Personal tools

FFCP PHASE1:Mm9::chr11:103815311..103815328,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr11:103815311..103815328,-
|DHSsupport=NA
|short_description=p2@Nsf
|DPIdataset=NA
|description=CAGE_peak_2_at_Nsf_5end
|association_with_transcript=9bp_to_ENSMUST00000107009,ENSMUST00000145126_5end
|EntrezGene=18195
|EntrezGene=18195
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=9bp_to_ENSMUST00000107009,ENSMUST00000145126_5end
|cluster_id=chr11:103815311..103815328,-
|description=CAGE_peak_2_at_Nsf_5end
|id=chr11:103815311..103815328,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007023!2.01e-09!51;UBERON:0001049!8.36e-09!52;UBERON:0005068!8.36e-09!52;UBERON:0006241!8.36e-09!52;UBERON:0007135!8.36e-09!52;UBERON:0000955!3.55e-08!50;UBERON:0006238!3.55e-08!50;UBERON:0002346!9.83e-08!71;UBERON:0003075!9.83e-08!71;UBERON:0007284!9.83e-08!71;UBERON:0002616!1.00e-07!49;UBERON:0002021!4.22e-07!10;UBERON:0000411!4.22e-07!10;UBERON:0001950!4.22e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.56e-10,54;UBERON:0007023,2.01e-09,51;UBERON:0001049,8.36e-09,52;UBERON:0005068,8.36e-09,52;UBERON:0006241,8.36e-09,52;UBERON:0007135,8.36e-09,52;UBERON:0002021,4.22e-07,10;UBERON:0000411,4.22e-07,10;UBERON:0001950,4.22e-07,10;UBERON:0000955,8.31e-07,47;UBERON:0006238,8.31e-07,47
|phase1_expression=2.88267924788629,5.58360652222978,1.81999695755814,3.93203474698879,2.50447864973174,3.18970616632591,7.70921713965235,7.23090611272827,1.40788722151667,2.57470978954193,3.93801326918661,4.06838010876216,7.53283211697305,8.47977903464275,3.99731714178795,6.88415909125408,4.19737126876888,10.7257136221801,15.76815986466,13.1560792057389,8.84450217571126,6.25532992565577,4.4403964153619,6.23970448894286,6.19405058881359,2.29692785646008,3.4460959692726,4.74036711908956,5.70070258369122,5.04060259519861,5.54326276638262,2.54012269383853,4.92051830067656,0,2.59966457776147,0.997407872150954,1.63335485009895,4.60384793810598,6.2506827561904,6.28228492768558,2.35292595212406,3.41522742479223,3.88408282424923,3.77690453926732,3.85232338634155,4.03802854755699,2.34717403304412,2.39827672018491,2.19686182734472,4.27745777963423,3.21968769738334,1.43752564364972,12.751478060388,5.07753499407941,6.04968838456435,2.31533492432352,5.44413535883638,10.3134418455488,5.86717736492834,12.1667925232568,9.50747105259269,3.38844532069132,2.66788438833342,2.6996991518442,1.97773272513395,2.8419204597844,0.898800331555214,0.768436610643109,1.97010263386108,1.89008313664367,1.89292465216244,15.7108041422092,15.9025349485162,2.32732518508413,2.68367318851062,2.75765635983006,20.9220173898839,31.9218345212969,27.9563890526363,8.70449499019279,13.2657083223494,7.8137005583514,28.4766658981409,28.138130501584,19.0997809721013,11.490514833473,14.8066548031067,10.6247684120421,5.07365495332333,3.92972112555285,5.79728977403356,3.44169550792555,0.679971333707751,1.61910957491345,0,0.896053774194671,7.44355426698285,6.64678258054425,5.45550609666024,4.24007489412408,2.81686839553361,10.2661181931454,12.7402619853323,0,1.94841936910093,2.02687892380079,2.02209778005913,5.48082622651488,26.4116641320115,11.7269289861212,6.07198643681475,4.56698217468212,8.30215790121811,8.28974523039424,6.34979018532806,6.6603293404728,12.8541383221874,6.07317299063629,6.19227386364912,4.04417124868523,5.07935492458905,6.30337829075789,7.45567044872489,38.6470652055242,34.3492599174066,6.89734049063197,3.83408398418945,4.19931911695385,2.03312363316904,43.2894947879938,18.3000241127451,3.14135880282161,34.4172153980707,25.5715457330331,35.9473317088039,24.4984307232314,2.34230536855727,6.34475550111474,7.07623723614289,11.1534183619831,4.03373373184381,2.75882525320168,4.14142898552303,4.52114453507145,3.40182495756639,6.14945857367279,5.62210347358373,16.557015727297,4.31135985865684,6.99692496620931,5.98233822157426,3.72632745126877,4.72680323683516,4.52727816478817,4.93877127379064,4.97585667046233,2.80885274925294,3.60287069960601,1.13665399758237,5.17814431338755,3.51789089971644,5.04173772090842,5.20838418287463,5.1158700254325,4.47374627373397,4.41814495025775,4.82892122519315,3.97002164048376,5.59503489705834,5.74586124276833,5.35054143002648,5.70179950958796,7.68425403518677,4.2946054003319,32.5949420274397,5.24813523134351,9.58214470653014,7.40461586657924,4.47905326123991,4.87697010906921,5.02583099156164,5.24377164020691,6.22658522765637,8.17970192284004,7.11793592316767,6.0938613247884,7.03738584640755,5.37182474511107,7.21367122340745,8.08937467788799,6.48414149624083,7.36822711041159,3.22435431620239,4.34144347916969,13.5249282807697,5.7022371796688,4.46090720485539,3.64706263429657,5.88099795255593,7.67572769493931,6.75094529717912,7.40382983530803,2.66807364378434,5.00535317148282,5.89676985339609,5.17182858485164,5.07150303471257,2.894125917029,3.31013607315846,3.74004978686054,3.89124544260085,3.56929837144506,4.31304619582064,2.23284568601102,4.99260276983297,4.04126204715379,1.97337154874103,1.4473305640901,9.23765950833023,4.16881105895066,5.70377417547091,6.62005834523234,3.52035372432753,8.04030035720716,6.9032655856944,6.43941037930736,7.56648691709717,4.87222317227305,6.53764551495697,7.37384916220821,6.73471429276993,8.10034728056465,1.50791283939272,9.79030230873677,2.45882136509518,6.34654516500885,39.6559957269846,35.8667760972142,1.80328439914343,3.02965112645248,2.52406575533005,2.34263246577983,2.36965737506079,2.38968797952552,2.22798674082394,2.54768877709949,5.66734982344852,3.21481443702443,1.97643888973262,24.0990987316355,6.52924391958036,4.62970569534864,2.60619134965722,4.45419332025846,11.9470624505967,3.8844901784797,5.74414758233027,8.11001842950362,5.02013217897314,6.45613810682248,4.13485269069154,3.99887102425256,3.56497378384721,7.58488219045958,4.21674434299995,6.18813259489121,13.2771446243977,3.78128297465751,4.52755393239641,4.92975180572662,6.20690817747958,5.70780216326626,6.58196082408484,5.78483403317739,5.16277757740163,4.87213762986786,7.05690873775878,5.44124634706884,4.03661066739764,5.54878909339034,4.05865969610664,5.74493149107714,5.53813589596716,38.568462818186,9.7396402054776,3.50857675537478,5.37064129372164,4.70921142511728,8.61173634642459,8.00723606222829,0.849892149969277,1.81936888020755,1.93479963326193,1.90934123603023,4.9032079005076,6.50622294805916,5.18425635944646,3.76358932826044,5.24070152990826,4.18079473792944,4.87655388779482,3.92633912976044,4.53652406521275,8.69875038321696,2.81846469342095,4.03694674318743,3.30916980914195,3.11121901350476,2.84151611651008,3.37912250981556,3.40335992072686,3.1249052362548,5.34782656571125,2.41584120826006,1.72818003754719,5.05617793005085,3.85177909051312,4.5192821152524,2.98817892848929,6.44496104402933,4.56967115996909,3.846254384639,5.31682297828478,5.75508764704442,4.11516755936999,4.63800451629466,5.45764132142614,4.04089734889384,5.49321440253374,4.53460767230423,3.32978930061097,3.05027112472217,3.35769232728157,10.2390484837061,4.87974436173073,5.49454872801795,5.78794623513478,5.01572104035363,16.942555278512,21.6352861158373,18.3326564300607,16.497905504994,26.718218271055,17.3740596399631,31.7260575108949,25.6683085837806,24.9228324941313,21.2281727818246,3.21740777510948,9.17757208822371,4.09760653809922,5.34834777550247,4.40187641518763,2.75765262675021,5.11167473943715,5.56294654545014,6.4183841918363,5.05394423527595,3.8021894983536,5.09291121742406,3.93294331373506,5.18603734479441,5.28406314391642,4.28664322154766,5.09891034157364,4.62982129112892,3.70877310722976,4.56316652416632,4.4573002810104,4.2594193478241,4.29185141905178,6.97662799835177,4.51725025993587,4.3153450024755,4.20734337607377,8.15516105457313,4.20992752922171,8.97827634652382,3.91495559809775,4.72821515402705,4.91077251803627,5.57772628269478,4.82266527452853,4.99621155875892,4.44470056046276,3.65280791882107,4.20834330551455,5.29419405886837,6.02856372613096
|phase1_expression=2.88267924788629,5.58360652222978,1.81999695755814,3.93203474698879,2.50447864973174,3.18970616632591,7.70921713965235,7.23090611272827,1.40788722151667,2.57470978954193,3.93801326918661,4.06838010876216,7.53283211697305,8.47977903464275,3.99731714178795,6.88415909125408,4.19737126876888,10.7257136221801,15.76815986466,13.1560792057389,8.84450217571126,6.25532992565577,4.4403964153619,6.23970448894286,6.19405058881359,2.29692785646008,3.4460959692726,4.74036711908956,5.70070258369122,5.04060259519861,5.54326276638262,2.54012269383853,4.92051830067656,0,2.59966457776147,0.997407872150954,1.63335485009895,4.60384793810598,6.2506827561904,6.28228492768558,2.35292595212406,3.41522742479223,3.88408282424923,3.77690453926732,3.85232338634155,4.03802854755699,2.34717403304412,2.39827672018491,2.19686182734472,4.27745777963423,3.21968769738334,1.43752564364972,12.751478060388,5.07753499407941,6.04968838456435,2.31533492432352,5.44413535883638,10.3134418455488,5.86717736492834,12.1667925232568,9.50747105259269,3.38844532069132,2.66788438833342,2.6996991518442,1.97773272513395,2.8419204597844,0.898800331555214,0.768436610643109,1.97010263386108,1.89008313664367,1.89292465216244,15.7108041422092,15.9025349485162,2.32732518508413,2.68367318851062,2.75765635983006,20.9220173898839,31.9218345212969,27.9563890526363,8.70449499019279,13.2657083223494,7.8137005583514,28.4766658981409,28.138130501584,19.0997809721013,11.490514833473,14.8066548031067,10.6247684120421,5.07365495332333,3.92972112555285,5.79728977403356,3.44169550792555,0.679971333707751,1.61910957491345,0,0.896053774194671,7.44355426698285,6.64678258054425,5.45550609666024,4.24007489412408,2.81686839553361,10.2661181931454,12.7402619853323,0,1.94841936910093,2.02687892380079,2.02209778005913,5.48082622651488,26.4116641320115,11.7269289861212,6.07198643681475,4.56698217468212,8.30215790121811,8.28974523039424,6.34979018532806,6.6603293404728,12.8541383221874,6.07317299063629,6.19227386364912,4.04417124868523,5.07935492458905,6.30337829075789,7.45567044872489,38.6470652055242,34.3492599174066,6.89734049063197,3.83408398418945,4.19931911695385,2.03312363316904,43.2894947879938,18.3000241127451,3.14135880282161,34.4172153980707,25.5715457330331,35.9473317088039,24.4984307232314,2.34230536855727,6.34475550111474,7.07623723614289,11.1534183619831,4.03373373184381,2.75882525320168,4.14142898552303,4.52114453507145,3.40182495756639,6.14945857367279,5.62210347358373,16.557015727297,4.31135985865684,6.99692496620931,5.98233822157426,3.72632745126877,4.72680323683516,4.52727816478817,4.93877127379064,4.97585667046233,2.80885274925294,3.60287069960601,1.13665399758237,5.17814431338755,3.51789089971644,5.04173772090842,5.20838418287463,5.1158700254325,4.47374627373397,4.41814495025775,4.82892122519315,3.97002164048376,5.59503489705834,5.74586124276833,5.35054143002648,5.70179950958796,7.68425403518677,4.2946054003319,32.5949420274397,5.24813523134351,9.58214470653014,7.40461586657924,4.47905326123991,4.87697010906921,5.02583099156164,5.24377164020691,6.22658522765637,8.17970192284004,7.11793592316767,6.0938613247884,7.03738584640755,5.37182474511107,7.21367122340745,8.08937467788799,6.48414149624083,7.36822711041159,3.22435431620239,4.34144347916969,13.5249282807697,5.7022371796688,4.46090720485539,3.64706263429657,5.88099795255593,7.67572769493931,6.75094529717912,7.40382983530803,2.66807364378434,5.00535317148282,5.89676985339609,5.17182858485164,5.07150303471257,2.894125917029,3.31013607315846,3.74004978686054,3.89124544260085,3.56929837144506,4.31304619582064,2.23284568601102,4.99260276983297,4.04126204715379,1.97337154874103,1.4473305640901,9.23765950833023,4.16881105895066,5.70377417547091,6.62005834523234,3.52035372432753,8.04030035720716,6.9032655856944,6.43941037930736,7.56648691709717,4.87222317227305,6.53764551495697,7.37384916220821,6.73471429276993,8.10034728056465,1.50791283939272,9.79030230873677,2.45882136509518,6.34654516500885,39.6559957269846,35.8667760972142,1.80328439914343,3.02965112645248,2.52406575533005,2.34263246577983,2.36965737506079,2.38968797952552,2.22798674082394,2.54768877709949,5.66734982344852,3.21481443702443,1.97643888973262,24.0990987316355,6.52924391958036,4.62970569534864,2.60619134965722,4.45419332025846,11.9470624505967,3.8844901784797,5.74414758233027,8.11001842950362,5.02013217897314,6.45613810682248,4.13485269069154,3.99887102425256,3.56497378384721,7.58488219045958,4.21674434299995,6.18813259489121,13.2771446243977,3.78128297465751,4.52755393239641,4.92975180572662,6.20690817747958,5.70780216326626,6.58196082408484,5.78483403317739,5.16277757740163,4.87213762986786,7.05690873775878,5.44124634706884,4.03661066739764,5.54878909339034,4.05865969610664,5.74493149107714,5.53813589596716,38.568462818186,9.7396402054776,3.50857675537478,5.37064129372164,4.70921142511728,8.61173634642459,8.00723606222829,0.849892149969277,1.81936888020755,1.93479963326193,1.90934123603023,4.9032079005076,6.50622294805916,5.18425635944646,3.76358932826044,5.24070152990826,4.18079473792944,4.87655388779482,3.92633912976044,4.53652406521275,8.69875038321696,2.81846469342095,4.03694674318743,3.30916980914195,3.11121901350476,2.84151611651008,3.37912250981556,3.40335992072686,3.1249052362548,5.34782656571125,2.41584120826006,1.72818003754719,5.05617793005085,3.85177909051312,4.5192821152524,2.98817892848929,6.44496104402933,4.56967115996909,3.846254384639,5.31682297828478,5.75508764704442,4.11516755936999,4.63800451629466,5.45764132142614,4.04089734889384,5.49321440253374,4.53460767230423,3.32978930061097,3.05027112472217,3.35769232728157,10.2390484837061,4.87974436173073,5.49454872801795,5.78794623513478,5.01572104035363,16.942555278512,21.6352861158373,18.3326564300607,16.497905504994,26.718218271055,17.3740596399631,31.7260575108949,25.6683085837806,24.9228324941313,21.2281727818246,3.21740777510948,9.17757208822371,4.09760653809922,5.34834777550247,4.40187641518763,2.75765262675021,5.11167473943715,5.56294654545014,6.4183841918363,5.05394423527595,3.8021894983536,5.09291121742406,3.93294331373506,5.18603734479441,5.28406314391642,4.28664322154766,5.09891034157364,4.62982129112892,3.70877310722976,4.56316652416632,4.4573002810104,4.2594193478241,4.29185141905178,6.97662799835177,4.51725025993587,4.3153450024755,4.20734337607377,8.15516105457313,4.20992752922171,8.97827634652382,3.91495559809775,4.72821515402705,4.91077251803627,5.57772628269478,4.82266527452853,4.99621155875892,4.44470056046276,3.65280791882107,4.20834330551455,5.29419405886837,6.02856372613096
|short_description=p2@Nsf
}}
}}

Latest revision as of 19:25, 26 September 2015

Short description:p2@Nsf
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Nsf_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 9bp_to_ENSMUST00000107009, ENSMUST00000145126_5end
EntrezGene:Nsf
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Nsf

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.88
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I55.58
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.93
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.19
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I87.71
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E97.23
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.41
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.57
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F14.07
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E47.53
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E88.48
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A36.88
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.20
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A210.73
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A415.77
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A613.16
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.84
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H26.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.44
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D16.24
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.19
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I13.45
GP2+ M cell, pool3.CNhs13240.11847-124I24.74
Ileum epithelium, pool1.CNhs13199.10252-104B95.70
Ileum epithelium, pool2.CNhs13232.10253-104C15.04
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.60
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G84.60
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H16.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H36.28
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H23.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.78
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.85
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.04
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.28
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.22
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A212.75
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.08
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A16.05
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.32
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.44
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C510.31
Mouse Granule cells, donor1.CNhs12131.11713-123C35.87
Mouse Granule cells, donor2.CNhs12357.11731-123E312.17
Mouse Granule cells, donor3.CNhs12108.11636-122C79.51
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.39
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.97
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.89
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F115.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D515.90
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.33
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.68
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D320.92
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F331.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D727.96
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.70
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F413.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.81
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E428.48
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E528.14
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I619.10
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D611.49
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F614.81
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E110.62
Mouse Schwann, donor1.CNhs12507.11728-123D95.07
Mouse Schwann, donor2.CNhs12573.11746-123F93.93
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.80
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.44
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.46
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.24
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.82
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H110.27
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.95
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.48
accessory axillary lymph node, adult.CNhs10475.1063-29H926.41
adrenal gland, adult.CNhs10508.49-24D711.73
adrenal gland, embryo E14.CNhs11038.406-44C56.07
adrenal gland, embryo E16.CNhs11004.1254-43D64.57
adrenal gland, embryo E17.CNhs11043.1263-45I18.30
adrenal gland, embryo E18.CNhs11026.1262-18F58.29
adrenal gland, neonate N00.CNhs11191.1311-23C16.35
adrenal gland, neonate N25.CNhs11223.1377-27I36.66
amnion, adult pregnant day17.5.CNhs10488.583-22A812.85
aorta, adult.CNhs10498.46-23H16.07
bone (os femoris), adult.CNhs10483.56-12G26.19
bone (os femoris), neonate N02.CNhs11227.1985-43F54.04
bone (os femoris), neonate N16.CNhs11225.1525-43A65.08
bone (os femoris), neonate N20.CNhs11195.1350-25C36.30
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B238.65
cerebellum, neonate N30.CNhs11135.1395-42I234.35
colon, adult.CNhs10468.36-18H76.90
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.83
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.03
corpora quadrigemina, adult.CNhs10501.16-22A443.29
corpus striatum, adult.CNhs10487.19-21D818.30
corpus striatum, neonate N00.CNhs11226.630-43F13.14
cortex, adult.CNhs10473.12-14D534.42
cortex, neonate N30.CNhs11107.1392-42F225.57
diencephalon, adult.CNhs10482.20-12F235.95
diencephalon, neonate N30.CNhs11201.1388-42B224.50
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.34
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.34
epididymis, adult.CNhs10490.58-23B27.08
eyeball, adult.CNhs10484.31-12G411.15
eyeball, embryo E12.CNhs11016.345-16C64.03
eyeball, embryo E14.CNhs10521.399-16E22.76
eyeball, embryo E15.CNhs10593.426-16C94.14
eyeball, embryo E17.CNhs11023.1261-18D44.52
eyeball, neonate N00.CNhs11207.633-15C63.40
eyeball, neonate N01.CNhs11140.1532-43E76.15
eyeball, neonate N02.CNhs11205.1551-44G85.62
eyeball, neonate N16.CNhs11188.777-19A216.56
forelimb, embryo E11.CNhs10596.335-25E24.31
forelimb, embryo E12.CNhs10600.359-14H27.00
forelimb, embryo E13.CNhs10589.384-1E25.98
forelimb, embryo E14.CNhs10577.413-26A83.73
forelimb, embryo E15.CNhs11007.437-20E74.73
forelimb, embryo E17.CNhs10598.1517-43C44.53
forelimb, embryo E18.CNhs11008.1520-43B54.94
gonad, embryo E13.CNhs11044.1564-45I64.98
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.60
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E95.18
heart, embryo E12.CNhs11015.353-12F53.52
heart, embryo E13.CNhs11013.376-3I95.04
heart, embryo E14.CNhs10597.403-26D45.21
heart, embryo E15.CNhs11017.431-16C85.12
heart, embryo E16.CNhs11021.457-17C64.47
heart, embryo E17.CNhs11025.479-18E54.42
heart, embryo E18.CNhs11030.1283-20G34.83
heart, neonate N00.CNhs11213.639-21E33.97
heart, neonate N03.CNhs11221.1349-25I25.60
heart, neonate N10.CNhs11118.749-24G15.75
heart, neonate N16.CNhs11209.782-15G15.35
heart, neonate N20.CNhs11127.821-26I65.70
heart, neonate N25.CNhs11196.1351-25D37.68
heart, neonate N30.CNhs11202.1390-42D24.29
hippocampus, adult.CNhs10478.13-16E832.59
hippocampus, neonate N00.CNhs11228.627-43G15.25
intestinal mucosa, adult.CNhs10506.860-29I39.58
intestine, adult.CNhs10496.178-9A37.40
intestine, embryo E12.CNhs11019.1251-16I54.48
intestine, embryo E13.CNhs11010.381-16D54.88
intestine, embryo E15.CNhs10602.976-16D85.03
intestine, embryo E16.CNhs10585.463-22H45.24
intestine, embryo E17.CNhs10582.482-18D36.23
intestine, embryo E18.CNhs10526.1289-20F78.18
intestine, neonate N00.CNhs11126.644-26D17.12
intestine, neonate N01.CNhs11192.1322-23E96.09
intestine, neonate N06.CNhs11102.688-20B87.04
intestine, neonate N07.CNhs11095.720-20F25.37
intestine, neonate N10.CNhs11098.755-23A57.21
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E36.48
intestine, neonate N30.CNhs11131.1384-42G17.37
kidney, embryo E14.CNhs10606.411-4I93.22
kidney, embryo E15.CNhs10997.434-16F84.34
kidney, embryo E16.CNhs10584.464-22A513.52
kidney, embryo E17.CNhs11028.483-18I25.70
kidney, embryo E18.CNhs11001.1288-20C74.46
kidney, neonate N00.CNhs11214.646-21G73.65
kidney, neonate N10.CNhs11206.758-6D55.88
kidney, neonate N20.CNhs11113.832-19I17.68
kidney, neonate N25.CNhs11122.1353-25F36.75
kidney, neonate N30.CNhs11203.1385-42H17.40
liver, adult pregnant day01.CNhs10466.508-5B22.67
liver, embryo E12.CNhs10601.355-15F85.01
liver, embryo E13.CNhs10524.378-3H65.90
liver, embryo E14.CNhs10594.409-16E15.17
liver, embryo E15.CNhs10520.433-16D75.07
liver, embryo E16.CNhs10523.462-17F52.89
liver, embryo E17.CNhs10510.481-18A33.31
liver, embryo E18.CNhs10579.499-43G43.74
liver, neonate N00.CNhs11117.641-24F43.89
liver, neonate N03.CNhs11123.1345-25G23.57
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B94.99
liver, neonate N20.CNhs11220.823-25A34.04
liver, neonate N25.CNhs11198.1368-26H11.97
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B19.24
lung, embryo E12.CNhs10522.354-16G24.17
lung, embryo E14.CNhs10604.404-26F85.70
lung, embryo E15.CNhs11020.432-17C56.62
lung, embryo E16.CNhs10998.458-17B63.52
lung, embryo E17.CNhs10605.480-44A68.04
lung, embryo E18.CNhs10583.1287-20I66.90
lung, neonate N00.CNhs11224.640-42C66.44
lung, neonate N06.CNhs11212.683-20E57.57
lung, neonate N07.CNhs11111.715-19A34.87
lung, neonate N10.CNhs11219.750-23E66.54
lung, neonate N20.CNhs11109.822-18A47.37
lung, neonate N25.CNhs11119.1359-25C76.73
lung, neonate N30.CNhs11133.1394-42H28.10
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A19.79
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H26.35
medulla oblongata, adult.CNhs10477.17-12C239.66
medulla oblongata, neonate N30.CNhs11200.1396-42A335.87
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.80
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.03
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.37
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.67
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I924.10
ovary, adult.CNhs10507.91-2I76.53
ovary, embryo E18.CNhs11040.505-44H74.63
ovary, neonate N00.CNhs11217.1299-22I42.61
oviduct, adult pregnant day01.CNhs10500.988-6G64.45
pancreas, adult.CNhs10486.34-16E411.95
pancreas, embryo E14.CNhs11012.405-44F43.88
pancreas, embryo E15.CNhs11042.1556-45F25.74
pancreas, embryo E16.CNhs11003.460-26E58.11
pancreas, embryo E17.CNhs10599.1558-45G35.02
pancreas, embryo E18.CNhs10580.1535-43I76.46
pancreas, neonate N00.CNhs11105.645-26G94.13
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D83.56
pancreas, neonate N16.CNhs11136.787-43B67.58
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G813.28
pituitary gland, embryo E12.CNhs11018.346-16E63.78
pituitary gland, embryo E13.CNhs11009.370-44C74.53
pituitary gland, embryo E14.CNhs11037.398-44A54.93
pituitary gland, embryo E15.CNhs10592.427-16B96.21
pituitary gland, embryo E16.CNhs11036.449-43F65.71
pituitary gland, embryo E17.CNhs11039.1265-44F56.58
pituitary gland, neonate N00.CNhs11190.1308-22E95.78
placenta, adult pregnant day10.CNhs10472.539-13I75.16
placenta, adult pregnant day17.CNhs10464.577-18G34.87
prostate, adult.CNhs10470.859-1F87.06
skin, adult.CNhs10492.30-1C35.44
skin, neonate N00.CNhs11124.650-25G44.04
skin, neonate N03.CNhs11215.662-22H35.55
skin, neonate N06.CNhs11097.693-20I54.06
skin, neonate N10.CNhs11108.762-6C45.74
small intestine, neonate N16.CNhs11114.790-21I15.54
spinal cord, adult.CNhs10505.24-13C938.57
spleen, adult.CNhs10465.25-2G29.74
spleen, embryo E16.CNhs11035.461-43C13.51
spleen, embryo E18.CNhs11011.1271-21F25.37
spleen, neonate N10.CNhs11116.752-24D14.71
spleen, neonate N20.CNhs11112.824-19H18.61
spleen, neonate N25.CNhs11099.1354-25G38.01
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.93
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E34.90
stomach, embryo E15.CNhs10603.1252-16G86.51
stomach, embryo E16.CNhs11022.459-17D45.18
stomach, embryo E17.CNhs11006.1035-18D53.76
stomach, embryo E18.CNhs10999.1286-20C65.24
stomach, neonate N03.CNhs11193.1340-24B84.18
stomach, neonate N07.CNhs11210.718-18A94.88
stomach, neonate N25.CNhs11104.1355-25E43.93
stomach, neonate N30.CNhs11134.1386-42I14.54
submandibular gland, adult.CNhs10469.59-29C18.70
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F54.04
testis, embryo E15.CNhs11034.443-27C53.31
testis, embryo E16.CNhs11033.470-26G53.11
testis, embryo E17.CNhs11029.486-18I52.84
testis, embryo E18.CNhs11027.503-18G53.38
testis, neonate N00.CNhs11189.1300-22B73.40
testis, neonate N07.CNhs11222.726-26I43.12
testis, neonate N10.CNhs11204.763-44D95.35
testis, neonate N20.CNhs11110.839-18H32.42
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B55.06
thymus, embryo E14.CNhs11041.402-44I43.85
thymus, embryo E15.CNhs11005.430-45I24.52
thymus, embryo E16.CNhs11002.456-26C52.99
thymus, embryo E17.CNhs10581.478-18C16.44
thymus, embryo E18.CNhs10595.1273-19G44.57
thymus, neonate N02.CNhs11181.1541-43F83.85
thymus, neonate N03.CNhs11137.2104-43C75.32
thymus, neonate N06.CNhs11197.681-26C45.76
thymus, neonate N07.CNhs11211.713-19D34.12
thymus, neonate N10.CNhs11194.748-24E44.64
thymus, neonate N20.CNhs11186.820-7A25.46
thymus, neonate N25.CNhs11125.1362-25G74.04
thymus, neonate N30.CNhs11132.1393-42G25.49
tongue, adult.CNhs10499.32-1B44.53
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.05
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.36
urinary bladder, adult.CNhs10481.879-12E410.24
uterus, adult pregnant day19.CNhs10497.590-15F54.88
uterus, adult.CNhs10509.92-27E55.49
vagina, adult.CNhs10502.89-27D55.79
vesicular gland, adult.CNhs10491.51-27F85.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A116.94
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A221.64
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A318.33
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D716.50
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A426.72
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A517.37
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A631.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A725.67
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A824.92
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A921.23
whole body, embryo E11.CNhs11014.324-5I83.22
whole body, embryo E12.CNhs10587.857-27C99.18
whole body, embryo E13.CNhs10512.372-23H24.10
whole body, embryo E14.5.CNhs10578.420-27D25.35
whole body, embryo E14.CNhs10519.395-14B14.40
whole body, embryo E16.CNhs10514.453-14F22.76
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.42
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.09
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.28
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.10
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.63
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.56
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.26
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.98
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.52
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.32
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.98
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.73
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.91
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.58
whole body, embryo E17.5.CNhs10513.490-9F94.82
whole body, embryo E17.CNhs10517.475-3I55.00
whole body, embryo E18.CNhs10516.493-3B34.44
whole body, neonate N00.CNhs10525.657-19C23.65
whole body, neonate N01.CNhs10576.659-23C64.21
whole body, neonate N06.CNhs10515.692-21D15.29
whole body, neonate N10.CNhs10518.761-6B46.03





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system9.56e-1054
adult organism2.01e-0951
neural tube8.36e-0952
neural rod8.36e-0952
future spinal cord8.36e-0952
neural keel8.36e-0952
occipital lobe4.22e-0710
visual cortex4.22e-0710
neocortex4.22e-0710
brain8.31e-0747
future brain8.31e-0747
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:103815311..103815328,-&oldid=4270206"