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FFCP PHASE1:Mm9::chr17:36179901..36179929,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=547347
|EntrezGene=547347
|HGNC=
|HGNC=
|MCL_coexpression_id=1967
|TSSclassifier=NA
|UniProt=E9Q101,Q3U0J4
|UniProt=E9Q101,Q3U0J4
|association_with_transcript=0bp_to_ENSMUST00000097331,NM_001034909,uc008cjy.1_5end
|association_with_transcript=0bp_to_ENSMUST00000097331,NM_001034909,uc008cjy.1_5end
|cluster_id=chr17:36179901..36179929,+
|description=CAGE_peak_1_at_Gm6034_5end
|description=CAGE_peak_1_at_Gm6034_5end
|id=chr17:36179901..36179929,+
|id=chr17:36179901..36179929,+
|ontology_enrichment_celltype=CL:0000838!7.79e-09!12;CL:0000988!9.44e-09!32;CL:0002032!9.44e-09!32;CL:0000037!9.44e-09!32;CL:0000566!9.44e-09!32;CL:0000837!9.44e-09!32;CL:0000084!2.52e-08!11;CL:0000827!2.52e-08!11;CL:0002031!3.49e-08!25;CL:0000791!5.26e-08!9;CL:0000789!5.26e-08!9;CL:0002420!5.26e-08!9;CL:0002419!5.26e-08!9;CL:0000790!5.26e-08!9;CL:0000542!8.77e-08!13;CL:0000051!8.77e-08!13;CL:0000738!1.44e-07!17;CL:0002087!1.44e-07!17;CL:0000624!3.64e-07!8
|ontology_enrichment_celltype=CL:0000838!7.79e-09!12;CL:0000988!9.44e-09!32;CL:0002032!9.44e-09!32;CL:0000037!9.44e-09!32;CL:0000566!9.44e-09!32;CL:0000837!9.44e-09!32;CL:0000084!2.52e-08!11;CL:0000827!2.52e-08!11;CL:0002031!3.49e-08!25;CL:0000791!5.26e-08!9;CL:0000789!5.26e-08!9;CL:0002420!5.26e-08!9;CL:0002419!5.26e-08!9;CL:0000790!5.26e-08!9;CL:0000542!8.77e-08!13;CL:0000051!8.77e-08!13;CL:0000738!1.44e-07!17;CL:0002087!1.44e-07!17;CL:0000624!3.64e-07!8
|ontology_enrichment_celltype_v019_2=CL:0000791,2.44e-23,9;CL:0000789,2.44e-23,9;CL:0002420,2.44e-23,9;CL:0002419,2.44e-23,9;CL:0000790,2.44e-23,9;CL:0002031,2.86e-20,25;CL:0000624,3.22e-20,8;CL:0000084,7.22e-19,11;CL:0000827,7.22e-19,11;CL:0000738,2.32e-18,17;CL:0002087,2.32e-18,17;CL:0000838,3.43e-17,12;CL:0000542,9.03e-16,13;CL:0000051,9.03e-16,13;CL:0000988,2.93e-15,32;CL:0002032,2.93e-15,32;CL:0000037,2.93e-15,32;CL:0000837,2.93e-15,32;CL:0000893,7.08e-14,6;CL:0002489,7.08e-14,6;CL:0000898,7.08e-14,6;CL:0000809,7.08e-14,6;CL:0000810,7.08e-14,6;CL:0000895,7.08e-14,6;CL:0000808,7.08e-14,6;CL:0000894,7.08e-14,6;CL:0000806,7.08e-14,6;CL:0000807,7.08e-14,6;CL:0000805,7.08e-14,6;CL:0002425,7.08e-14,6;CL:0002436,7.08e-14,6;CL:0002427,7.08e-14,6;CL:0002428,7.08e-14,6;CL:0002429,7.08e-14,6;CL:0002433,7.08e-14,6;CL:0002431,7.08e-14,6;CL:0002432,7.08e-14,6;CL:0002320,8.09e-10,46;CL:0000134,8.09e-10,46;CL:0000219,5.55e-08,54;CL:0002476,1.25e-07,2
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!2.86e-10!48;UBERON:0002390!1.28e-09!45;UBERON:0003061!1.28e-09!45;UBERON:0001007!1.36e-08!128;UBERON:0001555!1.36e-08!128;UBERON:0007026!1.36e-08!128;UBERON:0004921!1.81e-08!126;UBERON:0004185!1.81e-08!126;UBERON:0002405!1.89e-08!70;UBERON:0004119!3.89e-08!130;UBERON:0000925!3.89e-08!130;UBERON:0006595!3.89e-08!130;UBERON:0004177!8.42e-08!29;UBERON:0005911!6.64e-07!69;UBERON:0002370!9.96e-07!23;UBERON:0000974!9.96e-07!23;UBERON:0004807!9.96e-07!23;UBERON:0005058!9.96e-07!23;UBERON:0003351!9.96e-07!23;UBERON:0009113!9.96e-07!23;UBERON:0003295!9.96e-07!23;UBERON:0009722!9.96e-07!23;UBERON:0005562!9.96e-07!23;UBERON:0007690!9.96e-07!23
|ontology_enrichment_uberon=UBERON:0002193!2.86e-10!48;UBERON:0002390!1.28e-09!45;UBERON:0003061!1.28e-09!45;UBERON:0001007!1.36e-08!128;UBERON:0001555!1.36e-08!128;UBERON:0007026!1.36e-08!128;UBERON:0004921!1.81e-08!126;UBERON:0004185!1.81e-08!126;UBERON:0002405!1.89e-08!70;UBERON:0004119!3.89e-08!130;UBERON:0000925!3.89e-08!130;UBERON:0006595!3.89e-08!130;UBERON:0004177!8.42e-08!29;UBERON:0005911!6.64e-07!69;UBERON:0002370!9.96e-07!23;UBERON:0000974!9.96e-07!23;UBERON:0004807!9.96e-07!23;UBERON:0005058!9.96e-07!23;UBERON:0003351!9.96e-07!23;UBERON:0009113!9.96e-07!23;UBERON:0003295!9.96e-07!23;UBERON:0009722!9.96e-07!23;UBERON:0005562!9.96e-07!23;UBERON:0007690!9.96e-07!23
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.39e-10,48;UBERON:0002405,1.39e-10,48;UBERON:0002384,8.09e-10,46;UBERON:0002390,1.16e-09,45;UBERON:0003061,1.16e-09,45
|phase1_expression=0.320297694209588,0.348975407639361,0,2.11724947914781,0.500895729946347,0.671517087647559,0,7.87652272993615,2.39340827657833,9.12851652655775,0.171217968225505,1.67521533890206,1.19840510951844,4.80812213304486,0.333109761815663,0.404950534779652,0,1.57731082679119,1.64537320326887,2.12194825899015,1.19060606211498,0.0992909512008853,0.783599367416806,0.639969691173627,0,0,0,0.215471232685889,0.570070258369122,0.504060259519861,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0,0.418531630736908,0,0.523523743973798,0,0,0,0.377690453926732,1.01376931219515,0.183546752161682,0,0,0,0,0,0,0.671130424230945,5.07753499407941,3.02484419228218,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0.860423876981386,0,0,0,0,0.842666520790511,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0.505524445014783,1.1418387971906,7.25026074212081,0.742210695324124,0,0,0,0,0,0,0,1.01219549843938,0,0,0,0,1.86391761218122,0,0,0.510914110417183,0.359445373517761,0.599902730993408,0.254140454146129,0,0,0,0.173824320192276,0,0.20778804455956,0,0,0.870848794270651,0.252722758433675,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.162137619091711,0.146199987425332,0.439100230582101,0.805238512562231,0,0,2.97376904685418,0.264450566663544,0,0,0.128867461322093,0,0.22237804384487,0,1.42358718463353,0.164698954724011,0.251335208800269,0,0.58489226135736,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0,0.147610147979602,0.470996183524124,0.493588655687202,0,0,0,0,0,0,0,0,0.162135226775035,0.549122826376163,0,0.372140947668503,0.624075346229121,0.757736633841335,0.358794827043824,0.482443521363367,0.923765950833023,0,0,0.169745085775188,0,0,0,0.195133647857799,0.315270288212382,0.221464689648775,0.318909537314974,0.81931657357869,1.20879487306127,0.578596234326046,1.50791283939272,6.52686820582452,0.491764273019036,0.827810238914197,0.160550589987792,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0.292255857911312,0,0,0.141940085208269,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0.516856586336442,0.363533729477506,0,0,0,0,0.680879211507576,0,0,0,0.177340233642274,0,0,0,0,0,0.220528398054962,0.65954501176592,0,0.0603129249281559,0,0,0.291480836629851,0,1.53783792718067,0.206386867963223,0,0.188368457004691,0.410082683163076,0.457556346413045,2.20971958992012,0.979660166265606,2.62579950228405,0,0,0,0.108005340821801,0,0,0.134864346384821,0.247960367176008,0.26175594198403,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,1.26404448251271,0.202725215290164,0,0.129920822977795,0,0.198681354781265,0.721172697119813,0.738447635872886,0.807731599585181,0.381034033274999,0.504130925684203,0.974578807397524,0.962118416403295,1.05189211963412,0,0,0,0,0.386379188064381,0.750729901804728,0.73260649706906,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0,0.147198920134397,0,0,0.238436189947321,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0.429742108096597,0,0,0
|phase1_expression=0.320297694209588,0.348975407639361,0,2.11724947914781,0.500895729946347,0.671517087647559,0,7.87652272993615,2.39340827657833,9.12851652655775,0.171217968225505,1.67521533890206,1.19840510951844,4.80812213304486,0.333109761815663,0.404950534779652,0,1.57731082679119,1.64537320326887,2.12194825899015,1.19060606211498,0.0992909512008853,0.783599367416806,0.639969691173627,0,0,0,0.215471232685889,0.570070258369122,0.504060259519861,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0,0.418531630736908,0,0.523523743973798,0,0,0,0.377690453926732,1.01376931219515,0.183546752161682,0,0,0,0,0,0,0.671130424230945,5.07753499407941,3.02484419228218,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0.860423876981386,0,0,0,0,0.842666520790511,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0.505524445014783,1.1418387971906,7.25026074212081,0.742210695324124,0,0,0,0,0,0,0,1.01219549843938,0,0,0,0,1.86391761218122,0,0,0.510914110417183,0.359445373517761,0.599902730993408,0.254140454146129,0,0,0,0.173824320192276,0,0.20778804455956,0,0,0.870848794270651,0.252722758433675,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.162137619091711,0.146199987425332,0.439100230582101,0.805238512562231,0,0,2.97376904685418,0.264450566663544,0,0,0.128867461322093,0,0.22237804384487,0,1.42358718463353,0.164698954724011,0.251335208800269,0,0.58489226135736,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0,0.147610147979602,0.470996183524124,0.493588655687202,0,0,0,0,0,0,0,0,0.162135226775035,0.549122826376163,0,0.372140947668503,0.624075346229121,0.757736633841335,0.358794827043824,0.482443521363367,0.923765950833023,0,0,0.169745085775188,0,0,0,0.195133647857799,0.315270288212382,0.221464689648775,0.318909537314974,0.81931657357869,1.20879487306127,0.578596234326046,1.50791283939272,6.52686820582452,0.491764273019036,0.827810238914197,0.160550589987792,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0.292255857911312,0,0,0.141940085208269,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0.516856586336442,0.363533729477506,0,0,0,0,0.680879211507576,0,0,0,0.177340233642274,0,0,0,0,0,0.220528398054962,0.65954501176592,0,0.0603129249281559,0,0,0.291480836629851,0,1.53783792718067,0.206386867963223,0,0.188368457004691,0.410082683163076,0.457556346413045,2.20971958992012,0.979660166265606,2.62579950228405,0,0,0,0.108005340821801,0,0,0.134864346384821,0.247960367176008,0.26175594198403,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,1.26404448251271,0.202725215290164,0,0.129920822977795,0,0.198681354781265,0.721172697119813,0.738447635872886,0.807731599585181,0.381034033274999,0.504130925684203,0.974578807397524,0.962118416403295,1.05189211963412,0,0,0,0,0.386379188064381,0.750729901804728,0.73260649706906,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0,0.147198920134397,0,0,0.238436189947321,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0.429742108096597,0,0,0
|short_description=p1@Gm6034
|short_description=p1@Gm6034
}}
}}

Latest revision as of 11:08, 26 September 2015

Short description:p1@Gm6034
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gm6034_5end
Coexpression cluster:MCL_coexpression_mm9:1967
Association with transcript: 0bp_to_ENSMUST00000097331, NM_001034909, uc008cjy.1_5end
EntrezGene:Gm6034
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gm6034

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.12
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E97.88
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F29.13
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.68
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.20
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.81
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.58
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.65
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.01
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.08
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H97.25
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I32.97
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A16.53
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G21.54
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.21
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.98
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.63
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.81
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A20.97
thymus, neonate N25.CNhs11125.1362-25G70.96
thymus, neonate N30.CNhs11132.1393-42G21.05
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell2.44e-239
alpha-beta T cell2.44e-239
immature T cell2.44e-239
mature T cell2.44e-239
immature alpha-beta T cell2.44e-239
hematopoietic lineage restricted progenitor cell2.86e-2025
CD4-positive, alpha-beta T cell3.22e-208
T cell7.22e-1911
pro-T cell7.22e-1911
leukocyte2.32e-1817
nongranular leukocyte2.32e-1817
lymphoid lineage restricted progenitor cell3.43e-1712
lymphocyte9.03e-1613
common lymphoid progenitor9.03e-1613
hematopoietic cell2.93e-1532
hematopoietic oligopotent progenitor cell2.93e-1532
hematopoietic stem cell2.93e-1532
hematopoietic multipotent progenitor cell2.93e-1532
thymocyte7.08e-146
double negative thymocyte7.08e-146
naive T cell7.08e-146
double-positive, alpha-beta thymocyte7.08e-146
CD4-positive, alpha-beta thymocyte7.08e-146
naive thymus-derived CD4-positive, alpha-beta T cell7.08e-146
DN4 thymocyte7.08e-146
DN1 thymic pro-T cell7.08e-146
DN2 thymocyte7.08e-146
DN3 thymocyte7.08e-146
immature single positive thymocyte7.08e-146
early T lineage precursor7.08e-146
mature CD4 single-positive thymocyte7.08e-146
resting double-positive thymocyte7.08e-146
double-positive blast7.08e-146
CD69-positive double-positive thymocyte7.08e-146
CD69-positive, CD4-positive single-positive thymocyte7.08e-146
CD4-positive, CD8-intermediate double-positive thymocyte7.08e-146
CD24-positive, CD4 single-positive thymocyte7.08e-146
connective tissue cell8.09e-1046
mesenchymal cell8.09e-1046
motile cell5.55e-0854
bone marrow macrophage1.25e-072

Uber anatomy
Ontology termp-valuen
hemolymphoid system1.39e-1048
immune system1.39e-1048
connective tissue8.09e-1046
hematopoietic system1.16e-0945
blood island1.16e-0945
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