Personal tools

FFCP PHASE1:Mm9::chr17:34767834..34767884,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=260297
|EntrezGene=260297
|HGNC=
|HGNC=
|MCL_coexpression_id=1246
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-464bp_to_ENSMUST00000172945_5end
|association_with_transcript=-464bp_to_ENSMUST00000172945_5end
|cluster_id=chr17:34767834..34767884,+
|description=CAGE_peak_5_at_Prrt1_5end
|description=CAGE_peak_5_at_Prrt1_5end
|id=chr17:34767834..34767884,+
|id=chr17:34767834..34767884,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007811!1.65e-17!86;UBERON:0000153!1.41e-15!94;UBERON:0001049!3.39e-13!52;UBERON:0005068!3.39e-13!52;UBERON:0006241!3.39e-13!52;UBERON:0007135!3.39e-13!52;UBERON:0001017!1.01e-12!73;UBERON:0005743!1.01e-12!73;UBERON:0000955!1.50e-12!50;UBERON:0006238!1.50e-12!50;UBERON:0002616!6.14e-12!49;UBERON:0000073!6.50e-12!75;UBERON:0001016!6.50e-12!75;UBERON:0000033!1.14e-11!63;UBERON:0002020!1.71e-11!34;UBERON:0002346!1.51e-10!71;UBERON:0003075!1.51e-10!71;UBERON:0007284!1.51e-10!71;UBERON:0004121!2.63e-10!102;UBERON:0000924!2.63e-10!102;UBERON:0006601!2.63e-10!102;UBERON:0000064!4.09e-09!99;UBERON:0002791!4.91e-09!29;UBERON:0003528!4.91e-09!29;UBERON:0001893!4.91e-09!29;UBERON:0002021!7.14e-09!10;UBERON:0000411!7.14e-09!10;UBERON:0001950!7.14e-09!10;UBERON:0003080!7.86e-09!40;UBERON:0003056!1.25e-08!49;UBERON:0002780!2.57e-08!39;UBERON:0001890!2.57e-08!39;UBERON:0006240!2.57e-08!39;UBERON:0002619!1.18e-07!17;UBERON:0000477!4.58e-07!154
|ontology_enrichment_uberon_v019_2=UBERON:0002021,7.29e-19,10;UBERON:0000411,7.29e-19,10;UBERON:0001950,7.29e-19,10;UBERON:0000955,1.76e-18,47;UBERON:0006238,1.76e-18,47;UBERON:0000073,2.05e-18,54;UBERON:0002616,3.17e-17,46;UBERON:0001049,4.41e-16,52;UBERON:0005068,4.41e-16,52;UBERON:0006241,4.41e-16,52;UBERON:0007135,4.41e-16,52;UBERON:0003528,1.04e-15,29;UBERON:0002791,1.04e-15,29;UBERON:0001893,1.04e-15,29;UBERON:0001017,1.17e-15,73;UBERON:0001016,4.71e-15,75;UBERON:0003080,1.16e-14,40;UBERON:0002619,1.22e-14,17;UBERON:0002370,1.03e-13,23;UBERON:0000974,1.03e-13,23;UBERON:0004807,1.03e-13,23;UBERON:0005058,1.03e-13,23;UBERON:0003351,1.03e-13,23;UBERON:0009113,1.03e-13,23;UBERON:0003295,1.03e-13,23;UBERON:0009722,1.03e-13,23;UBERON:0005562,1.03e-13,23;UBERON:0007690,1.03e-13,23;UBERON:0002780,1.47e-13,39;UBERON:0001890,1.47e-13,39;UBERON:0006240,1.47e-13,39;UBERON:0000956,2.03e-13,21;UBERON:0001869,2.03e-13,21;UBERON:0000203,2.03e-13,21;UBERON:0006562,5.25e-13,24;UBERON:0003408,5.25e-13,24;UBERON:0001557,5.25e-13,24;UBERON:0001042,5.25e-13,24;UBERON:0008814,5.25e-13,24;UBERON:0009145,5.25e-13,24;UBERON:0002020,8.69e-13,34;UBERON:0002346,5.87e-12,64;UBERON:0003075,5.87e-12,64;UBERON:0007284,5.87e-12,64;UBERON:0000072,3.38e-11,27;UBERON:0003056,4.47e-11,49;UBERON:0011216,1.38e-10,194;UBERON:0004121,2.02e-10,95;UBERON:0000924,2.02e-10,95;UBERON:0006601,2.02e-10,95;UBERON:0004177,3.34e-10,29;UBERON:0005057,3.34e-10,29;UBERON:0010371,9.00e-10,73;UBERON:0000483,1.76e-09,174;UBERON:0000119,2.86e-09,176;UBERON:0000077,6.49e-08,35;UBERON:0007811,1.31e-07,36;UBERON:0002950,2.72e-07,4;UBERON:0001891,2.72e-07,4;UBERON:0009616,2.72e-07,4;UBERON:0010286,2.72e-07,4
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0.202475267389826,0,0.315462165358238,0,0,0.765389611359628,0.595745707205312,0.261199789138935,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0.219686182734472,0,0,0,0,0,0.336093799142464,0,0,0,0.606949382578793,1.5869729378161,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0.571301968807607,0.883474163806454,0,0.383381884072945,0,1.10115880999389,2.17068474744819,4.30098293117482,0.527545150920775,0.182975287204819,0,1.11673199600552,2.25105044012672,1.98637722109853,0.883885756421003,0.996601765593721,0.931997229126503,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0.148442139064825,0,0.304465478312141,0,0,0,0.125666591329675,0,0,0,0,0,0,0,12.8823550685081,16.3368431314495,0.255457055208591,0.239630249011841,0,0,1.9472783122627,3.66000482254901,0.879580464790051,2.60736480288415,3.58001640262463,2.28566849015516,1.29793010454206,0.101839363850316,0.124406970610093,3.28539585963777,0.420883711772948,0,0,0,0,0.136072998302656,0.512454881139399,0.281105173679186,0.776110112217047,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0.292399974850665,0.219550115291051,0,3.36463917702604,1.13195073617213,0.330418782983798,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0.203651327845314,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0.179397413521912,0,0,0,0,0,0,0.167506257441816,0,0,0,0.221464689648775,0,0.327726629431476,0.345369963731791,0.144649058581512,0,0,0,0,1.60550589987792,0.820481806145422,0,0,0,0,0,0,0,0,0,0.584511715822624,0.790575555893047,2.57057053137446,0.141940085208269,0,0,0.989820737835213,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0.340439605753788,0,0,0,0.177340233642274,0.356737635204141,0,0,0,0,0.220528398054962,0.32977250588296,0,0.361877549568935,0,0.984845398470368,0,2.22510362412612,0.512612642393558,0.206386867963223,0,0,0,0,0.849892149969277,0.979660166265606,0.414599921413271,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0.523511883968059,0.129614973291793,0,0,0,0,0,0,0,0,0,0.104859344425711,0.241584120826006,0,8.53230025696081,0.608175645870493,2.56777392912068,2.46849563657811,5.54982756569192,8.34461690081313,4.92801343031872,6.20296014133224,6.15895344683701,7.01102621225999,7.56196388526304,7.21188317474168,8.56285390598932,6.778860326531,0,0,0,0,0,0.375364950902364,0.183151624267265,0,0.501572104035363,3.95326289831947,3.68260189205742,5.15605962095457,2.57779773515531,2.05524755931193,5.2877572817279,2.02506750069542,4.05289082901798,3.62513927187364,5.1776031175182,0,0.399024873401031,0,0,0,0,0,0,0,0,0.25347929989024,0.188626341386076,0.0936415074698824,0,0.114870937911227,0,0.115884325944855,0,0,0,0.685738504770831,0,0.476872379894642,0,0.0941093804153306,0.0846146078916765,0,0,0.271608227691724,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0.578719832943424,0,0.233931608445408,0.644613162144895,0.191288332068843,0,0.231867835620421
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0.202475267389826,0,0.315462165358238,0,0,0.765389611359628,0.595745707205312,0.261199789138935,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0.219686182734472,0,0,0,0,0,0.336093799142464,0,0,0,0.606949382578793,1.5869729378161,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0.571301968807607,0.883474163806454,0,0.383381884072945,0,1.10115880999389,2.17068474744819,4.30098293117482,0.527545150920775,0.182975287204819,0,1.11673199600552,2.25105044012672,1.98637722109853,0.883885756421003,0.996601765593721,0.931997229126503,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0.148442139064825,0,0.304465478312141,0,0,0,0.125666591329675,0,0,0,0,0,0,0,12.8823550685081,16.3368431314495,0.255457055208591,0.239630249011841,0,0,1.9472783122627,3.66000482254901,0.879580464790051,2.60736480288415,3.58001640262463,2.28566849015516,1.29793010454206,0.101839363850316,0.124406970610093,3.28539585963777,0.420883711772948,0,0,0,0,0.136072998302656,0.512454881139399,0.281105173679186,0.776110112217047,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0.292399974850665,0.219550115291051,0,3.36463917702604,1.13195073617213,0.330418782983798,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0.203651327845314,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0.179397413521912,0,0,0,0,0,0,0.167506257441816,0,0,0,0.221464689648775,0,0.327726629431476,0.345369963731791,0.144649058581512,0,0,0,0,1.60550589987792,0.820481806145422,0,0,0,0,0,0,0,0,0,0.584511715822624,0.790575555893047,2.57057053137446,0.141940085208269,0,0,0.989820737835213,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0.340439605753788,0,0,0,0.177340233642274,0.356737635204141,0,0,0,0,0.220528398054962,0.32977250588296,0,0.361877549568935,0,0.984845398470368,0,2.22510362412612,0.512612642393558,0.206386867963223,0,0,0,0,0.849892149969277,0.979660166265606,0.414599921413271,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0.523511883968059,0.129614973291793,0,0,0,0,0,0,0,0,0,0.104859344425711,0.241584120826006,0,8.53230025696081,0.608175645870493,2.56777392912068,2.46849563657811,5.54982756569192,8.34461690081313,4.92801343031872,6.20296014133224,6.15895344683701,7.01102621225999,7.56196388526304,7.21188317474168,8.56285390598932,6.778860326531,0,0,0,0,0,0.375364950902364,0.183151624267265,0,0.501572104035363,3.95326289831947,3.68260189205742,5.15605962095457,2.57779773515531,2.05524755931193,5.2877572817279,2.02506750069542,4.05289082901798,3.62513927187364,5.1776031175182,0,0.399024873401031,0,0,0,0,0,0,0,0,0.25347929989024,0.188626341386076,0.0936415074698824,0,0.114870937911227,0,0.115884325944855,0,0,0,0.685738504770831,0,0.476872379894642,0,0.0941093804153306,0.0846146078916765,0,0,0.271608227691724,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0.578719832943424,0,0.233931608445408,0.644613162144895,0.191288332068843,0,0.231867835620421
|short_description=p5@Prrt1
|short_description=p5@Prrt1
}}
}}

Latest revision as of 08:35, 26 September 2015

Short description:p5@Prrt1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Prrt1_5end
Coexpression cluster:MCL_coexpression_mm9:1246
Association with transcript: -464bp_to_ENSMUST00000172945_5end
EntrezGene:Prrt1
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0
5
10
15
20




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data