798875736485,9.89990912332615,9.87811053512972,9.47050961176234,12.6297825876651,9.53941861818155,9.96534152243063,9.94895271993191,9.00308294973317,11.9301367713194,11.9602098808308,9.99242311751784,12.8662384644975,15.4707158914775,13.7727599089567,9.70602244125868,13.216466630364 | ||
|short_description=p1@Arntl | |short_description=p1@Arntl | ||
}} | }} |
Latest revision as of 18:12, 25 September 2015
Short description: | p1@Arntl |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Arntl_5end |
Coexpression cluster: | NA |
Association with transcript: | 35bp_to_ENSMUST00000047321, ENSMUST00000084703, ENSMUST00000106637, NM_001243048, NM_007489, uc009jhe.1, uc009jhf.1, uc012fsi.1_5end |
EntrezGene: | Arntl |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelium | 1.33e-09 | 174 |
ecto-epithelium | 1.52e-09 | 73 |
cell layer | 2.03e-09 | 176 |
ectoderm-derived structure | 1.11e-08 | 95 |
ectoderm | 1.11e-08 | 95 |
presumptive ectoderm | 1.11e-08 | 95 |
gland | 1.30e-08 | 65 |
neurectoderm | 3.95e-08 | 64 |
neural plate | 3.95e-08 | 64 |
presumptive neural plate | 3.95e-08 | 64 |
craniocervical region | 4.09e-08 | 36 |
organ system subdivision | 7.86e-08 | 194 |
endocrine gland | 1.48e-07 | 60 |
endocrine system | 3.62e-07 | 72 |
gut epithelium | 3.94e-07 | 55 |
structure with developmental contribution from neural crest | 7.71e-07 | 92 |