FFCP PHASE1:Mm9::chr14:56407573..56407586,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56532 | |EntrezGene=56532 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=167 | |||
|TSSclassifier=NA | |||
|UniProt=G3X8V8,E9PZP3,Q8K2Y2 | |UniProt=G3X8V8,E9PZP3,Q8K2Y2 | ||
|association_with_transcript=107bp_to_ENSMUST00000022830,ENSMUST00000168716,NM_001164107,NM_001164108,NM_019955,uc007uav.2,uc007uaw.2,uc011zlp.1_5end | |association_with_transcript=107bp_to_ENSMUST00000022830,ENSMUST00000168716,NM_001164107,NM_001164108,NM_019955,uc007uav.2,uc007uaw.2,uc011zlp.1_5end | ||
|cluster_id=chr14:56407573..56407586,- | |||
|description=CAGE_peak_5_at_Ripk3_5end | |description=CAGE_peak_5_at_Ripk3_5end | ||
|id=chr14:56407573..56407586,- | |id=chr14:56407573..56407586,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000049,2.01e-18,19;CL:0000557,6.54e-17,7;CL:0000988,5.56e-14,32;CL:0002032,5.56e-14,32;CL:0000037,5.56e-14,32;CL:0000837,5.56e-14,32;CL:0002320,4.91e-12,46;CL:0000134,4.91e-12,46;CL:0000219,3.87e-10,54;CL:0000034,5.48e-10,97;CL:0000763,1.46e-07,16 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.91e-12,46;UBERON:0002371,1.46e-07,16 | |||
|phase1_expression=0,0.697950815278722,0,0,0.500895729946347,0,0,0,0.563154888606667,0,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0.137114433605739,0,0.0850432901510698,0.496454756004426,1.56719873483361,0,0.45881856213434,0,0.430761996159075,0.215471232685889,0.190023419456374,0.252030129759931,0.443461021310609,0,0.61506478758457,0,0.288851619751275,0.498703936075477,0.408338712524738,0,0.7813353445238,0,0.588231488031014,0,0,0.377690453926732,0.405507724878058,0.734187008646726,0,0,0,0.194429899074283,0.839918529752175,0,0,0,0.336093799142464,0.257259436035947,0,0,0,0,0,0.677689064138264,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0.340860645156116,1.03914401841148,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0,0.258937883647172,0,0.346970653532272,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0.255457055208591,2.51611761462433,3.59941638596045,2.03312363316904,0.149790639404823,0,0.125654352112864,0,0,0,0,0.101839363850316,0.248813941220186,0,0,0,0,0,0,0.136072998302656,0,0,0.258703370739016,0.431135985865684,0.189106080167819,0.351902248327898,0.657587197282725,0.278047249225598,0,0,0,2.1066395619397,2.57347907114715,2.27330799516474,0,0,0.180062061461015,0.473489471170421,0.590292695242212,0,0,0,0,0.329119699826961,0.164167464079095,0.0810688095458557,0,0.219550115291051,0.268412837520744,0,0.102904612379284,0.330418782983798,0,0.639864751605702,0,0,0.201683524623343,0,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0.398282546508734,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0,0.196558995113203,0.224862112384854,0.405720242777006,0.482354319504834,0.25462585178142,0.575392274901621,0.324270453550071,0.274561413188081,0,0.372140947668503,0,0,0,0,0,0.189491411770485,0.488894929326078,0.509235257325564,0.234690248288502,0,0.238043640886014,0.195133647857799,0.315270288212382,0,0.159454768657487,0,0.172684981865896,0,0,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0.36012218806262,0.258717367565509,0.428674070063185,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0,0.322928853391811,0.0603129249281559,0,0,0.291480836629851,0,0.341741761595705,0.206386867963223,0.370389054739423,0.376736914009382,0,0.457556346413045,4.58941760983409,4.47844647435706,5.11339903076368,0,0.316335993581135,0.406638934253697,0,0,0.655087691238533,0,0,0,0,0,0,0.299033092087958,0.165458490457098,0,0.129159823477731,0.506868376472335,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0,0.608175645870493,0.205421914329655,0.51968329191118,0.358053391334963,0,0.120195449519969,0.295379054349154,0.100966449948148,0.228620419965,0.201652370273681,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0,0,0.750729901804728,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0.103787347584177,0,0.512200817262403,0.729320151204882,0,0.367687016900028,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.256100609619477,0.0574354689556133,0,0.115884325944855,0.38581844092741,0,0,0.342869252385415,0,0,0.290692833264657,0.188218760830661,0.0846146078916765,0,0,0.543216455383447,0,0,0,0,0,0.385813221962283,0,0,0.214871054048298,0.382576664137687,0.220591419119515,0 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|phase1_expression=0,0.697950815278722,0,0,0.500895729946347,0,0,0,0.563154888606667,0,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0.137114433605739,0,0.0850432901510698,0.496454756004426,1.56719873483361,0,0.45881856213434,0,0.430761996159075,0.215471232685889,0.190023419456374,0.252030129759931,0.443461021310609,0,0.61506478758457,0,0.288851619751275,0.498703936075477,0.408338712524738,0,0.7813353445238,0,0.588231488031014,0,0,0.377690453926732,0.405507724878058,0.734187008646726,0,0,0,0.194429899074283,0.839918529752175,0,0,0,0.336093799142464,0.257259436035947,0,0,0,0,0,0.677689064138264,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0.340860645156116,1.03914401841148,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0,0.258937883647172,0,0.346970653532272,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0.255457055208591,2.51611761462433,3.59941638596045,2.03312363316904,0.149790639404823,0,0.125654352112864,0,0,0,0,0.101839363850316,0.248813941220186,0,0,0,0,0,0,0.136072998302656,0,0,0.258703370739016,0.431135985865684,0.189106080167819,0.351902248327898,0.657587197282725,0.278047249225598,0,0,0,2.1066395619397,2.57347907114715,2.27330799516474,0,0,0.180062061461015,0.473489471170421,0.590292695242212,0,0,0,0,0.329119699826961,0.164167464079095,0.0810688095458557,0,0.219550115291051,0.268412837520744,0,0.102904612379284,0.330418782983798,0,0.639864751605702,0,0,0.201683524623343,0,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0.398282546508734,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0,0.196558995113203,0.224862112384854,0.405720242777006,0.482354319504834,0.25462585178142,0.575392274901621,0.324270453550071,0.274561413188081,0,0.372140947668503,0,0,0,0,0,0.189491411770485,0.488894929326078,0.509235257325564,0.234690248288502,0,0.238043640886014,0.195133647857799,0.315270288212382,0,0.159454768657487,0,0.172684981865896,0,0,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0.36012218806262,0.258717367565509,0.428674070063185,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0,0.322928853391811,0.0603129249281559,0,0,0.291480836629851,0,0.341741761595705,0.206386867963223,0.370389054739423,0.376736914009382,0,0.457556346413045,4.58941760983409,4.47844647435706,5.11339903076368,0,0.316335993581135,0.406638934253697,0,0,0.655087691238533,0,0,0,0,0,0,0.299033092087958,0.165458490457098,0,0.129159823477731,0.506868376472335,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0,0.608175645870493,0.205421914329655,0.51968329191118,0.358053391334963,0,0.120195449519969,0.295379054349154,0.100966449948148,0.228620419965,0.201652370273681,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0,0,0.750729901804728,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0.103787347584177,0,0.512200817262403,0.729320151204882,0,0.367687016900028,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.256100609619477,0.0574354689556133,0,0.115884325944855,0.38581844092741,0,0,0.342869252385415,0,0,0.290692833264657,0.188218760830661,0.0846146078916765,0,0,0.543216455383447,0,0,0,0,0,0.385813221962283,0,0,0.214871054048298,0.382576664137687,0.220591419119515,0 | ||
|short_description=p5@Ripk3 | |short_description=p5@Ripk3 | ||
}} | }} |
Latest revision as of 04:00, 26 September 2015
Short description: | p5@Ripk3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Ripk3_5end |
Coexpression cluster: | MCL_coexpression_mm9:167 |
Association with transcript: | 107bp_to_ENSMUST00000022830, ENSMUST00000168716, NM_001164107, NM_001164108, NM_019955, uc007uav.2, uc007uaw.2, uc011zlp.1_5end |
EntrezGene: | Ripk3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 2.01e-18 | 19 |
granulocyte monocyte progenitor cell | 6.54e-17 | 7 |
hematopoietic cell | 5.56e-14 | 32 |
hematopoietic oligopotent progenitor cell | 5.56e-14 | 32 |
hematopoietic stem cell | 5.56e-14 | 32 |
hematopoietic multipotent progenitor cell | 5.56e-14 | 32 |
connective tissue cell | 4.91e-12 | 46 |
mesenchymal cell | 4.91e-12 | 46 |
motile cell | 3.87e-10 | 54 |
stem cell | 5.48e-10 | 97 |
myeloid cell | 1.46e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.91e-12 | 46 |
bone marrow | 1.46e-07 | 16 |