FFCP PHASE1:Mm9::chr10:94407469..94407496,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=54712 | |EntrezGene=54712 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=137 | |MCL_coexpression_id=137 | ||
|TSSclassifier=NA | |||
|UniProt=Q9QZC2,Q9CRY9 | |UniProt=Q9QZC2,Q9CRY9 | ||
|association_with_transcript=-257bp_to_ENSMUST00000099337,NM_018797,uc007gvz.2_5end | |association_with_transcript=-257bp_to_ENSMUST00000099337,NM_018797,uc007gvz.2_5end | ||
|cluster_id=chr10:94407469..94407496,- | |||
|description=CAGE_peak_1_at_Plxnc1_5end | |description=CAGE_peak_1_at_Plxnc1_5end | ||
|id=chr10:94407469..94407496,- | |id=chr10:94407469..94407496,- | ||
Latest revision as of 14:52, 26 September 2015
| Short description: | p1@Plxnc1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Plxnc1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:137 |
| Association with transcript: | -257bp_to_ENSMUST00000099337, NM_018797, uc007gvz.2_5end |
| EntrezGene: | Plxnc1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@Plxnc1 |
|---|
0
20
40
60
80
100
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 4.70e-10 | 23 |
| neuroblast (sensu Vertebrata) | 4.70e-10 | 23 |
Showing 1 to 2 of 2 entries
| Ontology term | p-value | n |
|---|---|---|
| tube | 1.72e-10 | 114 |
| regional part of nervous system | 8.75e-10 | 54 |
| gray matter | 1.51e-09 | 34 |
| neural tube | 5.26e-09 | 52 |
| neural rod | 5.26e-09 | 52 |
| future spinal cord | 5.26e-09 | 52 |
| neural keel | 5.26e-09 | 52 |
| pre-chordal neural plate | 6.30e-09 | 49 |
| neurectoderm | 8.58e-09 | 64 |
| neural plate | 8.58e-09 | 64 |
Showing 1 to 10 of 23 entries
