FFCP PHASE1:Mm9::chr3:87329494..87329565,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr3:87329494..87329565,+ to FFCP PHASE1:Mm9::chr3:87329494..87329565,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=27049 | |EntrezGene=27049 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=993 | |||
|TSSclassifier=NA | |||
|UniProt=E9QN48,D3YVU8,G5E907,Q8R4Z4,Q3U1H6 | |UniProt=E9QN48,D3YVU8,G5E907,Q8R4Z4,Q3U1H6 | ||
|association_with_transcript=0bp_to_ENSMUST00000061033,ENSMUST00000117293,ENSMUST00000136680,ENSMUST00000152010,ENSMUST00000170036,NM_001083318,NM_012051,uc008psg.1,uc008psh.1,uc008psi.1,uc008psj.1_5end | |||
|cluster_id=chr3:87329494..87329565,+ | |||
|description=CAGE_peak_1_at_Etv3_5end | |||
|id=chr3:87329494..87329565,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000065!1.45e-07!41;UBERON:0002193!1.45e-07!48;UBERON:0001004!2.69e-07!42;UBERON:0006562!3.77e-07!24;UBERON:0001557!3.77e-07!24;UBERON:0001042!3.77e-07!24;UBERON:0008814!3.77e-07!24;UBERON:0009145!3.77e-07!24;UBERON:0002370!8.41e-07!23;UBERON:0000974!8.41e-07!23;UBERON:0004807!8.41e-07!23;UBERON:0005058!8.41e-07!23;UBERON:0003351!8.41e-07!23;UBERON:0009113!8.41e-07!23;UBERON:0003295!8.41e-07!23;UBERON:0009722!8.41e-07!23;UBERON:0005562!8.41e-07!23;UBERON:0007690!8.41e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,1.34e-08,116;UBERON:0001555,1.34e-08,116;UBERON:0007026,1.34e-08,116;UBERON:0004119,2.09e-08,118;UBERON:0000925,2.09e-08,118;UBERON:0006595,2.09e-08,118;UBERON:0004921,5.64e-08,114;UBERON:0000065,1.45e-07,41;UBERON:0002193,1.45e-07,48;UBERON:0002405,1.45e-07,48;UBERON:0001004,2.69e-07,42;UBERON:0000160,3.13e-07,31;UBERON:0006562,3.77e-07,24;UBERON:0001557,3.77e-07,24;UBERON:0001042,3.77e-07,24;UBERON:0008814,3.77e-07,24;UBERON:0009145,3.77e-07,24;UBERON:0002370,8.41e-07,23;UBERON:0000974,8.41e-07,23;UBERON:0004807,8.41e-07,23;UBERON:0005058,8.41e-07,23;UBERON:0003351,8.41e-07,23;UBERON:0009113,8.41e-07,23;UBERON:0003295,8.41e-07,23;UBERON:0009722,8.41e-07,23;UBERON:0005562,8.41e-07,23;UBERON:0007690,8.41e-07,23 | |||
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| |phase1_expression=15.6945870162698,83.7540978334467,66.8848881902618,81.0604086302305,78.6406296015765,37.9407154520871,45.0872396349365,44.2892999404607,112.912555165637,92.9236169498314,24.8266053926982,14.8376215731326,37.8353613147965,43.5353604046607,11.9919514253639,10.9336644390506,6.29605690315332,35.1740314374435,39.0776135776356,31.8292238848523,14.627445905984,9.13476751048145,6.79119451761232,25.7587800697385,25.2350209173887,64.3139799808823,49.5376295582936,49.5583835177545,33.0640749854091,25.2030129759931,22.1730510655305,10.1604907753541,4.92051830067656,0,16.1756907060714,9.97407872150954,12.2501613757421,20.9265815368454,13.2827008569046,17.7998072951091,27.6468799374577,21.1744100337118,23.3044969454954,8.05739635043695,6.48812359804893,6.60768307782054,10.1710874765245,8.06693078607652,9.22681967484782,9.52706505463989,8.81914456239784,10.062679505548,52.5159556960715,68.1840413490664,64.1939156362106,9.26133969729409,6.87680255853016,15.4701627683233,8.6996078169627,3.70293685490423,5.07065122804943,6.09920157724438,5.33576877666684,31.9464399634897,28.6771245144423,38.3659262070894,24.8668091730276,19.9793518767208,9.7468235569969,8.6403800532282,9.25429829946081,9.99778445413313,7.28866185140325,7.34944795289724,10.6388472830242,7.35375029288017,15.4162233399144,15.7055425844781,14.5926206593431,9.10015385338338,10.8870295886867,7.8137005583514,12.8424179540635,14.6318278608237,18.9469827243245,8.83885756421003,6.26435395516053,8.57437450796383,12.4190957066422,10.2777321745228,35.6533321103064,18.0689014166091,12.9194553404473,14.5719861742211,11.695975514058,9.40856462904405,12.4995533917259,6.47635225796619,7.27400812888033,8.12681021373782,14.7885590765515,5.13305909657271,17.8363667794652,14.2213340630666,12.3399893376392,9.62767488805375,8.08839112023653,14.8439043634778,47.3856327074324,15.289540323677,8.32729568477452,4.26251669636998,11.0695438682908,7.23468674652588,10.347806227942,8.92232798440696,14.5845030963281,19.665512541108,15.0383793831479,10.0295446967394,9.49618529379692,12.6067565815158,31.6865994070808,13.7606974595427,19.6879904404648,39.3403865021231,19.529865294465,15.5974710058286,17.2815508819368,15.1288545798871,18.3000241127451,9.5497307605777,14.4274185759589,15.5986428971502,14.5451631191692,13.3037835715561,12.6280811174392,11.0722203842983,9.09801930361229,12.6265113531884,11.5807194236806,10.1156925950728,12.9644733459851,15.0704817835715,12.858898339601,15.5017601544668,13.6804517857204,9.57202471734358,12.287375597172,12.1027891307404,13.1963343122962,17.0972671293508,21.1315909411454,21.5916343243743,23.2533814140976,11.3449532086541,10.5331978096985,12.610047448621,10.5140494776369,13.0489236697366,9.61556845922494,12.064158117888,12.0739815148457,12.0026181365916,10.7986979021165,12.0917651270212,12.6088498657821,13.3112490298573,14.9749463421267,13.6258995185649,16.3758995282629,16.8129985539132,13.6121071480451,17.9836601138898,14.2997165023607,9.8788427884113,68.72710686063,23.5361004330554,11.5175655289026,9.75394021813842,10.9537342123779,12.3026950020239,12.8979265430025,13.1255682017666,26.0990983849481,15.317002789333,19.8554814952213,21.8852119245266,21.2510854959841,26.9645822596266,26.152704034838,29.4729084416463,12.1387456609972,9.25412952138803,10.1436962105772,12.4227309985642,10.6673867942194,14.3778430775153,11.5090497566148,10.4803205065518,11.6179058602617,10.6121560972748,13.6368208460088,7.17433954579204,8.45203678986773,5.17182858485164,6.49152388443209,7.95884627182976,9.93040821947537,8.34318798607351,10.5387897403773,6.86403532970204,5.75072826109418,14.5134969590716,10.9213185590096,10.8608917517258,11.6608318789243,15.4381926836277,21.8008764396594,10.8010104709176,11.8964432802679,13.7493519477902,14.3161051455986,19.7657383781343,19.2815349117671,25.9527751650872,17.8127712839996,23.4752571027701,21.8453033060757,23.2685906896348,19.858772914578,21.1187625529007,36.1899081454253,39.1612092349471,9.34352118736169,16.5562047782839,13.3256989689867,14.6514608240254,10.3279015587306,11.8661335786055,5.67914794949262,8.58965237452605,6.89354872744957,10.7535959078648,9.80314165962534,11.0399847007645,4.04810701674894,6.72188473196017,12.6492088942888,15.1021018718249,11.3552068166615,11.9303954457061,12.7051828295789,15.3422214364458,7.96470830039777,10.1967867185092,9.97667737983678,10.7504895460862,7.97315110778086,12.912276213645,16.5394107627662,10.1789444253702,10.6949213515416,16.1178746547266,13.7044191147498,8.25084345985495,14.6389030474129,12.0640933000978,11.2542054890996,10.502514716548,10.995094485821,10.8804978737263,10.0374902567294,9.13394847343798,7.97883807416615,19.0648863777438,11.688005096913,40.7269044765456,27.4489525383039,40.650911401577,43.9290225931542,41.6917885352456,18.0718118710507,17.2445530869774,16.232733675796,14.2406938894624,9.63011542322501,7.15800136617826,10.5254555345189,11.8964650067392,59.3224720678555,56.2604838341105,54.450789678943,13.3653886522116,10.9135917785492,12.6058069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| ||
|short_description=p1@Etv3 | |||
}} | }} |
Latest revision as of 19:03, 25 September 2015
Short description: | p1@Etv3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Etv3_5end |
Coexpression cluster: | MCL_coexpression_mm9:993 |
Association with transcript: | 0bp_to_ENSMUST00000061033, ENSMUST00000117293, ENSMUST00000136680, ENSMUST00000152010, ENSMUST00000170036, NM_001083318, NM_012051, uc008psg.1, uc008psh.1, uc008psi.1, uc008psj.1_5end |
EntrezGene: | Etv3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
digestive system | 1.34e-08 | 116 |
digestive tract | 1.34e-08 | 116 |
primitive gut | 1.34e-08 | 116 |
endoderm-derived structure | 2.09e-08 | 118 |
endoderm | 2.09e-08 | 118 |
presumptive endoderm | 2.09e-08 | 118 |
subdivision of digestive tract | 5.64e-08 | 114 |
respiratory tract | 1.45e-07 | 41 |
hemolymphoid system | 1.45e-07 | 48 |
immune system | 1.45e-07 | 48 |
respiratory system | 2.69e-07 | 42 |
intestine | 3.13e-07 | 31 |
pharynx | 3.77e-07 | 24 |
upper respiratory tract | 3.77e-07 | 24 |
chordate pharynx | 3.77e-07 | 24 |
pharyngeal arch system | 3.77e-07 | 24 |
pharyngeal region of foregut | 3.77e-07 | 24 |
thymus | 8.41e-07 | 23 |
neck | 8.41e-07 | 23 |
respiratory system epithelium | 8.41e-07 | 23 |
hemolymphoid system gland | 8.41e-07 | 23 |
pharyngeal epithelium | 8.41e-07 | 23 |
thymic region | 8.41e-07 | 23 |
pharyngeal gland | 8.41e-07 | 23 |
entire pharyngeal arch endoderm | 8.41e-07 | 23 |
thymus primordium | 8.41e-07 | 23 |
early pharyngeal endoderm | 8.41e-07 | 23 |