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FFCP PHASE1:Mm9::chr7:120351014..120351109,+: Difference between revisions

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{{FFCP|EntrezGene=11865|HGNC=|UniProt=Q9WTL8,E9QP96,Q3UHZ2|association_with_transcript=35bp_to_ENSMUST00000047321,ENSMUST00000084703,ENSMUST00000106637,NM_001243048,NM_007489,uc009jhe.1,uc009jhf.1,uc012fsi.1_5end|description=CAGE_peak_1_at_Arntl_5end|id=chr7:120351014..120351109,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007811!6.59e-12!86;UBERON:0000483!2.31e-11!181;UBERON:0000119!3.61e-11!183;UBERON:0004121!2.70e-10!102;UBERON:0000924!2.70e-10!102;UBERON:0006601!2.70e-10!102;UBERON:0002346!9.88e-10!71;UBERON:0003075!9.88e-10!71;UBERON:0007284!9.88e-10!71;UBERON:0000153!2.00e-09!94;UBERON:0002530!1.33e-08!65;UBERON:0000033!4.56e-08!63;UBERON:0000475!1.25e-07!200;UBERON:0000062!1.49e-07!269;UBERON:0002368!1.52e-07!60;UBERON:0000949!3.69e-07!72;UBERON:0003929!4.04e-07!55;UBERON:0000481!4.27e-07!230|ontology_enrichment_uberon_v019_2=UBERON:0000483,1.33e-09,174;UBERON:0010371,1.52e-09,73;UBERON:0000119,2.03e-09,176;UBERON:0004121,1.11e-08,95;UBERON:0000924,1.11e-08,95;UBERON:0006601,1.11e-08,95;UBERON:0002530,1.30e-08,65;UBERON:0002346,3.95e-08,64;UBERON:0003075,3.95e-08,64;UBERON:0007284,3.95e-08,64;UBERON:0007811,4.09e-08,36;UBERON:0011216,7.86e-08,194;UBERON:0002368,1.48e-07,60;UBERON:0000949,3.62e-07,72;UBERON:0003929,3.94e-07,55;UBERON:0010314,7.71e-07,92|phase1_expression=13.1322054625931,21.9854506812797,13.6499771816861,61.7026991065933,39.0698669358151,14.2697381125106,16.8201101228778,29.8274877150041,27.1722233752717,33.2371627377231,9.58820622062828,11.8062795313098,19.6880839420887,19.0576477273414,4.66353666541928,4.85940641735582,2.09868563438444,20.5050407482854,25.3661702170617,28.00971701867,12.8415368128115,0.496454756004426,0.783599367416806,6.87967418011649,4.12936705920906,17.2269589234506,19.8150518233174,15.2984575206981,8.93110071444957,7.81293402255785,5.32153225572731,0,0,0,24.2635360591071,20.613096024453,20.0085969137122,0,1.5626706890476,0.523523743973798,0.588231488031014,0.683045484958446,0.971020706062307,5.5394599909254,6.89363132292699,5.87349606917381,12.5182615095686,17.2239873540553,11.643367684927,7.19390626574849,10.7789544651529,17.2503077237966,29.8653038782771,36.9934692425786,22.1821907434026,22.8960898071993,12.8940047972441,8.76642556871652,8.29497489524351,12.1667925232568,15.2119536841483,12.5372476865579,8.00365316500025,3.1496490104849,6.92206453796882,2.8419204597844,6.5912024314049,8.06858441175265,9.12468588314603,8.6403800532282,7.57169860864975,13.9968982357864,12.589506834242,10.1667363348412,8.62609239164127,11.0306254393203,9.91042928994498,16.4716666129892,11.0596703944495,10.9465618816061,13.7231465403614,9.89735404057844,9.49222196604695,9.56696437053856,9.16789486660861,14.4368006882097,13.5253096759148,10.0655700745662,55.4315735198907,7.40601289046498,18.5513272769074,43.0211938490693,15.6393406752783,32.382191498269,19.4932925234301,4.48026887097336,8.56710962803686,10.3962496772615,8.83272415649754,8.48014978824817,18.0279577314151,21.815501160434,12.7402619853323,0,4.76280290224671,4.30711771307668,8.59391556525132,15.6431915215112,28.7421050848361,21.3756680253348,11.450031566565,29.8376168745898,25.1370892009104,28.335856423893,25.1639833270408,19.2269884734403,13.5957232253906,3.47038456607788,8.84610551949874,11.3236794963186,9.49618529379692,11.1521308221101,14.9113408974498,35.7192572354088,56.9695042532598,13.7946809812639,1.43778149407104,2.99951365496704,2.03312363316904,15.5782264981016,12.8100168789215,10.8062742817063,28.8548371519179,38.8687495142102,19.1165000994795,25.9586020908412,6.51771928642024,20.029522268225,9.09801930361229,40.404836330203,16.3951758133007,22.5304062344803,27.1893816006077,29.9902587493073,63.4100172090376,61.8789268975824,61.843138209421,43.9795730256327,4.52692785158969,3.59301552318857,4.22282697993477,2.6303487891309,3.61461423993277,8.00979983000983,16.2567887762275,2.9855140022774,0,0.257347907114715,1.42081749697796,4.97101854085205,4.69052119962192,4.50155153652537,4.49814997611899,5.3126342571799,5.55361606394562,9.76642567951713,6.17028823219124,8.75740067753771,8.06343264576054,8.86504306027114,10.2957388123237,16.9591985413385,35.5671186771502,48.3143107537338,19.767255165028,13.5834088340655,63.1099875499054,14.8092317331585,1.2797295032114,2.32236671860439,5.15469845288373,7.05892336181699,7.33847544688072,7.79925067061493,16.1339880925134,6.75265714368445,13.3207660664143,13.5290400987983,13.062593836981,22.4704852163555,34.3659499300764,52.1750135926442,4.74169752382704,6.16941968092536,3.38123207019241,5.90588850751411,6.0125271021964,13.1855341393799,13.1531997218455,4.87113488332687,23.863806631889,38.2531208157582,6.52195779591728,1.83529616287703,2.75182593158484,4.49724224769707,6.49152388443209,11.3353265083636,12.9859184408524,17.5494643844994,14.5921704097532,21.4157902286704,17.2521847832825,27.9105710751378,35.8843324081745,50.2631967114752,48.796096477960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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=11865
|HGNC=
|TSSclassifier=NA
|UniProt=Q9WTL8,E9QP96,Q3UHZ2
|association_with_transcript=35bp_to_ENSMUST00000047321,ENSMUST00000084703,ENSMUST00000106637,NM_001243048,NM_007489,uc009jhe.1,uc009jhf.1,uc012fsi.1_5end
|cluster_id=chr7:120351014..120351109,+
|description=CAGE_peak_1_at_Arntl_5end
|id=chr7:120351014..120351109,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0000483,1.33e-09,174;UBERON:0010371,1.52e-09,73;UBERON:0000119,2.03e-09,176;UBERON:0004121,1.11e-08,95;UBERON:0000924,1.11e-08,95;UBERON:0006601,1.11e-08,95;UBERON:0002530,1.30e-08,65;UBERON:0002346,3.95e-08,64;UBERON:0003075,3.95e-08,64;UBERON:0007284,3.95e-08,64;UBERON:0007811,4.09e-08,36;UBERON:0011216,7.86e-08,194;UBERON:0002368,1.48e-07,60;UBERON:0000949,3.62e-07,72;UBERON:0003929,3.94e-07,55;UBERON:0010314,7.71e-07,92
|phase1_expression=13.1322054625931,21.9854506812797,13.6499771816861,61.7026991065933,39.0698669358151,14.2697381125106,16.8201101228778,29.8274877150041,27.1722233752717,33.2371627377231,9.58820622062828,11.8062795313098,19.6880839420887,19.0576477273414,4.66353666541928,4.85940641735582,2.09868563438444,20.5050407482854,25.3661702170617,28.00971701867,12.8415368128115,0.496454756004426,0.783599367416806,6.87967418011649,4.12936705920906,17.2269589234506,19.8150518233174,15.2984575206981,8.93110071444957,7.81293402255785,5.32153225572731,0,0,0,24.2635360591071,20.613096024453,20.0085969137122,0,1.5626706890476,0.523523743973798,0.588231488031014,0.683045484958446,0.971020706062307,5.5394599909254,6.89363132292699,5.87349606917381,12.5182615095686,17.2239873540553,11.643367684927,7.19390626574849,10.7789544651529,17.2503077237966,29.8653038782771,36.9934692425786,22.1821907434026,22.8960898071993,12.8940047972441,8.76642556871652,8.29497489524351,12.1667925232568,15.2119536841483,12.5372476865579,8.00365316500025,3.1496490104849,6.92206453796882,2.8419204597844,6.5912024314049,8.06858441175265,9.12468588314603,8.6403800532282,7.57169860864975,13.9968982357864,12.589506834242,10.1667363348412,8.62609239164127,11.0306254393203,9.91042928994498,16.4716666129892,11.0596703944495,10.9465618816061,13.7231465403614,9.89735404057844,9.49222196604695,9.56696437053856,9.16789486660861,14.4368006882097,13.5253096759148,10.0655700745662,55.4315735198907,7.40601289046498,18.5513272769074,43.0211938490693,15.6393406752783,32.382191498269,19.4932925234301,4.48026887097336,8.56710962803686,10.3962496772615,8.83272415649754,8.48014978824817,18.0279577314151,21.815501160434,12.7402619853323,0,4.76280290224671,4.30711771307668,8.59391556525132,15.6431915215112,28.7421050848361,21.3756680253348,11.450031566565,29.8376168745898,25.1370892009104,28.335856423893,25.1639833270408,19.2269884734403,13.5957232253906,3.47038456607788,8.84610551949874,11.3236794963186,9.49618529379692,11.1521308221101,14.9113408974498,35.7192572354088,56.9695042532598,13.7946809812639,1.43778149407104,2.99951365496704,2.03312363316904,15.5782264981016,12.8100168789215,10.8062742817063,28.8548371519179,38.8687495142102,19.1165000994795,25.9586020908412,6.51771928642024,20.029522268225,9.09801930361229,40.404836330203,16.3951758133007,22.5304062344803,27.1893816006077,29.9902587493073,63.4100172090376,61.8789268975824,61.843138209421,43.9795730256327,4.52692785158969,3.59301552318857,4.22282697993477,2.6303487891309,3.61461423993277,8.00979983000983,16.2567887762275,2.9855140022774,0,0.257347907114715,1.42081749697796,4.97101854085205,4.69052119962192,4.50155153652537,4.49814997611899,5.3126342571799,5.55361606394562,9.76642567951713,6.17028823219124,8.75740067753771,8.06343264576054,8.86504306027114,10.2957388123237,16.9591985413385,35.5671186771502,48.3143107537338,19.767255165028,13.5834088340655,63.1099875499054,14.8092317331585,1.2797295032114,2.32236671860439,5.15469845288373,7.05892336181699,7.33847544688072,7.79925067061493,16.1339880925134,6.75265714368445,13.3207660664143,13.5290400987983,13.062593836981,22.4704852163555,34.3659499300764,52.1750135926442,4.74169752382704,6.16941968092536,3.38123207019241,5.90588850751411,6.0125271021964,13.1855341393799,13.1531997218455,4.87113488332687,23.863806631889,38.2531208157582,6.52195779591728,1.83529616287703,2.75182593158484,4.49724224769707,6.49152388443209,11.3353265083636,12.9859184408524,17.5494643844994,14.5921704097532,21.4157902286704,17.2521847832825,27.9105710751378,35.8843324081745,50.2631967114752,48.7960964779601,66.5772059481447,6.28160846566456,3.03186258832776,3.7481944581666,3.05541154395339,5.63256595892405,10.3853879613926,15.9489239393629,30.6359827136744,14.9753386900881,13.9522754478728,21.2074842314458,3.60499292374624,32.8101465545202,41.8035779300568,4.52373851817817,4.35124547054968,31.9646777462374,18.4877620024171,16.3761601787548,19.4571399743057,12.622990794004,61.8553771650714,14.5133780931478,17.9601822376454,21.3269163755471,8.84184552424442,7.79795359288379,8.20921939287614,13.7635638569464,14.3205370376543,19.3691011193797,23.4564560987919,15.4714692877013,5.52003371368491,7.00413925220377,6.26886467295635,31.8588332015911,1.21390318077491,6.04647113929502,8.11001842950362,8.85905678642318,11.6825356218692,13.1798429515793,13.8142817201452,12.4774082434652,18.3301319602773,32.6797686582496,26.8152412445286,38.8101150559318,10.0834212657534,14.746889951234,14.5749183821483,18.6207245324387,16.9450376721967,19.087686389846,24.9661258273971,6.10146440965647,20.1240467320629,20.5091410191115,16.6535115470895,20.3445177636841,15.0179183071108,15.1602876883983,17.8913580722117,25.358832786797,15.2048747648618,8.88528580148834,5.98521917093345,6.2966139305702,3.95573759709851,4.64760374251486,6.63456702298916,6.62915876976036,8.11718423477216,9.81219814011409,11.4560474161814,3.16335993581135,9.35269548783504,7.66837919834789,8.99079672862215,9.38959024108564,11.4634694427098,13.7204736504058,25.6520823144349,49.5129197974649,22.3682152711293,2.81846469342095,5.68162874967119,6.28742263736971,10.1114617938905,7.4912697617084,6.9272011451219,12.4398672964499,10.9371683268918,8.28388820963116,3.8653459332161,14.977560325409,69.5224465381992,2.8381530140623,4.72470402958205,6.62596197186755,25.4217907847824,35.9613252154089,38.58273929591,38.5469665925647,44.0213721773924,46.5623588662049,59.5882754158727,50.385724342452,60.2286128668462,79.3594165812853,10.4295976462997,6.65957860122194,4.12683740403588,10.5767308309369,16.227925898704,12.387043379778,16.4836461840539,14.5770497773765,14.0440189129902,27.1080884456192,22.0956113523445,28.6447756719698,25.6061241692095,30.8287133896789,39.2804826642644,26.3258775090404,31.9728054289197,31.7199686288943,36.2432218226274,3.1136204275253,3.59122386060928,3.41467211508268,8.0225216632537,6.70762120409543,7.35374033800057,12.2235700290888,7.62329711783909,11.8740107548972,10.3605856823157,7.09742039692671,8.48818536237343,11.2369808963859,11.6525777376862,11.3147873842558,10.4784612082276,12.051969898265,11.1887347868949,9.89006161927936,9.71512872887022,8.9146005620208,7.63145966485151,8.82213902805088,9.01147783120437,12.798875736485,9.89990912332615,9.87811053512972,9.47050961176234,12.6297825876651,9.53941861818155,9.96534152243063,9.94895271993191,9.00308294973317,11.9301367713194,11.9602098808308,9.99242311751784,12.8662384644975,15.4707158914775,13.7727599089567,9.70602244125868,13.216466630364
|short_description=p1@Arntl
}}

Latest revision as of 18:12, 25 September 2015

Short description:p1@Arntl
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Arntl_5end
Coexpression cluster:NA
Association with transcript: 35bp_to_ENSMUST00000047321, ENSMUST00000084703, ENSMUST00000106637, NM_001243048, NM_007489, uc009jhe.1, uc009jhf.1, uc012fsi.1_5end
EntrezGene:Arntl
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Arntl

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G713.13
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I521.99
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I613.65
CD326+ enterocyte, pool1.CNhs13542.11848-124I361.70
CD326+ enterocyte, pool2.CNhs13197.11849-124I439.07
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I714.27
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I816.82
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E929.83
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E727.17
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F233.24
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E69.59
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F111.81
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E419.69
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E819.06
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.86
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A220.51
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A425.37
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A628.01
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A312.84
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D16.88
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.13
GP2+ M cell, pool1.CNhs13228.11845-124H917.23
GP2+ M cell, pool2.CNhs13231.11846-124I119.82
GP2+ M cell, pool3.CNhs13240.11847-124I215.30
Ileum epithelium, pool1.CNhs13199.10252-104B98.93
Ileum epithelium, pool2.CNhs13232.10253-104C17.81
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.32
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F524.26
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F620.61
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F720.01
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.54
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D96.89
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35.87
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B712.52
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C217.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B811.64
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C410.78
Mouse Astrocytes, donor3.CNhs12107.11633-122C417.25
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A229.87
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I936.99
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A122.18
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C122.90
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E112.89
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C58.77
Mouse Granule cells, donor1.CNhs12131.11713-123C38.29
Mouse Granule cells, donor2.CNhs12357.11731-123E312.17
Mouse Granule cells, donor3.CNhs12108.11636-122C715.21
Mouse Meningeal cells, donor1.CNhs12132.11716-123C612.54
Mouse Meningeal cells, donor3.CNhs12109.11639-122D18.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E76.92
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C86.59
Mouse Microglia, donor2.CNhs12634.11736-123E88.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.12
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.64
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.57
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F114.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D512.59
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D210.17
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.63
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.03
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F316.47
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D711.06
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.95
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F413.72
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D89.90
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.49
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.57
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.17
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D614.44
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F613.53
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E110.07
Mouse Schwann, donor1.CNhs12507.11728-123D955.43
Mouse Schwann, donor2.CNhs12573.11746-123F97.41
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G318.55
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F743.02
Mouse hepatocyte, donor1.CNhs13078.11714-123C415.64
Mouse hepatocyte, donor3.CNhs12615.11637-122C832.38
Mouse hepatocyte, donor6.CNhs13090.11822-124F419.49
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.48
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A78.57
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I710.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E38.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I88.48
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G618.03
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H121.82
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.31
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G38.59
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B615.64
accessory axillary lymph node, adult.CNhs10475.1063-29H928.74
adrenal gland, adult.CNhs10508.49-24D721.38
adrenal gland, embryo E14.CNhs11038.406-44C511.45
adrenal gland, embryo E16.CNhs11004.1254-43D629.84
adrenal gland, embryo E17.CNhs11043.1263-45I125.14
adrenal gland, embryo E18.CNhs11026.1262-18F528.34
adrenal gland, neonate N00.CNhs11191.1311-23C125.16
adrenal gland, neonate N25.CNhs11223.1377-27I319.23
amnion, adult pregnant day17.5.CNhs10488.583-22A813.60
aorta, adult.CNhs10498.46-23H13.47
bone (os femoris), adult.CNhs10483.56-12G28.85
bone (os femoris), neonate N02.CNhs11227.1985-43F511.32
bone (os femoris), neonate N16.CNhs11225.1525-43A69.50
bone (os femoris), neonate N20.CNhs11195.1350-25C311.15
cecum, adult.CNhs10467.37-13H414.91
cerebellum, adult.CNhs10494.15-8B235.72
cerebellum, neonate N30.CNhs11135.1395-42I256.97
colon, adult.CNhs10468.36-18H713.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.44
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.03
corpora quadrigemina, adult.CNhs10501.16-22A415.58
corpus striatum, adult.CNhs10487.19-21D812.81
corpus striatum, neonate N00.CNhs11226.630-43F110.81
cortex, adult.CNhs10473.12-14D528.85
cortex, neonate N30.CNhs11107.1392-42F238.87
diencephalon, adult.CNhs10482.20-12F219.12
diencephalon, neonate N30.CNhs11201.1388-42B225.96
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.52
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A220.03
epididymis, adult.CNhs10490.58-23B29.10
eyeball, adult.CNhs10484.31-12G440.40
eyeball, embryo E12.CNhs11016.345-16C616.40
eyeball, embryo E14.CNhs10521.399-16E222.53
eyeball, embryo E15.CNhs10593.426-16C927.19
eyeball, embryo E17.CNhs11023.1261-18D429.99
eyeball, neonate N00.CNhs11207.633-15C663.41
eyeball, neonate N01.CNhs11140.1532-43E761.88
eyeball, neonate N02.CNhs11205.1551-44G861.84
eyeball, neonate N16.CNhs11188.777-19A243.98
forelimb, embryo E11.CNhs10596.335-25E24.53
forelimb, embryo E12.CNhs10600.359-14H23.59
forelimb, embryo E13.CNhs10589.384-1E24.22
forelimb, embryo E14.CNhs10577.413-26A82.63
forelimb, embryo E15.CNhs11007.437-20E73.61
forelimb, embryo E17.CNhs10598.1517-43C48.01
forelimb, embryo E18.CNhs11008.1520-43B516.26
gonad, embryo E13.CNhs11044.1564-45I62.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E94.97
heart, embryo E12.CNhs11015.353-12F54.69
heart, embryo E13.CNhs11013.376-3I94.50
heart, embryo E14.CNhs10597.403-26D44.50
heart, embryo E15.CNhs11017.431-16C85.31
heart, embryo E16.CNhs11021.457-17C65.55
heart, embryo E17.CNhs11025.479-18E59.77
heart, embryo E18.CNhs11030.1283-20G36.17
heart, neonate N00.CNhs11213.639-21E38.76
heart, neonate N03.CNhs11221.1349-25I28.06
heart, neonate N10.CNhs11118.749-24G18.87
heart, neonate N16.CNhs11209.782-15G110.30
heart, neonate N20.CNhs11127.821-26I616.96
heart, neonate N25.CNhs11196.1351-25D335.57
heart, neonate N30.CNhs11202.1390-42D248.31
hippocampus, adult.CNhs10478.13-16E819.77
hippocampus, neonate N00.CNhs11228.627-43G113.58
intestinal mucosa, adult.CNhs10506.860-29I363.11
intestine, adult.CNhs10496.178-9A314.81
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D52.32
intestine, embryo E15.CNhs10602.976-16D85.15
intestine, embryo E16.CNhs10585.463-22H47.06
intestine, embryo E17.CNhs10582.482-18D37.34
intestine, embryo E18.CNhs10526.1289-20F77.80
intestine, neonate N00.CNhs11126.644-26D116.13
intestine, neonate N01.CNhs11192.1322-23E96.75
intestine, neonate N06.CNhs11102.688-20B813.32
intestine, neonate N07.CNhs11095.720-20F213.53
intestine, neonate N10.CNhs11098.755-23A513.06
intestine, neonate N20.CNhs11187.827-18D122.47
intestine, neonate N25.CNhs11121.1352-25E334.37
intestine, neonate N30.CNhs11131.1384-42G152.18
kidney, embryo E14.CNhs10606.411-4I94.74
kidney, embryo E15.CNhs10997.434-16F86.17
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I25.91
kidney, embryo E18.CNhs11001.1288-20C76.01
kidney, neonate N00.CNhs11214.646-21G713.19
kidney, neonate N10.CNhs11206.758-6D513.15
kidney, neonate N20.CNhs11113.832-19I14.87
kidney, neonate N25.CNhs11122.1353-25F323.86
kidney, neonate N30.CNhs11203.1385-42H138.25
liver, adult pregnant day01.CNhs10466.508-5B26.52
liver, embryo E12.CNhs10601.355-15F81.84
liver, embryo E13.CNhs10524.378-3H62.75
liver, embryo E14.CNhs10594.409-16E14.50
liver, embryo E15.CNhs10520.433-16D76.49
liver, embryo E16.CNhs10523.462-17F511.34
liver, embryo E17.CNhs10510.481-18A312.99
liver, embryo E18.CNhs10579.499-43G417.55
liver, neonate N00.CNhs11117.641-24F414.59
liver, neonate N03.CNhs11123.1345-25G221.42
liver, neonate N06.CNhs11101.684-20A817.25
liver, neonate N07.CNhs11103.716-20H227.91
liver, neonate N10.CNhs11115.751-24B935.88
liver, neonate N20.CNhs11220.823-25A350.26
liver, neonate N25.CNhs11198.1368-26H148.80
liver, neonate N30.CNhs11106.1382-42D166.58
lung, adult.CNhs10474.28-22B16.28
lung, embryo E12.CNhs10522.354-16G23.03
lung, embryo E14.CNhs10604.404-26F83.75
lung, embryo E15.CNhs11020.432-17C53.06
lung, embryo E16.CNhs10998.458-17B65.63
lung, embryo E17.CNhs10605.480-44A610.39
lung, embryo E18.CNhs10583.1287-20I615.95
lung, neonate N00.CNhs11224.640-42C630.64
lung, neonate N06.CNhs11212.683-20E514.98
lung, neonate N07.CNhs11111.715-19A313.95
lung, neonate N10.CNhs11219.750-23E621.21
lung, neonate N20.CNhs11109.822-18A43.60
lung, neonate N25.CNhs11119.1359-25C732.81
lung, neonate N30.CNhs11133.1394-42H241.80
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.35
mammary gland, adult lactating day02.CNhs10480.595-22B631.96
mammary gland, adult pregnant day19.CNhs10476.588-5H218.49
medulla oblongata, adult.CNhs10477.17-12C216.38
medulla oblongata, neonate N30.CNhs11200.1396-42A319.46
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C712.62
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C261.86
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E114.51
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E217.96
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E321.33
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D78.84
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D87.80
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D98.21
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D413.76
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D514.32
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D619.37
olfactory brain, adult.CNhs10489.18-22I923.46
ovary, adult.CNhs10507.91-2I715.47
ovary, embryo E18.CNhs11040.505-44H75.52
ovary, neonate N00.CNhs11217.1299-22I47.00
oviduct, adult pregnant day01.CNhs10500.988-6G66.27
pancreas, adult.CNhs10486.34-16E431.86
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F26.05
pancreas, embryo E16.CNhs11003.460-26E58.11
pancreas, embryo E17.CNhs10599.1558-45G38.86
pancreas, embryo E18.CNhs10580.1535-43I711.68
pancreas, neonate N00.CNhs11105.645-26G913.18
pancreas, neonate N01.CNhs11138.1531-43D713.81
pancreas, neonate N02.CNhs11139.1539-43D812.48
pancreas, neonate N16.CNhs11136.787-43B618.33
pancreas, neonate N25.CNhs11094.1555-45E232.68
pancreas, neonate N30.CNhs11182.1548-44H526.82
pituitary gland, adult.CNhs10493.21-1G838.81
pituitary gland, embryo E12.CNhs11018.346-16E610.08
pituitary gland, embryo E13.CNhs11009.370-44C714.75
pituitary gland, embryo E14.CNhs11037.398-44A514.57
pituitary gland, embryo E15.CNhs10592.427-16B918.62
pituitary gland, embryo E16.CNhs11036.449-43F616.95
pituitary gland, embryo E17.CNhs11039.1265-44F519.09
pituitary gland, neonate N00.CNhs11190.1308-22E924.97
placenta, adult pregnant day10.CNhs10472.539-13I76.10
placenta, adult pregnant day17.CNhs10464.577-18G320.12
prostate, adult.CNhs10470.859-1F820.51
skin, adult.CNhs10492.30-1C316.65
skin, neonate N00.CNhs11124.650-25G420.34
skin, neonate N03.CNhs11215.662-22H315.02
skin, neonate N06.CNhs11097.693-20I515.16
skin, neonate N10.CNhs11108.762-6C417.89
small intestine, neonate N16.CNhs11114.790-21I125.36
spinal cord, adult.CNhs10505.24-13C915.20
spleen, adult.CNhs10465.25-2G28.89
spleen, embryo E16.CNhs11035.461-43C15.99
spleen, embryo E18.CNhs11011.1271-21F26.30
spleen, neonate N10.CNhs11116.752-24D13.96
spleen, neonate N20.CNhs11112.824-19H14.65
spleen, neonate N25.CNhs11099.1354-25G36.63
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.63
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C98.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D39.81
stomach, adult.CNhs10503.33-1H611.46
stomach, embryo E12.CNhs10588.356-43E33.16
stomach, embryo E15.CNhs10603.1252-16G89.35
stomach, embryo E16.CNhs11022.459-17D47.67
stomach, embryo E17.CNhs11006.1035-18D58.99
stomach, embryo E18.CNhs10999.1286-20C69.39
stomach, neonate N03.CNhs11193.1340-24B811.46
stomach, neonate N07.CNhs11210.718-18A913.72
stomach, neonate N25.CNhs11104.1355-25E425.65
stomach, neonate N30.CNhs11134.1386-42I149.51
submandibular gland, adult.CNhs10469.59-29C122.37
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F55.68
testis, embryo E15.CNhs11034.443-27C56.29
testis, embryo E16.CNhs11033.470-26G510.11
testis, embryo E17.CNhs11029.486-18I57.49
testis, embryo E18.CNhs11027.503-18G56.93
testis, neonate N00.CNhs11189.1300-22B712.44
testis, neonate N07.CNhs11222.726-26I410.94
testis, neonate N10.CNhs11204.763-44D98.28
testis, neonate N20.CNhs11110.839-18H33.87
testis, neonate N30.CNhs11130.1391-42E214.98
thymus, adult.CNhs10471.38-12B569.52
thymus, embryo E14.CNhs11041.402-44I42.84
thymus, embryo E15.CNhs11005.430-45I24.72
thymus, embryo E16.CNhs11002.456-26C56.63
thymus, embryo E17.CNhs10581.478-18C125.42
thymus, embryo E18.CNhs10595.1273-19G435.96
thymus, neonate N02.CNhs11181.1541-43F838.58
thymus, neonate N03.CNhs11137.2104-43C738.55
thymus, neonate N06.CNhs11197.681-26C444.02
thymus, neonate N07.CNhs11211.713-19D346.56
thymus, neonate N10.CNhs11194.748-24E459.59
thymus, neonate N20.CNhs11186.820-7A250.39
thymus, neonate N25.CNhs11125.1362-25G760.23
thymus, neonate N30.CNhs11132.1393-42G279.36
tongue, adult.CNhs10499.32-1B410.43
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H36.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.13
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G510.58
urinary bladder, adult.CNhs10481.879-12E416.23
uterus, adult pregnant day19.CNhs10497.590-15F512.39
uterus, adult.CNhs10509.92-27E516.48
vagina, adult.CNhs10502.89-27D514.58
vesicular gland, adult.CNhs10491.51-27F814.04
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A127.11
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A222.10
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A328.64
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D725.61
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A430.83
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A539.28
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A626.33
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A731.97
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A831.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A936.24
whole body, embryo E11.CNhs11014.324-5I83.11
whole body, embryo E12.CNhs10587.857-27C93.59
whole body, embryo E13.CNhs10512.372-23H23.41
whole body, embryo E14.5.CNhs10578.420-27D28.02
whole body, embryo E14.CNhs10519.395-14B16.71
whole body, embryo E16.CNhs10514.453-14F27.35
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G512.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G511.87
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.36
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.49
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G511.24
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.65
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G511.31
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G512.05
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G511.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.89
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G59.72
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.91
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.63
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.82
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.01
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G512.80
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.90
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G59.88
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G59.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G512.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G59.97
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G59.95
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.93
whole body, embryo E17.5.CNhs10513.490-9F911.96
whole body, embryo E17.CNhs10517.475-3I59.99
whole body, embryo E18.CNhs10516.493-3B312.87
whole body, neonate N00.CNhs10525.657-19C215.47
whole body, neonate N01.CNhs10576.659-23C613.77
whole body, neonate N06.CNhs10515.692-21D19.71
whole body, neonate N10.CNhs10518.761-6B413.22





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
epithelium1.33e-09174
ecto-epithelium1.52e-0973
cell layer2.03e-09176
ectoderm-derived structure1.11e-0895
ectoderm1.11e-0895
presumptive ectoderm1.11e-0895
gland1.30e-0865
neurectoderm3.95e-0864
neural plate3.95e-0864
presumptive neural plate3.95e-0864
craniocervical region4.09e-0836
organ system subdivision7.86e-08194
endocrine gland1.48e-0760
endocrine system3.62e-0772
gut epithelium3.94e-0755
structure with developmental contribution from neural crest7.71e-0792
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