FFCP PHASE1:Mm9::chr19:41922780..41922800,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=212398 | |EntrezGene=212398 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K025,B2RU64 | |UniProt=Q8K025,B2RU64 | ||
|association_with_transcript=-158bp_to_ENSMUST00000059231,NM_177603,uc008hmj.2_5end | |association_with_transcript=-158bp_to_ENSMUST00000059231,NM_177603,uc008hmj.2_5end | ||
|cluster_id=chr19:41922780..41922800,- | |||
|description=CAGE_peak_3_at_Frat2_5end | |description=CAGE_peak_3_at_Frat2_5end | ||
|id=chr19:41922780..41922800,- | |id=chr19:41922780..41922800,- | ||
|ontology_enrichment_celltype=CL:0002563!1.07e-08!9;CL:0002251!1.07e-08!9;CL:0000063!7.74e-08!66 | |ontology_enrichment_celltype=CL:0002563!1.07e-08!9;CL:0002251!1.07e-08!9;CL:0000063!7.74e-08!66 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.22e-16,9;CL:0002251,2.22e-16,9;CL:0002250,1.99e-13,3;CL:0000791,2.09e-11,9;CL:0000789,2.09e-11,9;CL:0002420,2.09e-11,9;CL:0002419,2.09e-11,9;CL:0000790,2.09e-11,9;CL:0002076,1.27e-09,15;CL:0000066,1.87e-09,25;CL:0000223,1.95e-09,20;CL:0000084,2.71e-09,11;CL:0000827,2.71e-09,11;CL:0000624,1.23e-08,8;CL:0000838,1.68e-08,12;CL:0000542,7.91e-08,13;CL:0000051,7.91e-08,13;CL:0000239,9.79e-07,6;CL:0000677,9.79e-07,6;CL:0000584,9.79e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.69e-10!15;UBERON:0004923!1.89e-10!24;UBERON:0000485!8.28e-10!11;UBERON:0001242!7.76e-09!13;UBERON:0000060!7.76e-09!13;UBERON:0001262!7.76e-09!13;UBERON:0004786!7.76e-09!13;UBERON:0003350!1.07e-08!9;UBERON:0004808!1.07e-08!9;UBERON:0001277!1.07e-08!9;UBERON:0005409!1.97e-08!59;UBERON:0000160!3.56e-07!43;UBERON:0001007!3.93e-07!128;UBERON:0001555!3.93e-07!128;UBERON:0007026!3.93e-07!128;UBERON:0004119!9.14e-07!130;UBERON:0000925!9.14e-07!130;UBERON:0006595!9.14e-07!130 | |ontology_enrichment_uberon=UBERON:0000344!1.69e-10!15;UBERON:0004923!1.89e-10!24;UBERON:0000485!8.28e-10!11;UBERON:0001242!7.76e-09!13;UBERON:0000060!7.76e-09!13;UBERON:0001262!7.76e-09!13;UBERON:0004786!7.76e-09!13;UBERON:0003350!1.07e-08!9;UBERON:0004808!1.07e-08!9;UBERON:0001277!1.07e-08!9;UBERON:0005409!1.97e-08!59;UBERON:0000160!3.56e-07!43;UBERON:0001007!3.93e-07!128;UBERON:0001555!3.93e-07!128;UBERON:0007026!3.93e-07!128;UBERON:0004119!9.14e-07!130;UBERON:0000925!9.14e-07!130;UBERON:0006595!9.14e-07!130 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.21e-16,15;UBERON:0003350,2.22e-16,9;UBERON:0004808,2.22e-16,9;UBERON:0001277,2.22e-16,9;UBERON:0001242,7.91e-15,13;UBERON:0001262,7.91e-15,13;UBERON:0004786,7.91e-15,13;UBERON:0000160,2.45e-14,31;UBERON:0000485,2.60e-13,11;UBERON:0004923,5.37e-10,24;UBERON:0005409,7.90e-09,47 | |||
|phase1_expression=0.320297694209588,0.348975407639361,0.454999239389536,0.90739263392049,2.50447864973174,1.6787927191189,1.63528848416868,1.42035655785734,7.32101355188667,7.95819389494778,0,0.159544317990673,0.171200729931206,0.874204024189974,0.666219523631325,0.607425802169478,2.79824751251259,0,0,0.42438965179803,0,0.397163804803541,0,2.07990149631429,0.91763712426868,0,0,1.07735616342945,0.190023419456374,0.252030129759931,1.10865255327652,0,0,0,3.75507105676657,1.66234645358492,3.06254034393554,0.418531630736908,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0.279972843250725,0,0.335565212115473,1.45072428402269,1.34437519656986,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0.135005938331691,0.210324961351382,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0.186399445825301,0.151452386666368,0.453429360640713,1.44932244350839,0,0,0,0,0,0.280888840263504,0,0,0,0.845060518660083,0,0,0,0,0.506719730950197,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0.662524555381181,0,0,0,0,1.78819938646014,1.1981512450592,0.599902730993408,0.889491589511453,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0.260240885925407,0,0.180062129805349,0.452114453507145,0.476255494059295,0.12811372028485,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,0,0,0.702213187313235,0.51469581422943,0.568326998791185,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0,0,0,0.134206418760372,0,0,0,0.793351699990633,0,0.464473343720877,0.38660238396628,0.403367049246685,0.22237804384487,0,0.474529061544512,0,0,0,0.19496408711912,4.49409704327111,1.29682829924817,1.99141273254367,0,0,0,0,0,0.140271639780637,0,0,0,0.370191491765402,0,0.333690211432188,0.589676985339609,0.224862112384854,0.405720242777006,0.482354319504834,0.763877555344259,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,1.26235463602186,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0.322928853391811,0.0603129249281559,0.119372344003136,0,0.291480836629851,0,0.854354403989263,0.206386867963223,0.185194527369712,0.376736914009382,0.136694227721025,0.686334519619568,0.679913719975421,0.419854356970974,0.276399947608848,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0,0,0,0,0.518459893167171,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0.316011120628178,0.405450430580328,0.205421914329655,0.25984164595559,0.179026695667481,0,0.120195449519969,0,0,0.15241361331,0,0,0,0.350630706544707,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0,0,0.320919209591815,0,0,0,0,0.128050304809739,0.114870937911227,0,0.115884325944855,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0.499621155875892,0.233931608445408,0.214871054048298,0,0.220591419119515,0.231867835620421 | |phase1_expression=0.320297694209588,0.348975407639361,0.454999239389536,0.90739263392049,2.50447864973174,1.6787927191189,1.63528848416868,1.42035655785734,7.32101355188667,7.95819389494778,0,0.159544317990673,0.171200729931206,0.874204024189974,0.666219523631325,0.607425802169478,2.79824751251259,0,0,0.42438965179803,0,0.397163804803541,0,2.07990149631429,0.91763712426868,0,0,1.07735616342945,0.190023419456374,0.252030129759931,1.10865255327652,0,0,0,3.75507105676657,1.66234645358492,3.06254034393554,0.418531630736908,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0.279972843250725,0,0.335565212115473,1.45072428402269,1.34437519656986,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0.135005938331691,0.210324961351382,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0.186399445825301,0.151452386666368,0.453429360640713,1.44932244350839,0,0,0,0,0,0.280888840263504,0,0,0,0.845060518660083,0,0,0,0,0.506719730950197,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0.662524555381181,0,0,0,0,1.78819938646014,1.1981512450592,0.599902730993408,0.889491589511453,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0.260240885925407,0,0.180062129805349,0.452114453507145,0.476255494059295,0.12811372028485,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,0,0,0.702213187313235,0.51469581422943,0.568326998791185,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0,0,0,0.134206418760372,0,0,0,0.793351699990633,0,0.464473343720877,0.38660238396628,0.403367049246685,0.22237804384487,0,0.474529061544512,0,0,0,0.19496408711912,4.49409704327111,1.29682829924817,1.99141273254367,0,0,0,0,0,0.140271639780637,0,0,0,0.370191491765402,0,0.333690211432188,0.589676985339609,0.224862112384854,0.405720242777006,0.482354319504834,0.763877555344259,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,1.26235463602186,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0.322928853391811,0.0603129249281559,0.119372344003136,0,0.291480836629851,0,0.854354403989263,0.206386867963223,0.185194527369712,0.376736914009382,0.136694227721025,0.686334519619568,0.679913719975421,0.419854356970974,0.276399947608848,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0,0,0,0,0.518459893167171,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0.316011120628178,0.405450430580328,0.205421914329655,0.25984164595559,0.179026695667481,0,0.120195449519969,0,0,0.15241361331,0,0,0,0.350630706544707,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0,0,0.320919209591815,0,0,0,0,0.128050304809739,0.114870937911227,0,0.115884325944855,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0.499621155875892,0.233931608445408,0.214871054048298,0,0.220591419119515,0.231867835620421 | ||
|short_description=p3@Frat2 | |short_description=p3@Frat2 | ||
}} | }} |
Latest revision as of 18:48, 25 September 2015
Short description: | p3@Frat2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Frat2_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | -158bp_to_ENSMUST00000059231, NM_177603, uc008hmj.2_5end |
EntrezGene: | Frat2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.22e-16 | 9 |
epithelial cell of alimentary canal | 2.22e-16 | 9 |
intestinal crypt stem cell | 1.99e-13 | 3 |
mature alpha-beta T cell | 2.09e-11 | 9 |
alpha-beta T cell | 2.09e-11 | 9 |
immature T cell | 2.09e-11 | 9 |
mature T cell | 2.09e-11 | 9 |
immature alpha-beta T cell | 2.09e-11 | 9 |
endo-epithelial cell | 1.27e-09 | 15 |
epithelial cell | 1.87e-09 | 25 |
endodermal cell | 1.95e-09 | 20 |
T cell | 2.71e-09 | 11 |
pro-T cell | 2.71e-09 | 11 |
CD4-positive, alpha-beta T cell | 1.23e-08 | 8 |
lymphoid lineage restricted progenitor cell | 1.68e-08 | 12 |
lymphocyte | 7.91e-08 | 13 |
common lymphoid progenitor | 7.91e-08 | 13 |
brush border epithelial cell | 9.79e-07 | 6 |
gut absorptive cell | 9.79e-07 | 6 |
enterocyte | 9.79e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.21e-16 | 15 |
epithelium of mucosa | 2.22e-16 | 9 |
gastrointestinal system epithelium | 2.22e-16 | 9 |
intestinal epithelium | 2.22e-16 | 9 |
intestinal mucosa | 7.91e-15 | 13 |
wall of intestine | 7.91e-15 | 13 |
gastrointestinal system mucosa | 7.91e-15 | 13 |
intestine | 2.45e-14 | 31 |
simple columnar epithelium | 2.60e-13 | 11 |
organ component layer | 5.37e-10 | 24 |
gastrointestinal system | 7.90e-09 | 47 |