FFCP PHASE1:Mm9::chr16:76403918..76403962,-: Difference between revisions
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{{FFCP|EntrezGene=100039316,14109|HGNC=|MCL_coexpression_id=586|UniProt=Q642K5|association_with_transcript=0bp_to_ENSMUST00000052867_5end|description=CAGE_peak_1_at_Gm9843_5end,CAGE_peak_2_at_Fau_5end|id=chr16:76403918..76403962,-|ontology_enrichment_celltype=CL:0000063!1.38e-21!66;CL:0002320!1.82e-15!46;CL:0000134!1.82e-15!46;CL:0000219!4.25e-13!54;CL:0000144!3.84e-12!121;CL:0000012!3.84e-12!121;CL:0000988!6.14e-11!32;CL:0002032!6.14e-11!32;CL:0000037!6.14e-11!32;CL:0000566!6.14e-11!32;CL:0000837!6.14e-11!32;CL:0002371!7.57e-11!118;CL:0000548!1.98e-09!115;CL:0000004!1.98e-09!115;CL:0000255!1.98e-09!115;CL:0000034!3.78e-09!97;CL:0002031!8.80e-08!25;CL:0000723!1.15e-07!91;CL:0000048!1.15e-07!91;CL:0000066!3.23e-07!25|ontology_enrichment_celltype_v019_2=CL:0002320,1.82e-15,46;CL:0000134,1.82e-15,46;CL:0000219,4.25e-13,54;CL:0000988,6.14e-11,32;CL:0002032,6.14e-11,32;CL:0000037,6.14e-11,32;CL:0000837,6.14e-11,32;CL:0000034,3.78e-09,97;CL:0002031,8.80e-08,25;CL:0000723,1.15e-07,91;CL:0000048,1.15e-07,91;CL:0000066,3.23e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!1.82e-15!46;UBERON:0002405!1.32e-09!70;UBERON:0000490!4.39e-09!66;UBERON:0001007!8.10e-09!128;UBERON:0001555!8.10e-09!128;UBERON:0007026!8.10e-09!128;UBERON:0004119!1.25e-08!130;UBERON:0000925!1.25e-08!130;UBERON:0006595!1.25e-08!130;UBERON:0002193!2.61e-08!48;UBERON:0000344!2.75e-08!15;UBERON:0004921!3.92e-08!126;UBERON:0004185!3.92e-08!126;UBERON:0005409!1.09e-07!59;UBERON:0002390!1.71e-07!45;UBERON:0003061!1.71e-07!45;UBERON:0001242!2.34e-07!13;UBERON:0000060!2.34e-07!13;UBERON:0001262!2.34e-07!13;UBERON:0004786!2.34e-07!13;UBERON:0004923!2.56e-07!24;UBERON:0000160!6.45e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.82e-15,46;UBERON:0000490,4.39e-09,66;UBERON:0002193,2.61e-08,48;UBERON:0002405,2.61e-08,48;UBERON:0000344,2.75e-08,15;UBERON:0001007,1.28e-07,116;UBERON:0001555,1.28e-07,116;UBERON:0007026,1.28e-07,116;UBERON:0002390,1.71e-07,45;UBERON:0003061,1.71e-07,45;UBERON:0004119,1.95e-07,118;UBERON:0000925,1.95e-07,118;UBERON:0006595,1.95e-07,118;UBERON:0001242,2.34e-07,13;UBERON:0001262,2.34e-07,13;UBERON:0004786,2.34e-07,13;UBERON:0004923,2.56e-07,24;UBERON:0004921,5.59e-07,114;UBERON:0005409,8.15e-07,47|phase1_expression=40.9981048588273,77.8215159035775,90.0898493991281,47.7893453864791,68.1218192727032,48.8528681263599,50.9275556498246,66.3693882489702,88.274528789095,77.2412936862578,57.0155834190932,61.7436510623904,36.9793576651404,37.5907730401689,35.3096347524602,41.912380349694,51.0680171033547,73.029491280432,64.9922415291202,84.02915105601,25.598030335472,67.517846816602,70.7851428566515,62.2370524666352,68.5933750390838,114.272160858889,82.7063032625424,84.8956656782403,79.0497424938515,66.5359542566217,82.7054804744287,41.9120244483357,17.8368788399525,47.5445043046316,78.5676405723467,74.4731211206046,84.5261134926208,164.901462510342,229.712591289997,123.028079833843,197.645779978421,176.225735119279,173.327196032122,38.1467358465999,28.0814099478055,26.9813725677672,95.4517440104608,17.0059621976748,26.5820281108711,17.6931208157598,17.778275546421,15.8127820801469,65.6029989685749,50.7753499407941,37.642505503956,33.1864672486372,33.2378790328958,33.0030139057563,26.5034563726073,30.6814767977779,20.2826049121977,55.5705032593377,38.239676232779,77.3913756862003,104.819834432099,88.8100143682625,41.6444153620583,44.5693234173003,30.5884356310009,30.6463480012938,18.0879466762189,25.1372866275347,29.3755159465646,19.4760370751777,12.172374819316,17.4651569455904,7.70811166995721,13.0241084846891,13.8245879930619,18.9916254331479,17.6571152152651,17.7110545989298,21.217907924105,20.2594539611405,15.4326230254578,21.2132581541041,17.938831780687,25.7231235238915,49.6763828265687,28.0370487996174,22.8992946074325,62.8109430196412,44.8781080247115,51.8115063972304,48.7332313085752,42.5625542742469,20.0835520788405,48.4022116121684,57.9322790264397,32.153901280441,46.6191719460812,25.6652954828636,12.7402619853323,0,63.8648570983082,53.965651346196,51.5634933915079,47.0437584442527,30.0367945030719,11.5784868470563,41.9834490774049,41.4073050504512,27.9044751679831,25.4721262533932,27.0454026412121,20.7349875693965,19.5284024510155,12.1463459812726,21.230653246797,19.2502551437417,15.0172232553068,18.4252596191384,33.550517019262,4.9772735491963,13.1951425292477,29.1221042937794,116.819746393272,63.5896894853012,153.754974758408,11.2342979553617,10.5225138648284,18.8481528169297,9.73416193076748,13.8086346958378,8.72709787150152,12.4925772562173,27.8021463311363,33.2166611528948,43.9737599674594,11.7847439296425,30.9686654251235,26.8985462187163,19.086585759367,22.0029034040144,22.7241907165435,17.8078071195941,18.646643187386,10.6068382002996,31.472926968195,18.1541836961106,17.4191612922309,16.001288467213,26.970583174883,16.716103993064,23.4591635505056,21.6947350832158,66.0080396074441,53.0136688656313,89.5115023096117,18.8484453007307,31.426492037466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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100039316,14109 | |||
|HGNC= | |||
|MCL_coexpression_id=586 | |||
|TSSclassifier=NA | |||
|UniProt=Q642K5 | |||
|association_with_transcript=0bp_to_ENSMUST00000052867_5end | |||
|cluster_id=chr16:76403918..76403962,- | |||
|description=CAGE_peak_1_at_Gm9843_5end,CAGE_peak_2_at_Fau_5end | |||
|id=chr16:76403918..76403962,- | |||
|ontology_enrichment_celltype=CL:0000063!1.38e-21!66;CL:0002320!1.82e-15!46;CL:0000134!1.82e-15!46;CL:0000219!4.25e-13!54;CL:0000144!3.84e-12!121;CL:0000012!3.84e-12!121;CL:0000988!6.14e-11!32;CL:0002032!6.14e-11!32;CL:0000037!6.14e-11!32;CL:0000566!6.14e-11!32;CL:0000837!6.14e-11!32;CL:0002371!7.57e-11!118;CL:0000548!1.98e-09!115;CL:0000004!1.98e-09!115;CL:0000255!1.98e-09!115;CL:0000034!3.78e-09!97;CL:0002031!8.80e-08!25;CL:0000723!1.15e-07!91;CL:0000048!1.15e-07!91;CL:0000066!3.23e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,1.82e-15,46;CL:0000134,1.82e-15,46;CL:0000219,4.25e-13,54;CL:0000988,6.14e-11,32;CL:0002032,6.14e-11,32;CL:0000037,6.14e-11,32;CL:0000837,6.14e-11,32;CL:0000034,3.78e-09,97;CL:0002031,8.80e-08,25;CL:0000723,1.15e-07,91;CL:0000048,1.15e-07,91;CL:0000066,3.23e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.82e-15!46;UBERON:0002405!1.32e-09!70;UBERON:0000490!4.39e-09!66;UBERON:0001007!8.10e-09!128;UBERON:0001555!8.10e-09!128;UBERON:0007026!8.10e-09!128;UBERON:0004119!1.25e-08!130;UBERON:0000925!1.25e-08!130;UBERON:0006595!1.25e-08!130;UBERON:0002193!2.61e-08!48;UBERON:0000344!2.75e-08!15;UBERON:0004921!3.92e-08!126;UBERON:0004185!3.92e-08!126;UBERON:0005409!1.09e-07!59;UBERON:0002390!1.71e-07!45;UBERON:0003061!1.71e-07!45;UBERON:0001242!2.34e-07!13;UBERON:0000060!2.34e-07!13;UBERON:0001262!2.34e-07!13;UBERON:0004786!2.34e-07!13;UBERON:0004923!2.56e-07!24;UBERON:0000160!6.45e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.82e-15,46;UBERON:0000490,4.39e-09,66;UBERON:0002193,2.61e-08,48;UBERON:0002405,2.61e-08,48;UBERON:0000344,2.75e-08,15;UBERON:0001007,1.28e-07,116;UBERON:0001555,1.28e-07,116;UBERON:0007026,1.28e-07,116;UBERON:0002390,1.71e-07,45;UBERON:0003061,1.71e-07,45;UBERON:0004119,1.95e-07,118;UBERON:0000925,1.95e-07,118;UBERON:0006595,1.95e-07,118;UBERON:0001242,2.34e-07,13;UBERON:0001262,2.34e-07,13;UBERON:0004786,2.34e-07,13;UBERON:0004923,2.56e-07,24;UBERON:0004921,5.59e-07,114;UBERON:0005409,8.15e-07,47 | |||
|phase1_expression=40.9981048588273,77.8215159035775,90.0898493991281,47.7893453864791,68.1218192727032,48.8528681263599,50.9275556498246,66.3693882489702,88.274528789095,77.2412936862578,57.0155834190932,61.7436510623904,36.9793576651404,37.5907730401689,35.3096347524602,41.912380349694,51.0680171033547,73.029491280432,64.9922415291202,84.02915105601,25.598030335472,67.517846816602,70.7851428566515,62.2370524666352,68.5933750390838,114.272160858889,82.7063032625424,84.8956656782403,79.0497424938515,66.5359542566217,82.7054804744287,41.9120244483357,17.8368788399525,47.5445043046316,78.5676405723467,74.4731211206046,84.5261134926208,164.901462510342,229.712591289997,123.028079833843,197.645779978421,176.225735119279,173.327196032122,38.1467358465999,28.0814099478055,26.9813725677672,95.4517440104608,17.0059621976748,26.5820281108711,17.6931208157598,17.778275546421,15.8127820801469,65.6029989685749,50.7753499407941,37.642505503956,33.1864672486372,33.2378790328958,33.0030139057563,26.5034563726073,30.6814767977779,20.2826049121977,55.5705032593377,38.239676232779,77.3913756862003,104.819834432099,88.8100143682625,41.6444153620583,44.5693234173003,30.5884356310009,30.6463480012938,18.0879466762189,25.1372866275347,29.3755159465646,19.4760370751777,12.172374819316,17.4651569455904,7.70811166995721,13.0241084846891,13.8245879930619,18.9916254331479,17.6571152152651,17.7110545989298,21.217907924105,20.2594539611405,15.4326230254578,21.2132581541041,17.938831780687,25.7231235238915,49.6763828265687,28.0370487996174,22.8992946074325,62.8109430196412,44.8781080247115,51.8115063972304,48.7332313085752,42.5625542742469,20.0835520788405,48.4022116121684,57.9322790264397,32.153901280441,46.6191719460812,25.6652954828636,12.7402619853323,0,63.8648570983082,53.965651346196,51.5634933915079,47.0437584442527,30.0367945030719,11.5784868470563,41.9834490774049,41.4073050504512,27.9044751679831,25.4721262533932,27.0454026412121,20.7349875693965,19.5284024510155,12.1463459812726,21.230653246797,19.2502551437417,15.0172232553068,18.4252596191384,33.550517019262,4.9772735491963,13.1951425292477,29.1221042937794,116.819746393272,63.5896894853012,153.754974758408,11.2342979553617,10.5225138648284,18.8481528169297,9.73416193076748,13.8086346958378,8.72709787150152,12.4925772562173,27.8021463311363,33.2166611528948,43.9737599674594,11.7847439296425,30.9686654251235,26.8985462187163,19.086585759367,22.0029034040144,22.7241907165435,17.8078071195941,18.646643187386,10.6068382002996,31.472926968195,18.1541836961106,17.4191612922309,16.001288467213,26.970583174883,16.716103993064,23.4591635505056,21.6947350832158,66.0080396074441,53.0136688656313,89.5115023096117,18.8484453007307,31.4264920374669,28.4498057108403,15.6251525486239,22.0375939557092,23.6028682717689,12.7893669612724,24.9494263301646,22.6524764192309,14.6458266422998,21.6701052584406,14.7545233373457,19.5907983149945,16.2467085315377,15.2995317386824,11.3556572224629,20.4780178634776,37.3373224771692,33.056320832943,35.1925613383136,21.8302471548812,18.9435168143477,21.176770085451,24.6839628667806,22.446623881282,48.4019642775402,32.9397909448022,38.202951737641,39.7912944082302,23.0057622800562,33.2563181202062,47.334232922558,37.8368419183298,32.2435431620239,28.9048736902614,20.2873924211545,20.3651327845314,25.407775818959,31.5611189506434,24.9784321640816,23.0271830848179,29.2017633784957,34.9213973898695,29.941715335802,24.1925403288336,27.125141325622,20.9121764517914,25.3575151735629,24.3588931349941,37.6846260636501,18.1248566594011,55.125977103512,56.2850897035567,11.5014565221884,36.0976719238448,48.0538016596423,33.0878330110716,38.9292387342549,36.6657076236159,13.8564892624954,39.2247222364903,18.578007314391,28.856664581782,22.9996443322732,15.0755631697634,17.853273066451,26.3430424608028,18.7585821486367,20.8176808269848,15.9454768657487,23.9240439484977,23.8305274974936,23.5777965487864,21.1107797514981,38.0733978673097,23.1129208318947,27.5936746304732,13.6468001489623,16.7612711826851,106.229844604086,16.915552122693,21.4545589203055,21.8645696806118,17.4492952163567,15.2940030689633,20.0518806674155,14.4369030702305,26.3126956088681,29.2255857911312,22.9266911208984,6.42642632843614,9.9358059645788,32.9421366784422,22.4784003907935,16.332042174281,18.5843193675948,53.8973012264059,37.7904446205939,45.0766140616596,26.5771703592696,22.4427657999067,26.876542489495,36.7169066772281,43.1361827845513,30.0234920039025,42.1674434299995,38.1601510018291,19.0646179222121,26.8291030106652,41.1360614429159,23.148399783412,25.8916741117719,38.3492957844452,27.4796864405542,50.2367166039089,20.8857820176702,26.9026729997052,40.356696844058,23.9085066765146,23.7352707242981,24.1251699712623,26.9781497447088,18.0554989719567,40.8073171281791,9.82754100655701,28.8771788548371,30.5452564585569,33.5202094539178,44.6433243101118,45.5191778311014,47.3570818537502,73.7706386173332,76.2735415163936,72.8313861949313,44.8695190467103,20.2455035891927,17.6887936400358,22.897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| |||
|short_description=p1@Gm9843,p2@Fau | |||
}} |
Latest revision as of 18:20, 25 September 2015
Short description: | p1@Gm9843, p2@Fau |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm9843_5end, CAGE_peak_2_at_Fau_5end |
Coexpression cluster: | MCL_coexpression_mm9:586 |
Association with transcript: | 0bp_to_ENSMUST00000052867_5end |
EntrezGene: | 100039316,14109 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 1.82e-15 | 46 |
mesenchymal cell | 1.82e-15 | 46 |
motile cell | 4.25e-13 | 54 |
hematopoietic cell | 6.14e-11 | 32 |
hematopoietic oligopotent progenitor cell | 6.14e-11 | 32 |
hematopoietic stem cell | 6.14e-11 | 32 |
hematopoietic multipotent progenitor cell | 6.14e-11 | 32 |
stem cell | 3.78e-09 | 97 |
hematopoietic lineage restricted progenitor cell | 8.80e-08 | 25 |
somatic stem cell | 1.15e-07 | 91 |
multi fate stem cell | 1.15e-07 | 91 |
epithelial cell | 3.23e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.82e-15 | 46 |
unilaminar epithelium | 4.39e-09 | 66 |
hemolymphoid system | 2.61e-08 | 48 |
immune system | 2.61e-08 | 48 |
mucosa | 2.75e-08 | 15 |
digestive system | 1.28e-07 | 116 |
digestive tract | 1.28e-07 | 116 |
primitive gut | 1.28e-07 | 116 |
hematopoietic system | 1.71e-07 | 45 |
blood island | 1.71e-07 | 45 |
endoderm-derived structure | 1.95e-07 | 118 |
endoderm | 1.95e-07 | 118 |
presumptive endoderm | 1.95e-07 | 118 |
intestinal mucosa | 2.34e-07 | 13 |
wall of intestine | 2.34e-07 | 13 |
gastrointestinal system mucosa | 2.34e-07 | 13 |
organ component layer | 2.56e-07 | 24 |
subdivision of digestive tract | 5.59e-07 | 114 |
gastrointestinal system | 8.15e-07 | 47 |