FFCP PHASE1:Mm9::chr15:37163065..37163092,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr15:37163065..37163092,+ to FFCP PHASE1:Mm9::chr15:37163065..37163092,+: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=252973 | |EntrezGene=252973 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=960 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K5C0,Q9DCN4 | |UniProt=Q8K5C0,Q9DCN4 | ||
|association_with_transcript=274bp_to_ENSMUST00000022895,ENSMUST00000161405,NM_026496,uc007vne.2_5end | |||
|cluster_id=chr15:37163065..37163092,+ | |||
|description=CAGE_peak_4_at_Grhl2_5end | |||
|id=chr15:37163065..37163092,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001008!8.13e-08!17;UBERON:0003102!1.85e-07!23;UBERON:0006554!3.01e-07!16;UBERON:0004175!6.40e-07!9;UBERON:0005178!8.01e-07!17;UBERON:0005181!8.01e-07!17;UBERON:0002224!8.01e-07!17;UBERON:0000915!8.01e-07!17;UBERON:0008947!8.01e-07!17;UBERON:0003258!8.01e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,1.29e-16,5;UBERON:0001003,1.29e-16,5;UBERON:0002097,1.29e-16,5;UBERON:0002199,1.29e-16,5;UBERON:0007029,1.29e-16,5;UBERON:0007376,1.29e-16,5;UBERON:0002416,1.29e-16,5;UBERON:0007383,1.29e-16,5;UBERON:0003102,7.47e-13,22;UBERON:0004175,1.81e-08,9;UBERON:0000080,6.78e-08,4;UBERON:0005904,6.78e-08,4;UBERON:0006947,6.78e-08,4;UBERON:0002120,6.78e-08,4;UBERON:0004054,6.78e-08,4;UBERON:0004875,6.78e-08,4;UBERON:0004876,6.78e-08,4;UBERON:0005721,6.78e-08,4;UBERON:0005754,6.78e-08,4;UBERON:0007297,6.78e-08,4;UBERON:0006554,1.05e-07,18;UBERON:0010147,1.07e-07,2;UBERON:0003937,1.07e-07,2;UBERON:0005399,1.07e-07,2;UBERON:0000058,2.40e-07,7;UBERON:0001008,3.01e-07,19 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0.33575854382378,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.47997726838022,0.22940928106717,0,0.430761996159075,0,0.190023419456374,0,0.443461021310609,0,0,0,0.577703239502549,0.664938581433969,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0.280888840263504,0,0,0,1.12674735821344,0,0,0,0.432982082022428,0.253359865475099,0.505524445014783,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305518091550949,1.61729061793121,3.53811861807145,1.26265113531884,0.390361328888111,0.459804208866946,0,0.452114453507145,0.544291993210623,0,0.187403449119458,0.776110112217047,0.215567992932842,0.567318240503458,0.879755620819744,0.657587197282725,1.39023624612799,0.696504333044333,1.02891068203972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0.232236671860439,0.644337306610467,0.80673409849337,0.444756087689741,0,0.474529061544512,0.164698954724011,0,0,0.19496408711912,1.79763881730844,0.216138049874694,0.597423819763102,0.569003702859245,0.342745537829186,0,0.610953983535943,0.581857461502877,0.631222379012867,0.505892296994058,0.442830443938806,0.470996183524124,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.757965647081939,1.14075483509418,1.01847051465113,0.469380496577004,1.84256883185997,0.476087281772027,0.585400943573396,1.10344600874334,0.44292937929755,0,0.81931657357869,0.863424909329478,0.144649058581512,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.488660878060728,0.989820737835213,1.32745138339963,0.242780636154981,0.604647113929502,0.188605079755898,0.295301892880773,0,0.258428293168221,1.09060118843252,0,0.948110273807448,2.10837217149998,0,0,0,0.517434735131018,0.857348140126369,0.532020700926821,0.178368817602071,0.493647061806363,0,1.17335854031855,1.27099242518292,3.52845436887939,2.14352128823924,5.32832608096488,3.98065304525829,2.74556391207214,3.93938159388147,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,1.08005340821801,1.67270636811575,0.436725127492355,0.944050424693745,0.661227645802687,0,0.129614973291793,4.34937519160848,0,0,0,0,0,0,0,0.2604087696879,0,0.241584120826006,0,0,1.62180172232131,1.23253148597793,0.389762468933385,0,0.39736270956253,0,0,0.302899349844443,0.304827226619999,0,0,0.0962118416403295,0,0.906921534460845,0.221985953374065,0,0.503653849092235,2.31827512838629,0.563047426353546,0.73260649706906,0.857473516316263,5.01572104035363,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.798049746802062,0,0.486213434136588,0.209613162627982,0.183843508450014,0.44449345560323,0,0,0,0.50695859978048,0.754505365544305,0.187283014939765,0.256100609619477,0.402048282689293,0.476293691283074,0.231768651889711,0.192909220463705,0,0.735994600671987,0.685738504770831,0.177475806159338,0.715308569841963,0,0.376437521661322,0.25384382367503,0.73171189149109,0.526139422875686,0.543216455383447,0.561142271657738,0,0.197008964751127,0,0.154936841185966,0.578719832943424,0.999242311751784,0.233931608445408,1.07435527024149,0,0.220591419119515,0 | |phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0.33575854382378,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.47997726838022,0.22940928106717,0,0.430761996159075,0,0.190023419456374,0,0.443461021310609,0,0,0,0.577703239502549,0.664938581433969,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0.280888840263504,0,0,0,1.12674735821344,0,0,0,0.432982082022428,0.253359865475099,0.505524445014783,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305518091550949,1.61729061793121,3.53811861807145,1.26265113531884,0.390361328888111,0.459804208866946,0,0.452114453507145,0.544291993210623,0,0.187403449119458,0.776110112217047,0.215567992932842,0.567318240503458,0.879755620819744,0.657587197282725,1.39023624612799,0.696504333044333,1.02891068203972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0.232236671860439,0.644337306610467,0.80673409849337,0.444756087689741,0,0.474529061544512,0.164698954724011,0,0,0.19496408711912,1.79763881730844,0.216138049874694,0.597423819763102,0.569003702859245,0.342745537829186,0,0.610953983535943,0.581857461502877,0.631222379012867,0.505892296994058,0.442830443938806,0.470996183524124,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.757965647081939,1.14075483509418,1.01847051465113,0.469380496577004,1.84256883185997,0.476087281772027,0.585400943573396,1.10344600874334,0.44292937929755,0,0.81931657357869,0.863424909329478,0.144649058581512,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.488660878060728,0.989820737835213,1.32745138339963,0.242780636154981,0.604647113929502,0.188605079755898,0.295301892880773,0,0.258428293168221,1.09060118843252,0,0.948110273807448,2.10837217149998,0,0,0,0.517434735131018,0.857348140126369,0.532020700926821,0.178368817602071,0.493647061806363,0,1.17335854031855,1.27099242518292,3.52845436887939,2.14352128823924,5.32832608096488,3.98065304525829,2.74556391207214,3.93938159388147,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,1.08005340821801,1.67270636811575,0.436725127492355,0.944050424693745,0.661227645802687,0,0.129614973291793,4.34937519160848,0,0,0,0,0,0,0,0.2604087696879,0,0.241584120826006,0,0,1.62180172232131,1.23253148597793,0.389762468933385,0,0.39736270956253,0,0,0.302899349844443,0.304827226619999,0,0,0.0962118416403295,0,0.906921534460845,0.221985953374065,0,0.503653849092235,2.31827512838629,0.563047426353546,0.73260649706906,0.857473516316263,5.01572104035363,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.798049746802062,0,0.486213434136588,0.209613162627982,0.183843508450014,0.44449345560323,0,0,0,0.50695859978048,0.754505365544305,0.187283014939765,0.256100609619477,0.402048282689293,0.476293691283074,0.231768651889711,0.192909220463705,0,0.735994600671987,0.685738504770831,0.177475806159338,0.715308569841963,0,0.376437521661322,0.25384382367503,0.73171189149109,0.526139422875686,0.543216455383447,0.561142271657738,0,0.197008964751127,0,0.154936841185966,0.578719832943424,0.999242311751784,0.233931608445408,1.07435527024149,0,0.220591419119515,0 | ||
|short_description=p4@Grhl2 | |||
}} | }} |
Latest revision as of 18:25, 26 September 2015
Short description: | p4@Grhl2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Grhl2_5end |
Coexpression cluster: | MCL_coexpression_mm9:960 |
Association with transcript: | 274bp_to_ENSMUST00000022895, ENSMUST00000161405, NM_026496, uc007vne.2_5end |
EntrezGene: | Grhl2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
zone of skin | 1.29e-16 | 5 |
skin epidermis | 1.29e-16 | 5 |
skin of body | 1.29e-16 | 5 |
integument | 1.29e-16 | 5 |
surface | 1.29e-16 | 5 |
outer epithelium | 1.29e-16 | 5 |
integumental system | 1.29e-16 | 5 |
enveloping layer of ectoderm | 1.29e-16 | 5 |
surface structure | 7.47e-13 | 22 |
internal genitalia | 1.81e-08 | 9 |
mesonephros | 6.78e-08 | 4 |
duct of male reproductive system | 6.78e-08 | 4 |
male genital duct | 6.78e-08 | 4 |
pronephros | 6.78e-08 | 4 |
internal male genitalia | 6.78e-08 | 4 |
nephrogenic cord | 6.78e-08 | 4 |
urogenital ridge | 6.78e-08 | 4 |
pronephric mesoderm | 6.78e-08 | 4 |
rostral part of nephrogenic cord | 6.78e-08 | 4 |
presumptive pronephric mesoderm | 6.78e-08 | 4 |
urinary system structure | 1.05e-07 | 18 |
male accessory sex gland | 1.07e-07 | 2 |
sex gland | 1.07e-07 | 2 |
male reproductive gland | 1.07e-07 | 2 |
duct | 2.40e-07 | 7 |
renal system | 3.01e-07 | 19 |