FFCP PHASE1:Mm9::chr2:181428267..181428295,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr2:181428267..181428295,- to FFCP PHASE1:Mm9::chr2:181428267..181428295,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=56470 | |EntrezGene=56470 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=40bp_to_ENSMUST00000143510_5end | |||
|cluster_id=chr2:181428267..181428295,- | |||
|description=CAGE_peak_3_at_Rgs19_5end | |||
|id=chr2:181428267..181428295,- | |||
|ontology_enrichment_celltype=CL:0000988!1.00e-07!32;CL:0002032!1.00e-07!32;CL:0000037!1.00e-07!32;CL:0000566!1.00e-07!32;CL:0000837!1.00e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.86e-11,32;CL:0002032,1.86e-11,32;CL:0000037,1.86e-11,32;CL:0000837,1.86e-11,32;CL:0000049,3.26e-08,19;CL:0002320,9.19e-08,46;CL:0000134,9.19e-08,46;CL:0002031,2.96e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.63e-13!48;UBERON:0002405!2.43e-12!70;UBERON:0002390!4.43e-12!45;UBERON:0003061!4.43e-12!45;UBERON:0004177!6.52e-08!29;UBERON:0001474!4.17e-07!22;UBERON:0004765!4.17e-07!22;UBERON:0001434!4.17e-07!22;UBERON:0001041!4.57e-07!92;UBERON:0005057!5.45e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.36e-18,48;UBERON:0002405,2.36e-18,48;UBERON:0002390,5.94e-16,45;UBERON:0003061,5.94e-16,45;UBERON:0001474,1.38e-10,22;UBERON:0004765,1.38e-10,22;UBERON:0001434,1.38e-10,22;UBERON:0002204,1.57e-09,32;UBERON:0004177,1.19e-08,29;UBERON:0005057,1.19e-08,29;UBERON:0001041,1.21e-08,80;UBERON:0002371,1.79e-08,16;UBERON:0002106,8.22e-08,6;UBERON:0004457,8.22e-08,6;UBERON:0000042,8.22e-08,6;UBERON:0004854,8.22e-08,6;UBERON:0009034,8.22e-08,6;UBERON:0002095,8.22e-08,6;UBERON:0004782,8.22e-08,6;UBERON:0003281,8.22e-08,6;UBERON:0009664,8.22e-08,6;UBERON:0002296,8.22e-08,6;UBERON:0005602,8.22e-08,6;UBERON:0001179,8.22e-08,6;UBERON:0006293,8.22e-08,6;UBERON:0002384,9.19e-08,46;UBERON:0003081,2.09e-07,87 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,4.26106967357202,1.83025338797167,0.936258105287974,0.513653904676515,0.717949430958028,3.0816131387617,4.37102012094987,2.6648780945253,2.83465374345756,0,13.4071420277251,13.0258711925452,12.7316895539409,0.340173160604279,5.85816612085223,3.6567970479451,1.59992422793407,2.06468352960453,0,0,0,0,0.504060259519861,0,0,0,0,0,0,0,136.441311620232,85.1655525530942,109.416462490524,148.822566471847,163.930916390027,141.283512732066,0,0,0,0.782391344348039,0,0.219686182734472,0,0.419959264876088,0,4.19456515144341,2.17608642603403,0.336093799142464,0,0,0,0.606949382578793,0,0,0.338844532069132,0,0.449949858640699,4.94433181283487,1.4209602298922,0.299600110518405,0,0.414758449233911,0,0,0.285650984403804,0.662605622854841,0,0,0,0,0.255374676170375,0.153606533256243,0.263772575460388,0.274462930807229,0.52091337055676,0.279182999001381,0.56276261003168,0.15279824777681,0.589257170947335,0.427115042397309,0.745597783301202,0,0.0755715601067855,0,0,0,0.539703191637817,0,0,1.96622188184453,0,0,0,0.563373679106722,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.5709193985953,16.8309624370662,0.148442139064825,0.346970653532272,0,0.691846491768175,0.301445281105245,0.23517741427141,0,0,0.433798070759735,27.4229271104461,2.26473589926373,6.40440403535141,3.87900202508178,0,0,0,0.766371165625774,3.95389910869537,6.59893004092748,3.55796635804581,0.149790639404823,0,0.251308704225729,0.173824320192276,0,0.41557608911912,0,0.203678727700633,7.58882520721567,0,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0.0680364991513279,0,0.281105173679186,0,0,0.567318240503458,0.703804496655795,0.219195732427575,0,0.348252166522167,0.205782136407943,0.199034266818493,2.1066395619397,6.69104558498259,8.80906848126337,0.207125772535502,0.469052119962192,0.36012412292203,0.710234206755631,0.196764231747404,0,0.697601834251224,0.268273401399619,0.233530684734339,0,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,0.210289948564127,0.102904612379284,0,0.264450566663544,0.639864751605702,0,0.38660238396628,0,0,0,0,0.164698954724011,0,0.198956472041151,0.38992817423824,0,0.216138049874694,0,0.379335801906163,0,0,0,0.387904974335251,0.140271639780637,0.0632365371242573,0,0,0,0,1.00107063429656,1.37591296579242,2.02375901146368,2.23146133527353,4.10001171579109,4.32863948028414,3.45235364940973,4.37765112292595,3.84385978463314,1.43768206527355,3.34926852901653,0.312037673114561,0,0,0,2.03228509183265,0.757965647081939,0.162964976442026,0.169745085775188,0,0.837531287209079,0.714130922658041,0.975668239288994,1.10344600874334,1.32878813789265,1.43509291791738,1.47476983244164,1.38147985492716,1.73578870297814,1.50791283939272,2.17562273527484,0,0.275936746304732,0,0.117211686592203,0.163934945376675,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0.325773918707152,0,2.65490276679926,0,0,0,1.18120757152309,0,0.516856586336442,0,0.356497378384721,0.316036757935816,0,2.06271086496374,0,0,0.776152102696527,0.428674070063185,0.177340233642274,0.356737635204141,0,0,0,0,0.220528398054962,0.32977250588296,0,0.120625849856312,0.119372344003136,0.328281799490123,0.291480836629851,0.18542530201051,10.423123728669,5.36605856704379,7.40778109478847,3.76736914009382,4.23752105935178,7.54967971581525,6.96911562974807,8.95689294871411,6.49539876880792,0.954670618015114,0.158167996790568,0.203319467126849,0.540026704109006,0.627264888043406,0.218362563746178,0.134864346384821,0.661227645802687,0,0.518459893167171,1.24267862617385,0.56369293868419,0,0,0.972255941720238,0.645799117388655,0,0.469428954583016,0.2604087696879,0.419437377702843,0.241584120826006,0,1.58005560314089,3.24360344464263,2.36235201479103,1.16928740680016,0.895133478337407,0.79472541912506,1.44234539423963,1.32920574457119,0.706765149637033,1.143102099825,0.705783295957884,1.94915761479505,1.15454209968395,1.16876902181569,0,0.443971906748129,0.358855426437903,0.167884616364078,0,0.563047426353546,0.183151624267265,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0.518936737920883,0,0.682934423016537,0.729320151204882,0.628839487883947,1.10306105070008,0.222246727801615,0.824140228955577,0.962757628775446,1.01078884705519,0.760437899670719,1.13175804831646,0.468207537349412,0.768301828858431,0.287177344778066,0,0.231768651889711,0.578727661391115,0,0.883193520806384,0,0.70990322463735,0.715308569841963,0.436039249896986,0.376437521661322,0.676916863133412,0.73171189149109,0,0.543216455383447,0,0.474540072496697,0.788035859004508,0,0.464810523557898,0.771626443924566,0.499621155875892,0.935726433781634,1.28922632428979,0.765153328275374,3.30887128679273,2.55054619182464 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,4.26106967357202,1.83025338797167,0.936258105287974,0.513653904676515,0.717949430958028,3.0816131387617,4.37102012094987,2.6648780945253,2.83465374345756,0,13.4071420277251,13.0258711925452,12.7316895539409,0.340173160604279,5.85816612085223,3.6567970479451,1.59992422793407,2.06468352960453,0,0,0,0,0.504060259519861,0,0,0,0,0,0,0,136.441311620232,85.1655525530942,109.416462490524,148.822566471847,163.930916390027,141.283512732066,0,0,0,0.782391344348039,0,0.219686182734472,0,0.419959264876088,0,4.19456515144341,2.17608642603403,0.336093799142464,0,0,0,0.606949382578793,0,0,0.338844532069132,0,0.449949858640699,4.94433181283487,1.4209602298922,0.299600110518405,0,0.414758449233911,0,0,0.285650984403804,0.662605622854841,0,0,0,0,0.255374676170375,0.153606533256243,0.263772575460388,0.274462930807229,0.52091337055676,0.279182999001381,0.56276261003168,0.15279824777681,0.589257170947335,0.427115042397309,0.745597783301202,0,0.0755715601067855,0,0,0,0.539703191637817,0,0,1.96622188184453,0,0,0,0.563373679106722,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.5709193985953,16.8309624370662,0.148442139064825,0.346970653532272,0,0.691846491768175,0.301445281105245,0.23517741427141,0,0,0.433798070759735,27.4229271104461,2.26473589926373,6.40440403535141,3.87900202508178,0,0,0,0.766371165625774,3.95389910869537,6.59893004092748,3.55796635804581,0.149790639404823,0,0.251308704225729,0.173824320192276,0,0.41557608911912,0,0.203678727700633,7.58882520721567,0,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0.0680364991513279,0,0.281105173679186,0,0,0.567318240503458,0.703804496655795,0.219195732427575,0,0.348252166522167,0.205782136407943,0.199034266818493,2.1066395619397,6.69104558498259,8.80906848126337,0.207125772535502,0.469052119962192,0.36012412292203,0.710234206755631,0.196764231747404,0,0.697601834251224,0.268273401399619,0.233530684734339,0,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,0.210289948564127,0.102904612379284,0,0.264450566663544,0.639864751605702,0,0.38660238396628,0,0,0,0,0.164698954724011,0,0.198956472041151,0.38992817423824,0,0.216138049874694,0,0.379335801906163,0,0,0,0.387904974335251,0.140271639780637,0.0632365371242573,0,0,0,0,1.00107063429656,1.37591296579242,2.02375901146368,2.23146133527353,4.10001171579109,4.32863948028414,3.45235364940973,4.37765112292595,3.84385978463314,1.43768206527355,3.34926852901653,0.312037673114561,0,0,0,2.03228509183265,0.757965647081939,0.162964976442026,0.169745085775188,0,0.837531287209079,0.714130922658041,0.975668239288994,1.10344600874334,1.32878813789265,1.43509291791738,1.47476983244164,1.38147985492716,1.73578870297814,1.50791283939272,2.17562273527484,0,0.275936746304732,0,0.117211686592203,0.163934945376675,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0.325773918707152,0,2.65490276679926,0,0,0,1.18120757152309,0,0.516856586336442,0,0.356497378384721,0.316036757935816,0,2.06271086496374,0,0,0.776152102696527,0.428674070063185,0.177340233642274,0.356737635204141,0,0,0,0,0.220528398054962,0.32977250588296,0,0.120625849856312,0.119372344003136,0.328281799490123,0.291480836629851,0.18542530201051,10.423123728669,5.36605856704379,7.40778109478847,3.76736914009382,4.23752105935178,7.54967971581525,6.96911562974807,8.95689294871411,6.49539876880792,0.954670618015114,0.158167996790568,0.203319467126849,0.540026704109006,0.627264888043406,0.218362563746178,0.134864346384821,0.661227645802687,0,0.518459893167171,1.24267862617385,0.56369293868419,0,0,0.972255941720238,0.645799117388655,0,0.469428954583016,0.2604087696879,0.419437377702843,0.241584120826006,0,1.58005560314089,3.24360344464263,2.36235201479103,1.16928740680016,0.895133478337407,0.79472541912506,1.44234539423963,1.32920574457119,0.706765149637033,1.143102099825,0.705783295957884,1.94915761479505,1.15454209968395,1.16876902181569,0,0.443971906748129,0.358855426437903,0.167884616364078,0,0.563047426353546,0.183151624267265,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0.518936737920883,0,0.682934423016537,0.729320151204882,0.628839487883947,1.10306105070008,0.222246727801615,0.824140228955577,0.962757628775446,1.01078884705519,0.760437899670719,1.13175804831646,0.468207537349412,0.768301828858431,0.287177344778066,0,0.231768651889711,0.578727661391115,0,0.883193520806384,0,0.70990322463735,0.715308569841963,0.436039249896986,0.376437521661322,0.676916863133412,0.73171189149109,0,0.543216455383447,0,0.474540072496697,0.788035859004508,0,0.464810523557898,0.771626443924566,0.499621155875892,0.935726433781634,1.28922632428979,0.765153328275374,3.30887128679273,2.55054619182464 | ||
|short_description=p3@Rgs19 | |||
}} | }} |
Latest revision as of 08:21, 26 September 2015
Short description: | p3@Rgs19 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Rgs19_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 40bp_to_ENSMUST00000143510_5end |
EntrezGene: | Rgs19 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.86e-11 | 32 |
hematopoietic oligopotent progenitor cell | 1.86e-11 | 32 |
hematopoietic stem cell | 1.86e-11 | 32 |
hematopoietic multipotent progenitor cell | 1.86e-11 | 32 |
common myeloid progenitor | 3.26e-08 | 19 |
connective tissue cell | 9.19e-08 | 46 |
mesenchymal cell | 9.19e-08 | 46 |
hematopoietic lineage restricted progenitor cell | 2.96e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.36e-18 | 48 |
immune system | 2.36e-18 | 48 |
hematopoietic system | 5.94e-16 | 45 |
blood island | 5.94e-16 | 45 |
bone element | 1.38e-10 | 22 |
skeletal element | 1.38e-10 | 22 |
skeletal system | 1.38e-10 | 22 |
musculoskeletal system | 1.57e-09 | 32 |
hemopoietic organ | 1.19e-08 | 29 |
immune organ | 1.19e-08 | 29 |
foregut | 1.21e-08 | 80 |
bone marrow | 1.79e-08 | 16 |
spleen | 8.22e-08 | 6 |
cavity lining | 8.22e-08 | 6 |
serous membrane | 8.22e-08 | 6 |
gastrointestinal system mesentery | 8.22e-08 | 6 |
stomach region | 8.22e-08 | 6 |
mesentery | 8.22e-08 | 6 |
gastrointestinal system serosa | 8.22e-08 | 6 |
mesentery of stomach | 8.22e-08 | 6 |
gut mesentery | 8.22e-08 | 6 |
dorsal mesentery | 8.22e-08 | 6 |
dorsal mesogastrium | 8.22e-08 | 6 |
peritoneal cavity | 8.22e-08 | 6 |
spleen primordium | 8.22e-08 | 6 |
connective tissue | 9.19e-08 | 46 |
lateral plate mesoderm | 2.09e-07 | 87 |