FFCP PHASE1:Mm9::chr7:17428398..17428426,+: Difference between revisions
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{{FFCP|EntrezGene=101540|HGNC=|MCL_coexpression_id=1721|UniProt=Q8BZ03|association_with_transcript=0bp_to_ENSMUST00000086104,NM_178900,uc009fih.1_5end|description=CAGE_peak_3_at_Prkd2_5end|id=chr7:17428398..17428426,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000065!5.28e-09!41;UBERON:0001004!9.53e-09!42;UBERON:0004177!1.02e-07!29;UBERON:0003081!2.88e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0000065,1.69e-09,41;UBERON:0001004,3.16e-09,42;UBERON:0004177,5.50e-08,29;UBERON:0005057,5.50e-08,29;UBERON:0003081,2.78e-07,87;UBERON:0002370,8.99e-07,23;UBERON:0000974,8.99e-07,23;UBERON:0004807,8.99e-07,23;UBERON:0005058,8.99e-07,23;UBERON:0003351,8.99e-07,23;UBERON:0009113,8.99e-07,23;UBERON:0003295,8.99e-07,23;UBERON:0009722,8.99e-07,23;UBERON:0005562,8.99e-07,23;UBERON:0007690,8.99e-07,23;UBERON:0002048,9.05e-07,14;UBERON:0000117,9.05e-07,14;UBERON:0000171,9.05e-07,14;UBERON:0000170,9.05e-07,14;UBERON:0005597,9.05e-07,14;UBERON:0000118,9.05e-07,14|phase1_expression=2.88267924788629,1.39590163055744,0.454999239389536,0.30246421130683,1.00179145989269,0,0.467225281191051,28.6653778040299,9.57363310631334,17.7889040004715,0.513653904676515,0.558405112967355,37.4929598549341,32.432969297448,1.66554880907831,5.4668322195253,0.699561878128147,20.1895785829272,22.2125382441297,23.3414308488917,6.88850650223665,4.17021995043718,1.04479915655574,2.07990149631429,0.91763712426868,0.57423196411502,0.86152399231815,0.430942465371778,0.380046838912748,0.504060259519861,0.443461021310609,0.635030673459631,0,0,0,0.332469290716985,0.204169356262369,10.0447591376858,9.37602413428561,8.89990364755457,9.99993529652724,14.3439551841274,7.76816564849846,3.39921408534059,4.46058497365864,3.67093504323363,10.9534788208725,1.52617609466313,2.41654801007919,3.11087838518853,2.37976916763116,1.43752564364972,14.4293041209653,27.5637613964311,45.0365690850902,0.771778308107841,1.43266719969378,1.03134418455488,0.809265843438391,1.05798195854407,0.633831403506179,5.08266798103698,6.22506357277798,0,0,0,1.19840044207362,2.30530983192933,1.14058573539325,1.4850653216486,2.10324961351382,1.71390590642282,1.98781686856452,0.979926393719632,1.62937300731002,0.919218786610021,1.10115880999389,1.40456071893706,0.614426133024974,0.791317726381163,0.640413505216868,0.52091337055676,0.837548997004143,0.56276261003168,0.763991238884051,0.883885756421003,1.42371680799103,1.3047961207771,0.530083353332288,0.0755715601067855,28.1168554040627,5.16254326188832,0,0,1.29955283489534,0.896053774194671,4.21333260395256,0.681721290312231,0.259786004602869,0.70667914902068,0.281686839553361,0,5.09610479413291,0,0.216491041011214,0.253359865475099,0,3.9964357901671,53.3412040313174,5.34391700633369,3.29622120855658,3.95805121805784,3.22861696158482,1.95939432718409,5.52666923537813,2.38766523526383,0.988779870937496,11.423349196673,4.42305275974937,3.07357014900077,3.97514733228708,4.84875253135222,1.86391761218122,1.17112318804619,0.83778682725382,2.29911349687732,4.67278985573089,1.79970819298022,2.54140454146129,0.748953197024114,1.37250180845588,0.502617408451458,1.73824320192276,0,1.0389402227978,0.486723789203273,5.6011650117674,5.10068579501381,5.30717792710717,2.10441855886474,3.90361328888111,2.29902104433473,4.86167750474443,3.76762044589288,3.12967896096108,3.20284300712124,2.24884138943349,2.32833033665114,4.95806383745537,5.48407632486676,7.03804496655795,7.67185063496512,11.3999372182495,11.1440693287093,9.67176041117334,4.97585667046233,0,1.02939162845886,0,5.59239585845855,6.3322036194896,2.88099298337624,5.68187365404505,5.1158700254325,6.32495162838251,4.18561100550734,5.09719462659276,5.60473643362414,5.26591519723137,13.4617320544858,12.4035278605159,9.5029991826466,14.2707574939183,12.6154033634749,1.68231958851302,1.74937841044784,0.330418782983798,1.05780226665418,2.13288250535234,4.18026009348789,4.89696353023955,4.63872106633688,4.00280478920767,3.42406127002606,1.42358718463353,2.79988223030818,3.2673577144035,3.38226002469956,3.11942539390592,1.79763881730844,1.72910439899755,1.99141273254367,3.98302592001472,3.88444942873078,5.63538678365402,4.88763186828754,5.04276466635827,4.55882829287071,6.57659986092276,3.54264355151045,4.86696056308262,2.34454611451421,0.889357881261447,1.66845105716094,1.37591296579242,0.899448449539415,0.608580364165509,0.964708639009667,1.52775511068852,3.45235364940973,2.43202840162553,1.37280706594041,2.87536413054709,3.34926852901653,4.05648975048929,2.77836765741823,0.896987067609561,1.92977408545347,27.1587189544909,2.65287976478679,6.02970412835496,5.43184274480602,8.21415869009757,10.3853879613926,11.9021820443007,17.5620283072019,16.7093252752562,17.0527811029557,14.6698387164888,17.6972379892997,14.6782234586011,17.7918342055259,0,0,5.90117127622843,4.13905119457099,1.12385412991454,1.28932855251423,0.655739781506702,6.5642441073137,1.57754109708128,2.34263246577983,1.07711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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=101540 | |||
|HGNC= | |||
|MCL_coexpression_id=1721 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BZ03 | |||
|association_with_transcript=0bp_to_ENSMUST00000086104,NM_178900,uc009fih.1_5end | |||
|cluster_id=chr7:17428398..17428426,+ | |||
|description=CAGE_peak_3_at_Prkd2_5end | |||
|id=chr7:17428398..17428426,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000065!5.28e-09!41;UBERON:0001004!9.53e-09!42;UBERON:0004177!1.02e-07!29;UBERON:0003081!2.88e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000065,1.69e-09,41;UBERON:0001004,3.16e-09,42;UBERON:0004177,5.50e-08,29;UBERON:0005057,5.50e-08,29;UBERON:0003081,2.78e-07,87;UBERON:0002370,8.99e-07,23;UBERON:0000974,8.99e-07,23;UBERON:0004807,8.99e-07,23;UBERON:0005058,8.99e-07,23;UBERON:0003351,8.99e-07,23;UBERON:0009113,8.99e-07,23;UBERON:0003295,8.99e-07,23;UBERON:0009722,8.99e-07,23;UBERON:0005562,8.99e-07,23;UBERON:0007690,8.99e-07,23;UBERON:0002048,9.05e-07,14;UBERON:0000117,9.05e-07,14;UBERON:0000171,9.05e-07,14;UBERON:0000170,9.05e-07,14;UBERON:0005597,9.05e-07,14;UBERON:0000118,9.05e-07,14 | |||
|phase1_expression=2.88267924788629,1.39590163055744,0.454999239389536,0.30246421130683,1.00179145989269,0,0.467225281191051,28.6653778040299,9.57363310631334,17.7889040004715,0.513653904676515,0.558405112967355,37.4929598549341,32.432969297448,1.66554880907831,5.4668322195253,0.699561878128147,20.1895785829272,22.2125382441297,23.3414308488917,6.88850650223665,4.17021995043718,1.04479915655574,2.07990149631429,0.91763712426868,0.57423196411502,0.86152399231815,0.430942465371778,0.380046838912748,0.504060259519861,0.443461021310609,0.635030673459631,0,0,0,0.332469290716985,0.204169356262369,10.0447591376858,9.37602413428561,8.89990364755457,9.99993529652724,14.3439551841274,7.76816564849846,3.39921408534059,4.46058497365864,3.67093504323363,10.9534788208725,1.52617609466313,2.41654801007919,3.11087838518853,2.37976916763116,1.43752564364972,14.4293041209653,27.5637613964311,45.0365690850902,0.771778308107841,1.43266719969378,1.03134418455488,0.809265843438391,1.05798195854407,0.633831403506179,5.08266798103698,6.22506357277798,0,0,0,1.19840044207362,2.30530983192933,1.14058573539325,1.4850653216486,2.10324961351382,1.71390590642282,1.98781686856452,0.979926393719632,1.62937300731002,0.919218786610021,1.10115880999389,1.40456071893706,0.614426133024974,0.791317726381163,0.640413505216868,0.52091337055676,0.837548997004143,0.56276261003168,0.763991238884051,0.883885756421003,1.42371680799103,1.3047961207771,0.530083353332288,0.0755715601067855,28.1168554040627,5.16254326188832,0,0,1.29955283489534,0.896053774194671,4.21333260395256,0.681721290312231,0.259786004602869,0.70667914902068,0.281686839553361,0,5.09610479413291,0,0.216491041011214,0.253359865475099,0,3.9964357901671,53.3412040313174,5.34391700633369,3.29622120855658,3.95805121805784,3.22861696158482,1.95939432718409,5.52666923537813,2.38766523526383,0.988779870937496,11.423349196673,4.42305275974937,3.07357014900077,3.97514733228708,4.84875253135222,1.86391761218122,1.17112318804619,0.83778682725382,2.29911349687732,4.67278985573089,1.79970819298022,2.54140454146129,0.748953197024114,1.37250180845588,0.502617408451458,1.73824320192276,0,1.0389402227978,0.486723789203273,5.6011650117674,5.10068579501381,5.30717792710717,2.10441855886474,3.90361328888111,2.29902104433473,4.86167750474443,3.76762044589288,3.12967896096108,3.20284300712124,2.24884138943349,2.32833033665114,4.95806383745537,5.48407632486676,7.03804496655795,7.67185063496512,11.3999372182495,11.1440693287093,9.67176041117334,4.97585667046233,0,1.02939162845886,0,5.59239585845855,6.3322036194896,2.88099298337624,5.68187365404505,5.1158700254325,6.32495162838251,4.18561100550734,5.09719462659276,5.60473643362414,5.26591519723137,13.4617320544858,12.4035278605159,9.5029991826466,14.2707574939183,12.6154033634749,1.68231958851302,1.74937841044784,0.330418782983798,1.05780226665418,2.13288250535234,4.18026009348789,4.89696353023955,4.63872106633688,4.00280478920767,3.42406127002606,1.42358718463353,2.79988223030818,3.2673577144035,3.38226002469956,3.11942539390592,1.79763881730844,1.72910439899755,1.99141273254367,3.98302592001472,3.88444942873078,5.63538678365402,4.88763186828754,5.04276466635827,4.55882829287071,6.57659986092276,3.54264355151045,4.86696056308262,2.34454611451421,0.889357881261447,1.66845105716094,1.37591296579242,0.899448449539415,0.608580364165509,0.964708639009667,1.52775511068852,3.45235364940973,2.43202840162553,1.37280706594041,2.87536413054709,3.34926852901653,4.05648975048929,2.77836765741823,0.896987067609561,1.92977408545347,27.1587189544909,2.65287976478679,6.02970412835496,5.43184274480602,8.21415869009757,10.3853879613926,11.9021820443007,17.5620283072019,16.7093252752562,17.0527811029557,14.6698387164888,17.6972379892997,14.6782234586011,17.7918342055259,0,0,5.90117127622843,4.13905119457099,1.12385412991454,1.28932855251423,0.655739781506702,6.5642441073137,1.57754109708128,2.34263246577983,1.07711698866399,1.43381278771531,0.445597348164788,1.98153571552183,2.83367491172426,3.21481443702443,1.97643888973262,1.60660658210904,4.25820255624806,5.34196811001766,5.53815661802159,6.59880491890142,1.32745138339963,3.64170954232472,2.72091201268276,3.39489143560617,3.2483208216885,6.45613810682248,6.20227903603731,2.54473610634254,4.9909632973861,3.16036757935816,2.10837217149998,1.03135543248187,3.06395645178409,3.78128297465751,4.78627129996192,2.7863814554107,8.86701168211368,5.35106452806212,5.43011767986999,5.17590413494819,1.87737366450968,0.63549621259146,1.7642271844397,5.44124634706884,10.9795810153216,4.16159182004275,3.10368094408155,2.29797259643086,3.49777003955821,0.556275906031529,8.88528580148834,7.42992724667601,5.00025223898222,4.33247451110789,9.02181902958766,5.26189798375002,12.2384469595576,14.9748053986314,9.25939824489639,1.90934123603023,2.84702394223022,4.87966721104437,3.67218158794124,3.76358932826044,3.49380101993884,4.85511646985355,3.80205896336545,2.09404753587224,1.03691978633434,2.4853572523477,0,2.24274819065968,1.98550188548517,1.944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| |||
|short_description=p3@Prkd2 | |||
}} |
Latest revision as of 07:15, 26 September 2015
Short description: | p3@Prkd2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Prkd2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1721 |
Association with transcript: | 0bp_to_ENSMUST00000086104, NM_178900, uc009fih.1_5end |
EntrezGene: | Prkd2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory tract | 1.69e-09 | 41 |
respiratory system | 3.16e-09 | 42 |
hemopoietic organ | 5.50e-08 | 29 |
immune organ | 5.50e-08 | 29 |
lateral plate mesoderm | 2.78e-07 | 87 |
thymus | 8.99e-07 | 23 |
neck | 8.99e-07 | 23 |
respiratory system epithelium | 8.99e-07 | 23 |
hemolymphoid system gland | 8.99e-07 | 23 |
pharyngeal epithelium | 8.99e-07 | 23 |
thymic region | 8.99e-07 | 23 |
pharyngeal gland | 8.99e-07 | 23 |
entire pharyngeal arch endoderm | 8.99e-07 | 23 |
thymus primordium | 8.99e-07 | 23 |
early pharyngeal endoderm | 8.99e-07 | 23 |
lung | 9.05e-07 | 14 |
respiratory tube | 9.05e-07 | 14 |
respiration organ | 9.05e-07 | 14 |
pair of lungs | 9.05e-07 | 14 |
lung primordium | 9.05e-07 | 14 |
lung bud | 9.05e-07 | 14 |