FFCP PHASE1:Mm9::chr14:70576594..70576631,-: Difference between revisions
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{{FFCP|EntrezGene=213019|HGNC=|UniProt=Q8R1G6|association_with_transcript=0bp_to_ENSMUST00000141363,ENSMUST00000153735,NM_001253736_5end|description=CAGE_peak_1_at_Pdlim2_5end|id=chr14:70576594..70576631,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005178!6.16e-08!17;UBERON:0005181!6.16e-08!17;UBERON:0002224!6.16e-08!17;UBERON:0000915!6.16e-08!17;UBERON:0008947!6.16e-08!17;UBERON:0003258!6.16e-08!17;UBERON:0002048!1.64e-07!14;UBERON:0000117!1.64e-07!14;UBERON:0000171!1.64e-07!14;UBERON:0000170!1.64e-07!14;UBERON:0005597!1.64e-07!14;UBERON:0000118!1.64e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0005178,5.80e-08,17;UBERON:0005181,5.80e-08,17;UBERON:0002224,5.80e-08,17;UBERON:0000915,5.80e-08,17;UBERON:0008947,5.80e-08,17;UBERON:0003258,5.80e-08,17;UBERON:0002048,1.55e-07,14;UBERON:0000117,1.55e-07,14;UBERON:0000171,1.55e-07,14;UBERON:0000170,1.55e-07,14;UBERON:0005597,1.55e-07,14;UBERON:0000118,1.55e-07,14|phase1_expression=1.76163731815273,98.0620895466605,76.8948714568316,72.893874924946,75.6352552218984,13.9339795686869,11.4470193891808,10.0716192284429,3.66050677594334,6.08567768437183,2.56826952338257,1.59544317990673,7.70403284690426,6.46910977900581,5.66286595086627,2.83465374345756,2.09868563438444,11.0411757875383,12.3402990245165,9.33657233955666,29.4249783922701,0.297872853602656,0.261199789138935,33.438416363822,27.5291137280604,71.7789955143775,68.4911573892929,53.6523369387864,49.2160656392008,37.0484290747098,47.0068682589246,0,0,0,0,2.65975432573588,0.612508068787107,51.8979222113766,30.4720784364282,19.3703785270305,37.0585837459539,46.4470929771743,39.3263385955234,94.6744071176341,88.8061917482948,14.5001934207728,138.483267949603,155.451936499258,249.56350358636,232.538159292843,65.0936860557936,138.002461790373,4.86569557567435,12.3311564141929,5.71359458542189,38.0743965333202,104.584705577646,91.7896324253847,0.404632921719196,1.05798195854407,0.633831403506179,54.8928141951994,23.1216646988896,14.8483453351431,17.7995945262055,17.7620028736525,48.5352179039816,86.8333370026713,0,0.135005938331691,0.420649922702764,0.856952953211411,1.54607978666129,0.244981598429908,0.191690942036473,0,1.10115880999389,0.893811366596314,0.614426133024974,0.527545150920775,0.274462930807229,0.52091337055676,1.3959149950069,2.25105044012672,2.59757021220577,1.47314292736834,0.142371680799103,0.559198337475902,0.37863096666592,1.20914496170857,7.53647670624362,0,0,0,0,0.448026887097336,9.83110940922263,55.7307154830249,48.3201968561336,60.7744068157785,2.53518155598025,91.1117989641657,145.238986632788,149.3240076622,19.0512116089868,23.5624674891842,16.1767822404731,13.7020655662872,5.95557132388495,35.4776712364931,0.693941307064543,10.0473607843007,25.1370892009104,41.9008940736291,37.5107975762898,22.2429866653526,130.518942963749,8.82056077211461,5.30766331169925,4.20593809863264,4.63767188766826,8.24287930329878,22.3670113461747,2.04946557908083,1.8850203613211,52.6241533729698,0.359445373517761,0,0.889491589511453,1.04853447583376,3.20250421973039,0.879580464790051,2.60736480288415,1.02286182932132,1.0389402227978,1.78465389374533,9.06370338267815,8.8328949133166,7.58168275301024,4.41927897361595,0.260240885925407,0,0.900310649026746,1.80845781402858,1.49680298132921,1.2811372028485,0.749613796477831,5.43277078551933,0.215567992932842,0.378212160335639,0.351902248327898,1.31517439456545,4.44875598760957,28.9049298213398,29.01528123352,3.38358253591438,0,1.02939162845886,0.852490498186778,1.86413195281952,1.17263029990548,1.98068267607116,2.84093682702252,1.57411385397923,1.54267112887378,1.62773761325285,3.48755421819505,2.56883753207773,1.97471819896177,1.97000956894914,2.99954595319666,3.36259971078264,1.97595103761946,7.24714661306008,2.73376933133365,1.9551876352064,59.4753809370836,43.3698929328213,1.06644125267617,1.39342003116263,3.09281907173024,7.86565746031036,18.2349995952794,31.9579051869099,40.809499292828,51.0566759644434,37.4489461112402,41.7808591286417,43.6719555146829,52.1315257019448,31.9884313814547,33.2565926334793,3.22435431620239,3.88444942873078,5.63538678365402,9.36796108088446,11.0552917685547,12.6244475802573,16.2517900409341,16.679946721695,15.8568715119789,16.9054114572867,1.48226313543574,0.333690211432188,0.196558995113203,0.674586337154561,0.608580364165509,1.68824011826692,4.83789118384698,9.20627639842594,2.59416362840057,1.92192989231657,4.31304619582064,7.07067800570156,1.24815069245824,1.76805214562978,1.25578189465339,1.92977408545347,158.702990353113,3.97931964718018,19.066902243717,18.8417045210459,38.4892007193143,100.671260722531,137.589224432116,166.64413527056,79.2904774854141,83.9351173768857,90.4108538287952,111.09932737727,103.438304137671,138.71844717967,6.03165135757089,8.15858525728064,2.45882136509518,2.48343071674259,1.12385412991454,2.46144541843627,8.85248705034047,1.76729649043061,1.89304931649754,2.34263246577983,0.2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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=213019 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q8R1G6 | |||
|association_with_transcript=0bp_to_ENSMUST00000141363,ENSMUST00000153735,NM_001253736_5end | |||
|cluster_id=chr14:70576594..70576631,- | |||
|description=CAGE_peak_1_at_Pdlim2_5end | |||
|id=chr14:70576594..70576631,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!6.16e-08!17;UBERON:0005181!6.16e-08!17;UBERON:0002224!6.16e-08!17;UBERON:0000915!6.16e-08!17;UBERON:0008947!6.16e-08!17;UBERON:0003258!6.16e-08!17;UBERON:0002048!1.64e-07!14;UBERON:0000117!1.64e-07!14;UBERON:0000171!1.64e-07!14;UBERON:0000170!1.64e-07!14;UBERON:0005597!1.64e-07!14;UBERON:0000118!1.64e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005178,5.80e-08,17;UBERON:0005181,5.80e-08,17;UBERON:0002224,5.80e-08,17;UBERON:0000915,5.80e-08,17;UBERON:0008947,5.80e-08,17;UBERON:0003258,5.80e-08,17;UBERON:0002048,1.55e-07,14;UBERON:0000117,1.55e-07,14;UBERON:0000171,1.55e-07,14;UBERON:0000170,1.55e-07,14;UBERON:0005597,1.55e-07,14;UBERON:0000118,1.55e-07,14 | |||
|phase1_expression=1.76163731815273,98.0620895466605,76.8948714568316,72.893874924946,75.6352552218984,13.9339795686869,11.4470193891808,10.0716192284429,3.66050677594334,6.08567768437183,2.56826952338257,1.59544317990673,7.70403284690426,6.46910977900581,5.66286595086627,2.83465374345756,2.09868563438444,11.0411757875383,12.3402990245165,9.33657233955666,29.4249783922701,0.297872853602656,0.261199789138935,33.438416363822,27.5291137280604,71.7789955143775,68.4911573892929,53.6523369387864,49.2160656392008,37.0484290747098,47.0068682589246,0,0,0,0,2.65975432573588,0.612508068787107,51.8979222113766,30.4720784364282,19.3703785270305,37.0585837459539,46.4470929771743,39.3263385955234,94.6744071176341,88.8061917482948,14.5001934207728,138.483267949603,155.451936499258,249.56350358636,232.538159292843,65.0936860557936,138.002461790373,4.86569557567435,12.3311564141929,5.71359458542189,38.0743965333202,104.584705577646,91.7896324253847,0.404632921719196,1.05798195854407,0.633831403506179,54.8928141951994,23.1216646988896,14.8483453351431,17.7995945262055,17.7620028736525,48.5352179039816,86.8333370026713,0,0.135005938331691,0.420649922702764,0.856952953211411,1.54607978666129,0.244981598429908,0.191690942036473,0,1.10115880999389,0.893811366596314,0.614426133024974,0.527545150920775,0.274462930807229,0.52091337055676,1.3959149950069,2.25105044012672,2.59757021220577,1.47314292736834,0.142371680799103,0.559198337475902,0.37863096666592,1.20914496170857,7.53647670624362,0,0,0,0,0.448026887097336,9.83110940922263,55.7307154830249,48.3201968561336,60.7744068157785,2.53518155598025,91.1117989641657,145.238986632788,149.3240076622,19.0512116089868,23.5624674891842,16.1767822404731,13.7020655662872,5.95557132388495,35.4776712364931,0.693941307064543,10.0473607843007,25.1370892009104,41.9008940736291,37.5107975762898,22.2429866653526,130.518942963749,8.82056077211461,5.30766331169925,4.20593809863264,4.63767188766826,8.24287930329878,22.3670113461747,2.04946557908083,1.8850203613211,52.6241533729698,0.359445373517761,0,0.889491589511453,1.04853447583376,3.20250421973039,0.879580464790051,2.60736480288415,1.02286182932132,1.0389402227978,1.78465389374533,9.06370338267815,8.8328949133166,7.58168275301024,4.41927897361595,0.260240885925407,0,0.900310649026746,1.80845781402858,1.49680298132921,1.2811372028485,0.749613796477831,5.43277078551933,0.215567992932842,0.378212160335639,0.351902248327898,1.31517439456545,4.44875598760957,28.9049298213398,29.01528123352,3.38358253591438,0,1.02939162845886,0.852490498186778,1.86413195281952,1.17263029990548,1.98068267607116,2.84093682702252,1.57411385397923,1.54267112887378,1.62773761325285,3.48755421819505,2.56883753207773,1.97471819896177,1.97000956894914,2.99954595319666,3.36259971078264,1.97595103761946,7.24714661306008,2.73376933133365,1.9551876352064,59.4753809370836,43.3698929328213,1.06644125267617,1.39342003116263,3.09281907173024,7.86565746031036,18.2349995952794,31.9579051869099,40.809499292828,51.0566759644434,37.4489461112402,41.7808591286417,43.6719555146829,52.1315257019448,31.9884313814547,33.2565926334793,3.22435431620239,3.88444942873078,5.63538678365402,9.36796108088446,11.0552917685547,12.6244475802573,16.2517900409341,16.679946721695,15.8568715119789,16.9054114572867,1.48226313543574,0.333690211432188,0.196558995113203,0.674586337154561,0.608580364165509,1.68824011826692,4.83789118384698,9.20627639842594,2.59416362840057,1.92192989231657,4.31304619582064,7.07067800570156,1.24815069245824,1.76805214562978,1.25578189465339,1.92977408545347,158.702990353113,3.97931964718018,19.066902243717,18.8417045210459,38.4892007193143,100.671260722531,137.589224432116,166.64413527056,79.2904774854141,83.9351173768857,90.4108538287952,111.09932737727,103.438304137671,138.71844717967,6.03165135757089,8.15858525728064,2.45882136509518,2.48343071674259,1.12385412991454,2.46144541843627,8.85248705034047,1.76729649043061,1.89304931649754,2.34263246577983,0.215423397732799,4.30143836314594,1.11399337041197,0,1.21443210502468,3.21481443702443,2.37172666767914,2.57057053137446,16.3231097989509,10.3278050127008,7.98146100832523,14.3524006986106,1.32745138339963,3.8844901784797,4.23252979750651,3.77210159511796,3.54362271456927,3.3817866273832,15.7641258832615,3.99887102425256,4.27796854061666,5.05658812697306,0,2.06271086496374,3.06395645178409,0,0.517434735131018,0.643011105094777,1.41872186913819,1.78368817602071,2.63278432963394,6.39376393140658,42.7102508675953,73.5057285897456,39.2540548537832,67.7682499589483,45.5329683282454,37.8765168548819,51.9269696413644,49.2422699235184,56.2558014695612,3.52308073819968,8.54354403989263,21.2578474002119,15.5563402990558,3.20226376907975,6.28793447516716,7.77845788902177,2.03974115992626,2.6590775941495,4.28419918793714,20.0480829783174,1.10717597753397,2.84647253977588,5.07625101862466,20.2815647134035,22.2729815021101,20.3645163041079,14.8776220305605,19.8934515907862,22.0345454596048,1.24267862617385,6.76431526421028,9.56905894681464,10.092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| |||
|short_description=p1@Pdlim2 | |||
}} |
Latest revision as of 08:11, 26 September 2015
Short description: | p1@Pdlim2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pdlim2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000141363, ENSMUST00000153735, NM_001253736_5end |
EntrezGene: | Pdlim2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thoracic cavity element | 5.80e-08 | 17 |
thoracic segment organ | 5.80e-08 | 17 |
thoracic cavity | 5.80e-08 | 17 |
thoracic segment of trunk | 5.80e-08 | 17 |
respiratory primordium | 5.80e-08 | 17 |
endoderm of foregut | 5.80e-08 | 17 |
lung | 1.55e-07 | 14 |
respiratory tube | 1.55e-07 | 14 |
respiration organ | 1.55e-07 | 14 |
pair of lungs | 1.55e-07 | 14 |
lung primordium | 1.55e-07 | 14 |
lung bud | 1.55e-07 | 14 |