FFCP PHASE1:Mm9::chr11:94937880..94937903,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16400 | |EntrezGene=16400 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=Q62470 | |UniProt=Q62470 | ||
|association_with_transcript=124bp_to_ENSMUST00000001548,ENSMUST00000073698,NM_013565,uc007kzw.1_5end | |association_with_transcript=124bp_to_ENSMUST00000001548,ENSMUST00000073698,NM_013565,uc007kzw.1_5end | ||
|cluster_id=chr11:94937880..94937903,- | |||
|description=CAGE_peak_3_at_Itga3_5end | |description=CAGE_peak_3_at_Itga3_5end | ||
|id=chr11:94937880..94937903,- | |id=chr11:94937880..94937903,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,5.51e-09,6;CL:0000677,5.51e-09,6;CL:0000584,5.51e-09,6;CL:0000075,1.68e-07,7;CL:0000066,2.12e-07,25;CL:0002076,2.96e-07,15;CL:0002563,6.51e-07,9;CL:0002251,6.51e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.04e-13!59;UBERON:0000160!1.00e-11!43;UBERON:0000344!7.76e-10!15;UBERON:0001242!1.66e-08!13;UBERON:0000060!1.66e-08!13;UBERON:0001262!1.66e-08!13;UBERON:0004786!1.66e-08!13;UBERON:0004923!1.11e-07!24;UBERON:0004119!3.43e-07!130;UBERON:0000925!3.43e-07!130;UBERON:0006595!3.43e-07!130 | |ontology_enrichment_uberon=UBERON:0005409!3.04e-13!59;UBERON:0000160!1.00e-11!43;UBERON:0000344!7.76e-10!15;UBERON:0001242!1.66e-08!13;UBERON:0000060!1.66e-08!13;UBERON:0001262!1.66e-08!13;UBERON:0004786!1.66e-08!13;UBERON:0004923!1.11e-07!24;UBERON:0004119!3.43e-07!130;UBERON:0000925!3.43e-07!130;UBERON:0006595!3.43e-07!130 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.05e-25,31;UBERON:0005409,1.30e-24,47;UBERON:0004119,9.64e-18,118;UBERON:0000925,9.64e-18,118;UBERON:0006595,9.64e-18,118;UBERON:0001007,1.61e-16,116;UBERON:0001555,1.61e-16,116;UBERON:0007026,1.61e-16,116;UBERON:0004921,7.00e-15,114;UBERON:0000344,5.13e-14,15;UBERON:0001242,1.22e-11,13;UBERON:0001262,1.22e-11,13;UBERON:0004786,1.22e-11,13;UBERON:0004923,6.15e-11,24;UBERON:0005178,1.09e-08,17;UBERON:0005181,1.09e-08,17;UBERON:0002224,1.09e-08,17;UBERON:0000915,1.09e-08,17;UBERON:0008947,1.09e-08,17;UBERON:0003258,1.09e-08,17;UBERON:0003350,6.51e-07,9;UBERON:0004808,6.51e-07,9;UBERON:0001277,6.51e-07,9 | |||
|phase1_expression=0.160148847104794,51.6483603306254,53.6899102479653,39.6228116811947,60.608383323508,13.2624624810393,10.9797941079897,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,1.10556277196391,0,0,19.8390604263824,24.7762023552544,33.3054539186712,31.4456257196125,19.8233534071018,24.3229976904159,31.2517360902314,24.6120866827388,0,0,0,0.577703239502549,0.831173226792462,1.22501613757421,0,0,0,0,0,0,0,0.304130793658544,0,0,3.92445281484804,12.7417985985994,11.0825042472342,1.39986421625363,7.18762821824858,0,0,0,0.257259436035947,0.573066879877513,2.06268836910977,0,0,0,1.35537812827653,0,0,0,0,0,1.15265491596466,0,0,0,0.285650984403804,0.662605622854841,0,0,0,0,0.383062014255563,0.153606533256243,0,0,0,0,0,0,0.294628585473668,0.284743361598206,0.186399445825301,0,0.0755715601067855,1.44932244350839,0,0,0,0,0,1.26399978118577,0.681721290312231,0.259786004602869,0,0.14084341977668,0,0,0,6.061749148314,7.60079596425296,7.07734223020697,3.08296475241462,0,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0.705532242814229,0.251333182659351,5.6854842578906,1.01219549843938,0,0,0,0,3.72783522436244,0,0.628340120440365,22.9911349687732,0,0,0,0.149790639404823,0,0,0,0,0,0.324482526135515,0.712875546952214,0.870848794270651,1.76905930903572,0.841767423545896,0,0,0,0.150704817835715,0.204109497453984,0.384341160854549,0.468508622798644,0.258703370739016,0.215567992932842,0,0,0.219195732427575,0,0,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0.925602677324269,0,0,0.467061369468678,0.493679549740441,0.164167464079095,0.243206428637567,0.584799949701329,0.219550115291051,0.402619256281115,0,0.102904612379284,40.971929089991,16.1314845664762,0.426576501070468,0.696710015581316,1.28867461322093,4.23535401709019,3.33567065767305,3.80451252225118,18.506633400236,11.6936257854048,9.80207314321051,7.16243299348143,6.04388670069272,20.6728463990471,11.8875927431082,17.922714592893,0.189667900953082,0.685491075658373,1.1270773567308,0.407302655690628,0.775809948670503,0.98190147846446,0.69560190836683,1.32849133181642,0.941992367048249,0.616985819609003,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0.25462585178142,0,0.324270453550071,0.549122826376163,0,0,0,0.252578877947112,0,0.964887042726734,6.09685527549795,0,0.488894929326078,0.339490171550376,0.938760993154008,2.1775813467436,3.80869825417622,5.85400943573396,1.41871629695572,2.43611158613652,4.14582398509466,2.78567635016755,2.41758974612254,4.62876987460837,0,0,0.983528546038072,0.827810238914197,0.321101179975584,0.234423373184406,0,0.252470927204373,0.315508219416257,0.390438744296638,0.215423397732799,0.477937595905104,0,0,0,0,0.395287777946524,0,0.141940085208269,0.712262414669021,1.95464351224291,0.659880491890142,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0,3.35956781118687,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0,0.388076051348264,0.214337035031592,0.177340233642274,0.356737635204141,0.164549020602121,0.608929898229199,1.40803024838226,2.54198485036584,0.882113592219848,0.32977250588296,0.645857706783622,0.301564624640779,1.79058516004705,0.984845398470368,18.3632927076806,0.18542530201051,0,0.619160603889667,0.185194527369712,0.188368457004691,0.136694227721025,0,0.509935289981566,0.69975726161829,0.138199973804424,1.90934123603023,0.632671987162271,1.21991680276109,0.86404272657441,1.25452977608681,3.05707589244649,1.34864346384821,2.47960367176008,4.71160695571253,8.42497326396654,0,0,0,0,0,0,0,0.234714477291508,0.13020438484395,0.104859344425711,0.241584120826006,0,0,0,0.102710957164827,0.129920822977795,0.537080087002444,0,0,0,0,0.15241361331,0,0.0974578807397524,0,0.116876902181569,0.453460767230423,0.887943813496259,0.62799699626633,0.503653849092235,3.09103350451505,2.064507229963,0.183151624267265,1.92931541171159,3.00943262421218,0,0,0.572895513439397,0,0,0.755393897389701,0.675022500231806,0,0,0.51776031175182,0,0.399024873401031,0,0.486213434136588,0.209613162627982,0.183843508450014,0.888986911206461,1.03017528619447,0.64183841918363,0.758091635291392,0,0.188626341386076,0.561849044819294,0.192075457214608,0.459483751644906,0.952587382566147,0.347652977834566,0.578727661391115,0.824171801606613,0.294397840268795,0.685738504770831,0.70990322463735,0.238436189947321,0.581385666529314,0.564656282491984,0.338458431566706,0.548783918618318,0.263069711437843,0.543216455383447,1.68342681497322,0.474540072496697,0.0985044823755635,0.818462086339379,0.77468420592983,0.771626443924566,0,0.233931608445408,1.28922632428979,0.382576664137687,0.220591419119515,0 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|phase1_expression=0.160148847104794,51.6483603306254,53.6899102479653,39.6228116811947,60.608383323508,13.2624624810393,10.9797941079897,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,1.10556277196391,0,0,19.8390604263824,24.7762023552544,33.3054539186712,31.4456257196125,19.8233534071018,24.3229976904159,31.2517360902314,24.6120866827388,0,0,0,0.577703239502549,0.831173226792462,1.22501613757421,0,0,0,0,0,0,0,0.304130793658544,0,0,3.92445281484804,12.7417985985994,11.0825042472342,1.39986421625363,7.18762821824858,0,0,0,0.257259436035947,0.573066879877513,2.06268836910977,0,0,0,1.35537812827653,0,0,0,0,0,1.15265491596466,0,0,0,0.285650984403804,0.662605622854841,0,0,0,0,0.383062014255563,0.153606533256243,0,0,0,0,0,0,0.294628585473668,0.284743361598206,0.186399445825301,0,0.0755715601067855,1.44932244350839,0,0,0,0,0,1.26399978118577,0.681721290312231,0.259786004602869,0,0.14084341977668,0,0,0,6.061749148314,7.60079596425296,7.07734223020697,3.08296475241462,0,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0.705532242814229,0.251333182659351,5.6854842578906,1.01219549843938,0,0,0,0,3.72783522436244,0,0.628340120440365,22.9911349687732,0,0,0,0.149790639404823,0,0,0,0,0,0.324482526135515,0.712875546952214,0.870848794270651,1.76905930903572,0.841767423545896,0,0,0,0.150704817835715,0.204109497453984,0.384341160854549,0.468508622798644,0.258703370739016,0.215567992932842,0,0,0.219195732427575,0,0,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0.925602677324269,0,0,0.467061369468678,0.493679549740441,0.164167464079095,0.243206428637567,0.584799949701329,0.219550115291051,0.402619256281115,0,0.102904612379284,40.971929089991,16.1314845664762,0.426576501070468,0.696710015581316,1.28867461322093,4.23535401709019,3.33567065767305,3.80451252225118,18.506633400236,11.6936257854048,9.80207314321051,7.16243299348143,6.04388670069272,20.6728463990471,11.8875927431082,17.922714592893,0.189667900953082,0.685491075658373,1.1270773567308,0.407302655690628,0.775809948670503,0.98190147846446,0.69560190836683,1.32849133181642,0.941992367048249,0.616985819609003,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0.25462585178142,0,0.324270453550071,0.549122826376163,0,0,0,0.252578877947112,0,0.964887042726734,6.09685527549795,0,0.488894929326078,0.339490171550376,0.938760993154008,2.1775813467436,3.80869825417622,5.85400943573396,1.41871629695572,2.43611158613652,4.14582398509466,2.78567635016755,2.41758974612254,4.62876987460837,0,0,0.983528546038072,0.827810238914197,0.321101179975584,0.234423373184406,0,0.252470927204373,0.315508219416257,0.390438744296638,0.215423397732799,0.477937595905104,0,0,0,0,0.395287777946524,0,0.141940085208269,0.712262414669021,1.95464351224291,0.659880491890142,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0,3.35956781118687,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0,0.388076051348264,0.214337035031592,0.177340233642274,0.356737635204141,0.164549020602121,0.608929898229199,1.40803024838226,2.54198485036584,0.882113592219848,0.32977250588296,0.645857706783622,0.301564624640779,1.79058516004705,0.984845398470368,18.3632927076806,0.18542530201051,0,0.619160603889667,0.185194527369712,0.188368457004691,0.136694227721025,0,0.509935289981566,0.69975726161829,0.138199973804424,1.90934123603023,0.632671987162271,1.21991680276109,0.86404272657441,1.25452977608681,3.05707589244649,1.34864346384821,2.47960367176008,4.71160695571253,8.42497326396654,0,0,0,0,0,0,0,0.234714477291508,0.13020438484395,0.104859344425711,0.241584120826006,0,0,0,0.102710957164827,0.129920822977795,0.537080087002444,0,0,0,0,0.15241361331,0,0.0974578807397524,0,0.116876902181569,0.453460767230423,0.887943813496259,0.62799699626633,0.503653849092235,3.09103350451505,2.064507229963,0.183151624267265,1.92931541171159,3.00943262421218,0,0,0.572895513439397,0,0,0.755393897389701,0.675022500231806,0,0,0.51776031175182,0,0.399024873401031,0,0.486213434136588,0.209613162627982,0.183843508450014,0.888986911206461,1.03017528619447,0.64183841918363,0.758091635291392,0,0.188626341386076,0.561849044819294,0.192075457214608,0.459483751644906,0.952587382566147,0.347652977834566,0.578727661391115,0.824171801606613,0.294397840268795,0.685738504770831,0.70990322463735,0.238436189947321,0.581385666529314,0.564656282491984,0.338458431566706,0.548783918618318,0.263069711437843,0.543216455383447,1.68342681497322,0.474540072496697,0.0985044823755635,0.818462086339379,0.77468420592983,0.771626443924566,0,0.233931608445408,1.28922632428979,0.382576664137687,0.220591419119515,0 | ||
|short_description=p3@Itga3 | |short_description=p3@Itga3 | ||
}} | }} |
Latest revision as of 00:38, 26 September 2015
Short description: | p3@Itga3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Itga3_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 124bp_to_ENSMUST00000001548, ENSMUST00000073698, NM_013565, uc007kzw.1_5end |
EntrezGene: | Itga3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 5.51e-09 | 6 |
gut absorptive cell | 5.51e-09 | 6 |
enterocyte | 5.51e-09 | 6 |
columnar/cuboidal epithelial cell | 1.68e-07 | 7 |
epithelial cell | 2.12e-07 | 25 |
endo-epithelial cell | 2.96e-07 | 15 |
intestinal epithelial cell | 6.51e-07 | 9 |
epithelial cell of alimentary canal | 6.51e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.05e-25 | 31 |
gastrointestinal system | 1.30e-24 | 47 |
endoderm-derived structure | 9.64e-18 | 118 |
endoderm | 9.64e-18 | 118 |
presumptive endoderm | 9.64e-18 | 118 |
digestive system | 1.61e-16 | 116 |
digestive tract | 1.61e-16 | 116 |
primitive gut | 1.61e-16 | 116 |
subdivision of digestive tract | 7.00e-15 | 114 |
mucosa | 5.13e-14 | 15 |
intestinal mucosa | 1.22e-11 | 13 |
wall of intestine | 1.22e-11 | 13 |
gastrointestinal system mucosa | 1.22e-11 | 13 |
organ component layer | 6.15e-11 | 24 |
thoracic cavity element | 1.09e-08 | 17 |
thoracic segment organ | 1.09e-08 | 17 |
thoracic cavity | 1.09e-08 | 17 |
thoracic segment of trunk | 1.09e-08 | 17 |
respiratory primordium | 1.09e-08 | 17 |
endoderm of foregut | 1.09e-08 | 17 |
epithelium of mucosa | 6.51e-07 | 9 |
gastrointestinal system epithelium | 6.51e-07 | 9 |
intestinal epithelium | 6.51e-07 | 9 |