FFCP PHASE1:Mm9::chr19:6306626..6306638,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=240505 | |EntrezGene=240505 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1331 | |||
|TSSclassifier=NA | |||
|UniProt=Q80UW5 | |UniProt=Q80UW5 | ||
|association_with_transcript=169bp_to_NM_001033342,uc008gia.2_5end | |association_with_transcript=169bp_to_NM_001033342,uc008gia.2_5end | ||
|cluster_id=chr19:6306626..6306638,+ | |||
|description=CAGE_peak_4_at_Cdc42bpg_5end | |description=CAGE_peak_4_at_Cdc42bpg_5end | ||
|id=chr19:6306626..6306638,+ | |id=chr19:6306626..6306638,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,5.57e-10,15;CL:0002563,1.66e-09,9;CL:0002251,1.66e-09,9;CL:0000239,2.26e-09,6;CL:0000677,2.26e-09,6;CL:0000584,2.26e-09,6;CL:0000066,1.06e-08,25;CL:0000075,7.49e-08,7;CL:0000223,9.68e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.39e-16!43;UBERON:0004119!1.08e-14!130;UBERON:0000925!1.08e-14!130;UBERON:0006595!1.08e-14!130;UBERON:0005409!1.17e-14!59;UBERON:0001007!2.99e-14!128;UBERON:0001555!2.99e-14!128;UBERON:0007026!2.99e-14!128;UBERON:0004921!3.12e-13!126;UBERON:0004185!3.12e-13!126;UBERON:0000344!9.35e-10!15;UBERON:0001242!1.50e-08!13;UBERON:0000060!1.50e-08!13;UBERON:0001262!1.50e-08!13;UBERON:0004786!1.50e-08!13;UBERON:0005178!4.69e-07!17;UBERON:0005181!4.69e-07!17;UBERON:0002224!4.69e-07!17;UBERON:0000915!4.69e-07!17;UBERON:0008947!4.69e-07!17;UBERON:0003258!4.69e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.17e-18,31;UBERON:0005409,1.18e-15,47;UBERON:0000344,1.20e-15,15;UBERON:0004119,2.47e-15,118;UBERON:0000925,2.47e-15,118;UBERON:0006595,2.47e-15,118;UBERON:0001007,5.15e-15,116;UBERON:0001555,5.15e-15,116;UBERON:0007026,5.15e-15,116;UBERON:0004921,1.60e-13,114;UBERON:0001242,2.17e-13,13;UBERON:0001262,2.17e-13,13;UBERON:0004786,2.17e-13,13;UBERON:0004923,6.51e-11,24;UBERON:0003350,1.66e-09,9;UBERON:0004808,1.66e-09,9;UBERON:0001277,1.66e-09,9;UBERON:0005178,2.54e-09,17;UBERON:0005181,2.54e-09,17;UBERON:0002224,2.54e-09,17;UBERON:0000915,2.54e-09,17;UBERON:0008947,2.54e-09,17;UBERON:0003258,2.54e-09,17;UBERON:0000485,1.98e-07,11;UBERON:0007023,5.25e-07,51 | |||
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|phase1_expression=0.160148847104794,9.07336059862339,5.45999087267443,7.56160528267075,12.0214975187123,2.51818907867835,2.10251376535973,0,0,0,0,0,0,0.0874204024189974,0,0,0,0.157731082679119,0,0,1.44573593256819,0,0,1.91990907352088,2.98232065387321,5.7423196411502,5.59990595006797,5.17130958446134,1.33016393619462,2.01624103807945,3.54768817048488,0.635030673459631,0,0,1.1554064790051,0.498703936075477,1.63335485009895,0,0.7813353445238,0,0,0.683045484958446,0,0.125896817975577,0,0,0.782391344348039,0,0.439372365468944,0,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0.677689064138264,0,0,0.988866362566974,0,0.299600110518405,0.768436610643109,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0.539703191637817,0,0.448026887097336,0.280888840263504,0,0,0,0.281686839553361,0,0,0,3.89683873820185,2.53359865475099,5.56076889516262,1.02765491747154,0,0.148442139064825,0,0,0,0.150722640552623,0,0,2.22475470960936,0,0,0,0,0,5.59175283654366,2.92780797011547,2.93225389538837,1.02182822083437,0,0,0.127070227073065,0,0,0,0,0,0,0,0.101839363850316,0.248813941220186,1.0108910337347,1.47309299120532,0.130120442962704,0,0,0,0.136072998302656,0.12811372028485,0.0937017245597288,0,0,0.189106080167819,0.175951124163949,0,0,0,0.205782136407943,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0,0,0,0,0,0,1.32167513193519,1.32225283331772,0.213288250535234,0.232236671860439,0.257734922644187,0.80673409849337,1.11189021922435,1.33157938278791,1.42358718463353,0.823494773620054,3.77002813200404,1.1937388322469,1.9496408711912,1.79763881730844,0.864552199498777,2.38969527905241,0.189667900953082,0,1.1270773567308,0.203651327845314,0,0.280543279561274,0.316182685621286,0.885660887877613,0.470996183524124,0.740382983530803,0,0,0,0.224862112384854,0,0.241177159752417,1.01850340712568,0.575392274901621,0,0.274561413188081,5.75072826109418,0.372140947668503,0.624075346229121,0,0.538192240565737,0,2.58654466233247,0.189491411770485,0,0.169745085775188,0.469380496577004,2.51259386162724,1.42826184531608,2.92700471786698,0.788175720530955,1.10732344824387,1.59454768657487,2.45794972073607,2.41758974612254,2.60368305446721,0,0,0.983528546038072,1.10374698521893,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0.584511715822624,0.790575555893047,0,0.283880170416537,0,0,0.659880491890142,0,0.728341908464944,0.302323556964751,0.565815239267694,0.885905678642318,0.922305443831782,1.55056975900933,0.363533729477506,0.712994756769443,0.316036757935816,1.05418608574999,3.09406629744561,0.680879211507576,0,0.129358683782755,0,0,0.356737635204141,0.329098041204242,0,0.23467170806371,1.0591603543191,0.661585194164886,3.2977250588296,0.807322133479528,1.02531972377865,1.07435109602823,0.820704498725306,1.7488850197791,0,0,0,0,0,0,0,0.169978429993855,0.139951452323658,0,1.90934123603023,0.316335993581135,0,0.540026704109006,0.627264888043406,1.09181281873089,0.944050424693745,1.07449492442937,1.83229159388821,1.68499465279331,1.24267862617385,0.56369293868419,0.149516546043979,0,0,0.129159823477731,0,0,0,0.314578033277133,0.483168241652012,0.288030006257865,0,0,0.205421914329655,0.25984164595559,0,0,0,0,0.302899349844443,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0.116876902181569,1.13365191807606,1.77588762699252,1.34570784914214,2.51826924546118,4.25017106870819,0.187682475451182,0.36630324853453,1.71494703263253,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0.505394423527595,0.50695859978048,0.565879024158229,0.187283014939765,0.192075457214608,0.287177344778066,0.952587382566147,0.347652977834566,0.578727661391115,0.412085900803307,0.441596760403192,0,0.354951612318675,0.238436189947321,0.436039249896986,0.282328141245992,0.507687647350059,0.182927972872773,0.526139422875686,0.407412341537585,2.24456908663095,0.355905054372522,0.394017929502254,0,0,0.578719832943424,0.249810577937946,0.935726433781634,1.07435527024149,0.382576664137687,0,0 | ||
|short_description=p4@Cdc42bpg | |short_description=p4@Cdc42bpg | ||
}} | }} |
Latest revision as of 03:00, 26 September 2015
Short description: | p4@Cdc42bpg |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Cdc42bpg_5end |
Coexpression cluster: | MCL_coexpression_mm9:1331 |
Association with transcript: | 169bp_to_NM_001033342, uc008gia.2_5end |
EntrezGene: | Cdc42bpg |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 5.57e-10 | 15 |
intestinal epithelial cell | 1.66e-09 | 9 |
epithelial cell of alimentary canal | 1.66e-09 | 9 |
brush border epithelial cell | 2.26e-09 | 6 |
gut absorptive cell | 2.26e-09 | 6 |
enterocyte | 2.26e-09 | 6 |
epithelial cell | 1.06e-08 | 25 |
columnar/cuboidal epithelial cell | 7.49e-08 | 7 |
endodermal cell | 9.68e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.17e-18 | 31 |
gastrointestinal system | 1.18e-15 | 47 |
mucosa | 1.20e-15 | 15 |
endoderm-derived structure | 2.47e-15 | 118 |
endoderm | 2.47e-15 | 118 |
presumptive endoderm | 2.47e-15 | 118 |
digestive system | 5.15e-15 | 116 |
digestive tract | 5.15e-15 | 116 |
primitive gut | 5.15e-15 | 116 |
subdivision of digestive tract | 1.60e-13 | 114 |
intestinal mucosa | 2.17e-13 | 13 |
wall of intestine | 2.17e-13 | 13 |
gastrointestinal system mucosa | 2.17e-13 | 13 |
organ component layer | 6.51e-11 | 24 |
epithelium of mucosa | 1.66e-09 | 9 |
gastrointestinal system epithelium | 1.66e-09 | 9 |
intestinal epithelium | 1.66e-09 | 9 |
thoracic cavity element | 2.54e-09 | 17 |
thoracic segment organ | 2.54e-09 | 17 |
thoracic cavity | 2.54e-09 | 17 |
thoracic segment of trunk | 2.54e-09 | 17 |
respiratory primordium | 2.54e-09 | 17 |
endoderm of foregut | 2.54e-09 | 17 |
simple columnar epithelium | 1.98e-07 | 11 |
adult organism | 5.25e-07 | 51 |