FFCP PHASE1:Mm9::chr4:150283921..150283993,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:150283921..150283993,-
|short_description=p1@Park7
|description=CAGE_peak_1_at_Park7_5end
|association_with_transcript=0bp_to_ENSMUST00000134751,ENSMUST000...") |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=57320 | |EntrezGene=57320 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=A2A816 | |UniProt=A2A816 | ||
|association_with_transcript=0bp_to_ENSMUST00000134751,ENSMUST00000148626_5end | |||
|cluster_id=chr4:150283921..150283993,- | |||
|description=CAGE_peak_1_at_Park7_5end | |||
|id=chr4:150283921..150283993,- | |||
|ontology_enrichment_celltype=CL:0000117!3.28e-10!23;CL:0000337!3.28e-10!23;CL:0000221!1.03e-09!44;CL:0000133!1.03e-09!44;CL:0002319!1.31e-09!43;CL:0000723!7.62e-09!91;CL:0000048!7.62e-09!91;CL:0000034!3.10e-08!97;CL:0000055!5.08e-08!50;CL:0000144!7.11e-08!121;CL:0000012!7.11e-08!121;CL:0000540!7.25e-08!33;CL:0000047!7.25e-08!33;CL:0000031!7.25e-08!33;CL:0000404!7.25e-08!33;CL:0002321!1.49e-07!70;CL:0000220!1.49e-07!70;CL:0000548!3.28e-07!115;CL:0000004!3.28e-07!115;CL:0000255!3.28e-07!115;CL:0002371!5.59e-07!118 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.28e-10,23;CL:0000337,3.28e-10,23;CL:0000221,1.03e-09,44;CL:0000133,1.03e-09,44;CL:0002319,1.31e-09,43;CL:0000723,7.62e-09,91;CL:0000048,7.62e-09,91;CL:0000034,3.10e-08,97;CL:0000540,7.25e-08,33;CL:0000047,7.25e-08,33;CL:0000031,7.25e-08,33;CL:0000404,7.25e-08,33;CL:0002321,1.49e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.16e-09!73;UBERON:0005743!8.16e-09!73;UBERON:0000073!1.01e-07!75;UBERON:0001016!1.01e-07!75;UBERON:0002020!1.10e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.16e-09,73;UBERON:0010314,4.67e-08,92;UBERON:0001016,1.01e-07,75;UBERON:0000073,1.03e-07,54;UBERON:0002020,1.10e-07,34 | |||
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| ||
|short_description=p1@Park7 | |||
}} | }} |
Latest revision as of 18:30, 26 September 2015
Short description: | p1@Park7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Park7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000134751, ENSMUST00000148626_5end |
EntrezGene: | Park7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.28e-10 | 23 |
neuroblast (sensu Vertebrata) | 3.28e-10 | 23 |
ectodermal cell | 1.03e-09 | 44 |
neurectodermal cell | 1.03e-09 | 44 |
neural cell | 1.31e-09 | 43 |
somatic stem cell | 7.62e-09 | 91 |
multi fate stem cell | 7.62e-09 | 91 |
stem cell | 3.10e-08 | 97 |
neuron | 7.25e-08 | 33 |
neuronal stem cell | 7.25e-08 | 33 |
neuroblast | 7.25e-08 | 33 |
electrically signaling cell | 7.25e-08 | 33 |
embryonic cell | 1.49e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 8.16e-09 | 73 |
structure with developmental contribution from neural crest | 4.67e-08 | 92 |
nervous system | 1.01e-07 | 75 |
regional part of nervous system | 1.03e-07 | 54 |
gray matter | 1.10e-07 | 34 |