FFCP PHASE1:Mm9::chr5:67818913..67818930,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=666938 | |EntrezGene=666938 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=187 | |||
|TSSclassifier=NA | |||
|UniProt=P86174 | |UniProt=P86174 | ||
|association_with_transcript=107bp_to_ENSMUST00000169190,NM_001164806,uc012dws.1_5end | |association_with_transcript=107bp_to_ENSMUST00000169190,NM_001164806,uc012dws.1_5end | ||
|cluster_id=chr5:67818913..67818930,- | |||
|description=CAGE_peak_4_at_Bend4_5end | |description=CAGE_peak_4_at_Bend4_5end | ||
|id=chr5:67818913..67818930,- | |id=chr5:67818913..67818930,- | ||
|ontology_enrichment_celltype=CL:0000540!9.53e-08!33;CL:0000047!9.53e-08!33;CL:0000031!9.53e-08!33;CL:0000404!9.53e-08!33;CL:0000117!2.16e-07!23;CL:0000337!2.16e-07!23 | |ontology_enrichment_celltype=CL:0000540!9.53e-08!33;CL:0000047!9.53e-08!33;CL:0000031!9.53e-08!33;CL:0000404!9.53e-08!33;CL:0000117!2.16e-07!23;CL:0000337!2.16e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000034,7.60e-12,97;CL:0002609,3.42e-10,6;CL:0000117,4.74e-10,23;CL:0000337,4.74e-10,23;CL:0000540,9.87e-10,33;CL:0000047,9.87e-10,33;CL:0000031,9.87e-10,33;CL:0000404,9.87e-10,33;CL:0000393,1.22e-07,39;CL:0000211,1.22e-07,39;CL:0000221,2.46e-07,44;CL:0000133,2.46e-07,44;CL:0000723,4.17e-07,91;CL:0000048,4.17e-07,91;CL:0000349,6.75e-07,3;CL:0000351,6.75e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.35e-07!73;UBERON:0005743!1.35e-07!73;UBERON:0000073!2.77e-07!75;UBERON:0001016!2.77e-07!75;UBERON:0003056!7.22e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,6.75e-07,3;UBERON:0000307,6.75e-07,3;UBERON:0007010,6.75e-07,3 | |||
|phase1_expression=2.24208385946712,0,0.909998478779072,0,0,0,0,0,3.94208422024667,2.10658073689794,1.88339765048055,0.398860794976682,0.171200729931206,0.0874204024189974,0,0,0,0.157731082679119,0,0,0.425216450755349,1.29078236561151,1.04479915655574,0.319984845586813,0.45881856213434,0,0.430761996159075,0.215471232685889,0,0,0,0,1.23012957516914,0,0,0,0,0.418531630736908,0,0,0,0.683045484958446,0.485510353031154,0.125896817975577,0.101376931219515,0.183546752161682,0,0.436050312760893,0,0,0.139986421625363,0,0.167782606057736,0.725362142011344,16.8046899571232,0.771778308107841,0,0,2.22548106945558,2.64495489636016,1.90149421051854,0,0,0,0,0,0.299600110518405,0,1.14058573539325,1.62007125998029,1.47227472945967,0.571301968807607,0.220868540951614,1.83736198822431,1.91690942036473,4.5960939330501,0,0.255374676170375,0.46081959976873,1.05509030184155,1.18933936683133,0.52091337055676,0.279182999001381,0,0.916789486660861,1.17851434189467,0.854230084794618,2.98239113320481,0.075726193333184,0.0755715601067855,1.15945795480671,0,0,0,0,0,0,0,0,0,1.54927761754349,0,0,0,0,0,0,0.11418387971906,1.03575153458869,0.29688427812965,0,0,0,0,0.352766121407114,0,0.988779870937496,0,0,0,0,0.484875253135222,0,0,0,0,1.31796636956512,1.19980546198682,1.52484272487678,0.149790639404823,0.457500602818626,0.879580464790051,0.695297280769106,0.767146371990992,1.0389402227978,0.811206315338788,0.203678727700633,0.248813941220186,0,0.420883711772948,0.520481771850815,0,0.360124259610698,0.150704817835715,0.680364991513279,0.12811372028485,0.843315521037559,2.32833033665114,1.29340795759705,0.945530400839096,0.527853372491847,0.219195732427575,0,0,0.205782136407943,0.199034266818493,0,0,0.284163499395593,3.10688658803253,0.938104239924385,1.08037236876609,1.18372367792605,0.590292695242212,1.07986979021165,0.697601834251224,1.87791380979733,1.5179494507732,0.16455984991348,0,0.0810688095458557,0.146199987425332,0,0,0.630869845692382,1.64647379806855,0,0,0,0.464473343720877,0.38660238396628,0.201683524623343,0.22237804384487,0.380451252225118,0,0.329397909448022,0,0,0.38992817423824,0,0,0,1.13800740571849,0.228497025219458,0,0.814605311381257,0.581857461502877,0.561086559122548,0.126473074248515,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0.757965647081939,0.651859905768103,0.339490171550376,0,0.167506257441816,0.238043640886014,0.780534591431195,0.472905432318573,0,0.478364305972461,0.163863314715738,0,0.144649058581512,0,0,0,0,0.481651769963376,0.35163505977661,0,0,0.631016438832513,1.17131623288992,1.50796378412959,0.238968797952552,0.222798674082394,0,0.809621403349789,0.292255857911312,0,1.60660658210904,0.425820255624806,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0,0,0,0,0.340439605753788,0.18006109403131,0.388076051348264,1.92903331528433,0.354680467284547,0.891844088010353,0.164549020602121,0.304464949114599,0.23467170806371,1.27099242518292,0,0,0.322928853391811,0.120625849856312,0.238744688006273,0.164140899745061,0.291480836629851,0,0,0,0,0,0,0.457556346413045,2.54967644990783,2.51912614182584,1.93479963326193,0,0.790839983952838,0,0.108005340821801,0,0.218362563746178,0.269728692769641,0.247960367176008,0,0.129614973291793,0,1.69107881605257,0.747582730219894,0.330916980914195,1.16670713006429,0.129159823477731,0.168956125490778,0.234714477291508,0.5208175393758,2.62148361064277,2.17425708743405,0.864090018773596,0.316011120628178,0.202725215290164,0,0,0,0.198681354781265,0.240390899039938,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0,0,0,5.99362074109975,2.69141569828427,2.3503846290971,0,0,0.36630324853453,0,0,1.6942555278512,0,0.572895513439397,0.343706364687375,0.685082519770642,0.755393897389701,0,0.900642406448441,0,0.51776031175182,0.93408612825759,0.798049746802062,0.682934423016537,0.486213434136588,0.419226325255965,0.735374033800057,0.888986911206461,0.824140228955577,0.320919209591815,0.505394423527595,0.25347929989024,0.565879024158229,0.655490552289177,0.448176066834085,0.287177344778066,0,0.463537303779422,0.578727661391115,0,0,0.685738504770831,0.177475806159338,0,0,0.376437521661322,0.338458431566706,0.548783918618318,0.263069711437843,0.407412341537585,0.561142271657738,0.593175090620871,0.492522411877817,0.409231043169689,0.619747364743864,0.385813221962283,0.249810577937946,0.233931608445408,0.429742108096597,0,0.441182838239031,0 | |phase1_expression=2.24208385946712,0,0.909998478779072,0,0,0,0,0,3.94208422024667,2.10658073689794,1.88339765048055,0.398860794976682,0.171200729931206,0.0874204024189974,0,0,0,0.157731082679119,0,0,0.425216450755349,1.29078236561151,1.04479915655574,0.319984845586813,0.45881856213434,0,0.430761996159075,0.215471232685889,0,0,0,0,1.23012957516914,0,0,0,0,0.418531630736908,0,0,0,0.683045484958446,0.485510353031154,0.125896817975577,0.101376931219515,0.183546752161682,0,0.436050312760893,0,0,0.139986421625363,0,0.167782606057736,0.725362142011344,16.8046899571232,0.771778308107841,0,0,2.22548106945558,2.64495489636016,1.90149421051854,0,0,0,0,0,0.299600110518405,0,1.14058573539325,1.62007125998029,1.47227472945967,0.571301968807607,0.220868540951614,1.83736198822431,1.91690942036473,4.5960939330501,0,0.255374676170375,0.46081959976873,1.05509030184155,1.18933936683133,0.52091337055676,0.279182999001381,0,0.916789486660861,1.17851434189467,0.854230084794618,2.98239113320481,0.075726193333184,0.0755715601067855,1.15945795480671,0,0,0,0,0,0,0,0,0,1.54927761754349,0,0,0,0,0,0,0.11418387971906,1.03575153458869,0.29688427812965,0,0,0,0,0.352766121407114,0,0.988779870937496,0,0,0,0,0.484875253135222,0,0,0,0,1.31796636956512,1.19980546198682,1.52484272487678,0.149790639404823,0.457500602818626,0.879580464790051,0.695297280769106,0.767146371990992,1.0389402227978,0.811206315338788,0.203678727700633,0.248813941220186,0,0.420883711772948,0.520481771850815,0,0.360124259610698,0.150704817835715,0.680364991513279,0.12811372028485,0.843315521037559,2.32833033665114,1.29340795759705,0.945530400839096,0.527853372491847,0.219195732427575,0,0,0.205782136407943,0.199034266818493,0,0,0.284163499395593,3.10688658803253,0.938104239924385,1.08037236876609,1.18372367792605,0.590292695242212,1.07986979021165,0.697601834251224,1.87791380979733,1.5179494507732,0.16455984991348,0,0.0810688095458557,0.146199987425332,0,0,0.630869845692382,1.64647379806855,0,0,0,0.464473343720877,0.38660238396628,0.201683524623343,0.22237804384487,0.380451252225118,0,0.329397909448022,0,0,0.38992817423824,0,0,0,1.13800740571849,0.228497025219458,0,0.814605311381257,0.581857461502877,0.561086559122548,0.126473074248515,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0.757965647081939,0.651859905768103,0.339490171550376,0,0.167506257441816,0.238043640886014,0.780534591431195,0.472905432318573,0,0.478364305972461,0.163863314715738,0,0.144649058581512,0,0,0,0,0.481651769963376,0.35163505977661,0,0,0.631016438832513,1.17131623288992,1.50796378412959,0.238968797952552,0.222798674082394,0,0.809621403349789,0.292255857911312,0,1.60660658210904,0.425820255624806,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0,0,0,0,0.340439605753788,0.18006109403131,0.388076051348264,1.92903331528433,0.354680467284547,0.891844088010353,0.164549020602121,0.304464949114599,0.23467170806371,1.27099242518292,0,0,0.322928853391811,0.120625849856312,0.238744688006273,0.164140899745061,0.291480836629851,0,0,0,0,0,0,0.457556346413045,2.54967644990783,2.51912614182584,1.93479963326193,0,0.790839983952838,0,0.108005340821801,0,0.218362563746178,0.269728692769641,0.247960367176008,0,0.129614973291793,0,1.69107881605257,0.747582730219894,0.330916980914195,1.16670713006429,0.129159823477731,0.168956125490778,0.234714477291508,0.5208175393758,2.62148361064277,2.17425708743405,0.864090018773596,0.316011120628178,0.202725215290164,0,0,0,0.198681354781265,0.240390899039938,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0,0,0,5.99362074109975,2.69141569828427,2.3503846290971,0,0,0.36630324853453,0,0,1.6942555278512,0,0.572895513439397,0.343706364687375,0.685082519770642,0.755393897389701,0,0.900642406448441,0,0.51776031175182,0.93408612825759,0.798049746802062,0.682934423016537,0.486213434136588,0.419226325255965,0.735374033800057,0.888986911206461,0.824140228955577,0.320919209591815,0.505394423527595,0.25347929989024,0.565879024158229,0.655490552289177,0.448176066834085,0.287177344778066,0,0.463537303779422,0.578727661391115,0,0,0.685738504770831,0.177475806159338,0,0,0.376437521661322,0.338458431566706,0.548783918618318,0.263069711437843,0.407412341537585,0.561142271657738,0.593175090620871,0.492522411877817,0.409231043169689,0.619747364743864,0.385813221962283,0.249810577937946,0.233931608445408,0.429742108096597,0,0.441182838239031,0 | ||
|short_description=p4@Bend4 | |short_description=p4@Bend4 | ||
}} | }} |
Latest revision as of 04:25, 26 September 2015
Short description: | p4@Bend4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Bend4_5end |
Coexpression cluster: | MCL_coexpression_mm9:187 |
Association with transcript: | 107bp_to_ENSMUST00000169190, NM_001164806, uc012dws.1_5end |
EntrezGene: | Bend4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 7.60e-12 | 97 |
neuron of cerebral cortex | 3.42e-10 | 6 |
CNS neuron (sensu Vertebrata) | 4.74e-10 | 23 |
neuroblast (sensu Vertebrata) | 4.74e-10 | 23 |
neuron | 9.87e-10 | 33 |
neuronal stem cell | 9.87e-10 | 33 |
neuroblast | 9.87e-10 | 33 |
electrically signaling cell | 9.87e-10 | 33 |
electrically responsive cell | 1.22e-07 | 39 |
electrically active cell | 1.22e-07 | 39 |
ectodermal cell | 2.46e-07 | 44 |
neurectodermal cell | 2.46e-07 | 44 |
somatic stem cell | 4.17e-07 | 91 |
multi fate stem cell | 4.17e-07 | 91 |
extraembryonic cell | 6.75e-07 | 3 |
trophoblast cell | 6.75e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 6.75e-07 | 3 |
blastula | 6.75e-07 | 3 |
cleaving embryo | 6.75e-07 | 3 |