FFCP PHASE2:Mm9::chr17:25707623..25707639,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:20681 |HGNC= |MCL_coexpression_id=2197 |TSSclassifier=NA |UniProt=uniprot:Q04886,uniprot:G3UWS3,uniprot:Q543C3,unip...") |
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|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=20681 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2197 | |MCL_coexpression_id=2197 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=Q04886,G3UWS3,Q543C3,Q80V52 | ||
|association_with_transcript=0bp_to_ENSMUST00000025003,ENSMUST00000173447,NM_011447,uc008bay.1,uc008baz.1,uc008bba.1_5end | |association_with_transcript=0bp_to_ENSMUST00000025003,ENSMUST00000173447,NM_011447,uc008bay.1,uc008baz.1,uc008bba.1_5end | ||
|cluster_id=chr17:25707623..25707639,- | |cluster_id=chr17:25707623..25707639,- | ||
Latest revision as of 02:24, 26 September 2015
| Short description: | p1@Sox8 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Sox8_5end |
| Coexpression cluster: | MCL_coexpression_mm9:2197 |
| Association with transcript: | 0bp_to_ENSMUST00000025003, ENSMUST00000173447, NM_011447, uc008bay.1, uc008baz.1, uc008bba.1_5end |
| EntrezGene: | Sox8 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p1@Sox8 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neural cell | 4.01e-15 | 43 |
| ectodermal cell | 4.22e-15 | 44 |
| neurectodermal cell | 4.22e-15 | 44 |
| neuron | 8.37e-14 | 33 |
| neuronal stem cell | 8.37e-14 | 33 |
| neuroblast | 8.37e-14 | 33 |
| electrically signaling cell | 8.37e-14 | 33 |
| CNS neuron (sensu Vertebrata) | 2.57e-10 | 23 |
| neuroblast (sensu Vertebrata) | 2.57e-10 | 23 |
| electrically responsive cell | 7.27e-09 | 39 |
Showing 1 to 10 of 11 entries
| Ontology term | p-value | n |
|---|---|---|
| central nervous system | 2.95e-28 | 73 |
| nervous system | 2.36e-27 | 75 |
| ectoderm-derived structure | 3.37e-27 | 95 |
| ectoderm | 3.37e-27 | 95 |
| presumptive ectoderm | 3.37e-27 | 95 |
| neurectoderm | 6.49e-23 | 64 |
| neural plate | 6.49e-23 | 64 |
| presumptive neural plate | 6.49e-23 | 64 |
| ecto-epithelium | 4.29e-21 | 73 |
| regional part of nervous system | 1.23e-19 | 54 |
Showing 1 to 10 of 33 entries
