FFCP PHASE1:Mm9::chr15:102767247..102767265,+: Difference between revisions
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{{FFCP|EntrezGene=15421|HGNC=|MCL_coexpression_id=1653|UniProt=Q8K5B8|association_with_transcript=-18bp_to_NM_010463,uc007xww.1_5end|description=CAGE_peak_1_at_Hoxc12_5end|id=chr15:102767247..102767265,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002612,5.72e-11,3;CL:0002611,1.91e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002240!3.27e-10!6;UBERON:0005174!3.27e-10!6;UBERON:0001137!3.27e-10!6;UBERON:0002102!1.88e-09!8;UBERON:0004710!1.88e-09!8;UBERON:0005419!1.88e-09!8;UBERON:0005417!1.88e-09!8;UBERON:0005729!1.88e-09!8;UBERON:0001948!6.45e-09!5;UBERON:0002315!6.45e-09!5;UBERON:0003102!7.56e-08!23|ontology_enrichment_uberon_v019_2=UBERON:0002102,3.69e-21,7;UBERON:0004710,3.69e-21,7;UBERON:0005419,3.69e-21,7;UBERON:0005417,3.69e-21,7;UBERON:0005729,3.69e-21,7;UBERON:0002240,1.90e-19,6;UBERON:0005174,1.90e-19,6;UBERON:0001137,1.90e-19,6;UBERON:0010708,2.13e-18,8;UBERON:0001948,9.02e-17,5;UBERON:0002315,9.02e-17,5;UBERON:0003102,5.05e-12,22;UBERON:0000026,6.03e-12,12;UBERON:0004708,6.03e-12,12;UBERON:0002101,6.03e-12,12;UBERON:0004357,6.03e-12,12;UBERON:0004347,6.03e-12,12;UBERON:0005732,6.03e-12,12;UBERON:0005733,6.03e-12,12;UBERON:0002257,5.72e-11,3;UBERON:0010707,5.94e-11,13;UBERON:0003076,2.23e-09,12;UBERON:0003057,2.23e-09,12;UBERON:0002256,1.91e-07,2|phase1_expression=0,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3498495759221,0,2.1314403448383,0,0,0,0,0,9.14083150092171,1.98781686856452,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,13.8475435172624,22.7794689278565,18.2671456908795,0,0,0,0,0,0.539703191637817,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5089759505299,1.89106080167819,2.46331573829528,2.6303487891309,3.61461423993277,3.48252166522167,1.23469281844766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0.322928853391811,1.5078231232039,1.07435109602823,1.47726809770555,0,1.66882771809459,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0.167884616364078,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,1.24544817101012,1.99512436700516,2.39027048055788,1.45864030240976,1.46729213839588,1.83843508450014,0,0.618105171716683,0.64183841918363,0.758091635291392,0.50695859978048,0.377252682772152,0.936415074698824,0.768301828858431,0.689225627467359,1.42888107384922,0.695305955669133,0.77163688185482,0.824171801606613,0.588795680537589,0.342869252385415,0.70990322463735,0.476872379894642,0.726732083161643,0.752875043322645,0.592302255241736,1.09756783723664,0.526139422875686,0.407412341537585,0.561142271657738,0.593175090620871,0.492522411877817,0,0.619747364743864,0.771626443924566,0,0.935726433781634,1.50409737833809,2.48674831689496,1.54413993383661,1.39120701372253|short_description=p1@Hoxc12}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=15421 | |||
|HGNC= | |||
|MCL_coexpression_id=1653 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K5B8 | |||
|association_with_transcript=-18bp_to_NM_010463,uc007xww.1_5end | |||
|cluster_id=chr15:102767247..102767265,+ | |||
|description=CAGE_peak_1_at_Hoxc12_5end | |||
|id=chr15:102767247..102767265,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002612,5.72e-11,3;CL:0002611,1.91e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002240!3.27e-10!6;UBERON:0005174!3.27e-10!6;UBERON:0001137!3.27e-10!6;UBERON:0002102!1.88e-09!8;UBERON:0004710!1.88e-09!8;UBERON:0005419!1.88e-09!8;UBERON:0005417!1.88e-09!8;UBERON:0005729!1.88e-09!8;UBERON:0001948!6.45e-09!5;UBERON:0002315!6.45e-09!5;UBERON:0003102!7.56e-08!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002102,3.69e-21,7;UBERON:0004710,3.69e-21,7;UBERON:0005419,3.69e-21,7;UBERON:0005417,3.69e-21,7;UBERON:0005729,3.69e-21,7;UBERON:0002240,1.90e-19,6;UBERON:0005174,1.90e-19,6;UBERON:0001137,1.90e-19,6;UBERON:0010708,2.13e-18,8;UBERON:0001948,9.02e-17,5;UBERON:0002315,9.02e-17,5;UBERON:0003102,5.05e-12,22;UBERON:0000026,6.03e-12,12;UBERON:0004708,6.03e-12,12;UBERON:0002101,6.03e-12,12;UBERON:0004357,6.03e-12,12;UBERON:0004347,6.03e-12,12;UBERON:0005732,6.03e-12,12;UBERON:0005733,6.03e-12,12;UBERON:0002257,5.72e-11,3;UBERON:0010707,5.94e-11,13;UBERON:0003076,2.23e-09,12;UBERON:0003057,2.23e-09,12;UBERON:0002256,1.91e-07,2 | |||
|phase1_expression=0,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3498495759221,0,2.1314403448383,0,0,0,0,0,9.14083150092171,1.98781686856452,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,13.8475435172624,22.7794689278565,18.2671456908795,0,0,0,0,0,0.539703191637817,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5089759505299,1.89106080167819,2.46331573829528,2.6303487891309,3.61461423993277,3.48252166522167,1.23469281844766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0.322928853391811,1.5078231232039,1.07435109602823,1.47726809770555,0,1.66882771809459,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0.167884616364078,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,1.24544817101012,1.99512436700516,2.39027048055788,1.45864030240976,1.46729213839588,1.83843508450014,0,0.618105171716683,0.64183841918363,0.758091635291392,0.50695859978048,0.377252682772152,0.936415074698824,0.768301828858431,0.689225627467359,1.42888107384922,0.695305955669133,0.77163688185482,0.824171801606613,0.588795680537589,0.342869252385415,0.70990322463735,0.476872379894642,0.726732083161643,0.752875043322645,0.592302255241736,1.09756783723664,0.526139422875686,0.407412341537585,0.561142271657738,0.593175090620871,0.492522411877817,0,0.619747364743864,0.771626443924566,0,0.935726433781634,1.50409737833809,2.48674831689496,1.54413993383661,1.39120701372253 | |||
|short_description=p1@Hoxc12 | |||
}} |
Latest revision as of 14:42, 26 September 2015
Short description: | p1@Hoxc12 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Hoxc12_5end |
Coexpression cluster: | MCL_coexpression_mm9:1653 |
Association with transcript: | -18bp_to_NM_010463, uc007xww.1_5end |
EntrezGene: | Hoxc12 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 5.72e-11 | 3 |
neuron of the dorsal spinal cord | 1.91e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
forelimb | 3.69e-21 | 7 |
pectoral appendage | 3.69e-21 | 7 |
pectoral appendage bud | 3.69e-21 | 7 |
forelimb bud | 3.69e-21 | 7 |
forelimb/pectoral fin field | 3.69e-21 | 7 |
spinal cord | 1.90e-19 | 6 |
dorsal region element | 1.90e-19 | 6 |
dorsum | 1.90e-19 | 6 |
pectoral complex | 2.13e-18 | 8 |
regional part of spinal cord | 9.02e-17 | 5 |
gray matter of spinal cord | 9.02e-17 | 5 |
surface structure | 5.05e-12 | 22 |
appendage | 6.03e-12 | 12 |
paired limb/fin | 6.03e-12 | 12 |
limb | 6.03e-12 | 12 |
paired limb/fin bud | 6.03e-12 | 12 |
limb bud | 6.03e-12 | 12 |
limb/fin field | 6.03e-12 | 12 |
limb field | 6.03e-12 | 12 |
ventral horn of spinal cord | 5.72e-11 | 3 |
appendage girdle complex | 5.94e-11 | 13 |
posterior neural tube | 2.23e-09 | 12 |
chordal neural plate | 2.23e-09 | 12 |
dorsal horn of spinal cord | 1.91e-07 | 2 |