FFCP PHASE1:Mm9::chr12:77896412..77896451,-: Difference between revisions
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|id=chr12:77896412..77896451,-
|short_description=p1@Gpx2
|description=CAGE_peak_1_at_Gpx2_5end
|association_with_transcript=89bp_to_ENSMUST00000082431,NM_030677,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=14776 | |EntrezGene=14776 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1086 | |||
|TSSclassifier=NA | |||
|UniProt=Q9JHC0 | |UniProt=Q9JHC0 | ||
|association_with_transcript=89bp_to_ENSMUST00000082431,NM_030677,uc007nys.1_5end | |||
|cluster_id=chr12:77896412..77896451,- | |||
|description=CAGE_peak_1_at_Gpx2_5end | |||
|id=chr12:77896412..77896451,- | |||
|ontology_enrichment_celltype=CL:0002563!1.88e-08!9;CL:0002251!1.88e-08!9;CL:0000066!5.30e-08!25;CL:0002076!1.16e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.98e-12,25;CL:0002563,1.12e-11,9;CL:0002251,1.12e-11,9;CL:0002076,1.85e-11,15;CL:0000223,6.70e-09,20;CL:0000239,7.10e-08,6;CL:0000677,7.10e-08,6;CL:0000584,7.10e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!5.97e-27!59;UBERON:0000160!1.69e-24!43;UBERON:0001007!1.03e-20!128;UBERON:0001555!1.03e-20!128;UBERON:0007026!1.03e-20!128;UBERON:0004119!1.73e-20!130;UBERON:0000925!1.73e-20!130;UBERON:0006595!1.73e-20!130;UBERON:0004921!2.72e-19!126;UBERON:0004185!2.72e-19!126;UBERON:0000344!3.06e-13!15;UBERON:0001242!1.15e-11!13;UBERON:0000060!1.15e-11!13;UBERON:0001262!1.15e-11!13;UBERON:0004786!1.15e-11!13;UBERON:0000485!7.37e-09!11;UBERON:0003350!1.88e-08!9;UBERON:0004808!1.88e-08!9;UBERON:0001277!1.88e-08!9;UBERON:0005178!2.86e-08!17;UBERON:0005181!2.86e-08!17;UBERON:0002224!2.86e-08!17;UBERON:0000915!2.86e-08!17;UBERON:0008947!2.86e-08!17;UBERON:0003258!2.86e-08!17;UBERON:0004923!7.33e-08!24;UBERON:0002108!1.25e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.39e-32,47;UBERON:0000160,2.96e-29,31;UBERON:0001007,1.10e-21,116;UBERON:0001555,1.10e-21,116;UBERON:0007026,1.10e-21,116;UBERON:0004119,5.17e-21,118;UBERON:0000925,5.17e-21,118;UBERON:0006595,5.17e-21,118;UBERON:0004921,7.12e-20,114;UBERON:0000344,1.06e-18,15;UBERON:0001242,2.20e-16,13;UBERON:0001262,2.20e-16,13;UBERON:0004786,2.20e-16,13;UBERON:0003350,1.12e-11,9;UBERON:0004808,1.12e-11,9;UBERON:0001277,1.12e-11,9;UBERON:0000485,7.60e-11,11;UBERON:0004923,9.63e-10,24;UBERON:0005178,1.51e-07,17;UBERON:0005181,1.51e-07,17;UBERON:0002224,1.51e-07,17;UBERON:0000915,1.51e-07,17;UBERON:0008947,1.51e-07,17;UBERON:0003258,1.51e-07,17 | |||
|phase1_expression=2.7225304007815,56.8829914452159,40.9499315450582,25.4069937497737,41.0734498556005,50.6995401173907,59.571223351859,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,69.7566963379253,73.1815606604272,74.6501553349526,82.7063032625424,89.4205615646439,130.736112585985,107.112805147971,211.309176654505,0,0,0,136.915667762104,137.143582420756,125.972492813882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,6.08715426273523,0,0,0,0,0,5.75822122540183,0,0,0,0.563373679106722,0,0,0,95.039567003923,98.0502679388632,99.5883156679123,10.5049169341535,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0.220841518460394,0,35.4144346314432,0,0,79.1916871146633,0,0,0,0,0,0,0,0,0.62336413367868,0,0,0,0,0,0,0,0,0.150704817835715,0.136072998302656,0.12811372028485,0,0,0.862271971731369,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1905203662061,29.618463466317,0,0.464473343720877,8.76298736990235,6.85723983719365,8.2279876222602,14.0766963323294,37.4877958620164,19.1050787479853,16.8394589896181,14.7227789310452,11.1129529657898,34.1551375288604,55.3313407679217,35.6462879125317,0,0,0,0,0,0,0,0.147610147979602,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,9.05290631816363,1.32643988239339,1.62964976442026,1.52770577197669,0.234690248288502,0.335012514883631,0.714130922658041,0.585400943573396,1.26108115284953,2.21464689648775,1.2756381492599,5.24362607090362,2.24490476425664,6.36455857758651,0,0,0,0,0.321101179975584,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.162886959353576,1.48473110675282,0,6.79785781233948,8.16273603804828,3.20628635585027,4.13422650033082,2.15204603560749,4.13485269069154,1.09060118843252,1.06949213515416,0.316036757935816,1.05418608574999,1.03135543248187,0,0,0,0.214337035031592,0,0.178368817602071,0,0,0,0.21183207086382,0.441056796109924,1.15420377059036,0,0.120625849856312,0.238744688006273,0.492422699235184,25.0673519501672,0,0,0.82554747185289,0,0,0,0,0,0,0,49.6428721367859,1.73984796469624,6.30290348093231,10.6925287413583,12.9634743528971,12.2283035697859,17.3975006836419,11.2408699786457,30.6254452121315,31.4964385099057,4.34937519160848,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0.316011120628178,0,0,0,0.358053391334963,0,0,0.295379054349154,0.100966449948148,0.15241361331,0,0,0,0.116876902181569,21.7661168270603,0,0,0,7.14801497919105,0.187682475451182,5.49454872801795,1.71494703263253,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0.170733605754134,0,0,0.919217542250071,0.888986911206461,0.412070114477788,1.28367683836726,0.758091635291392,1.01391719956096,0.188626341386076,0.749132059759059,0.768301828858431,0.918967503289812,0.952587382566147,0.347652977834566,0.77163688185482,1.23625770240992,0.735994600671987,0.342869252385415,0.70990322463735,1.1921809497366,0.145346416632329,0.752875043322645,0.592302255241736,0.73171189149109,1.05227884575137,0.814824683075171,0,0.355905054372522,0.492522411877817,0.818462086339379,0,1.54325288784913,0.249810577937946,0.935726433781634,2.57845264857958,0.382576664137687,0.661774257358546,0 | |phase1_expression=2.7225304007815,56.8829914452159,40.9499315450582,25.4069937497737,41.0734498556005,50.6995401173907,59.571223351859,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,69.7566963379253,73.1815606604272,74.6501553349526,82.7063032625424,89.4205615646439,130.736112585985,107.112805147971,211.309176654505,0,0,0,136.915667762104,137.143582420756,125.972492813882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,6.08715426273523,0,0,0,0,0,5.75822122540183,0,0,0,0.563373679106722,0,0,0,95.039567003923,98.0502679388632,99.5883156679123,10.5049169341535,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0.220841518460394,0,35.4144346314432,0,0,79.1916871146633,0,0,0,0,0,0,0,0,0.62336413367868,0,0,0,0,0,0,0,0,0.150704817835715,0.136072998302656,0.12811372028485,0,0,0.862271971731369,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1905203662061,29.618463466317,0,0.464473343720877,8.76298736990235,6.85723983719365,8.2279876222602,14.0766963323294,37.4877958620164,19.1050787479853,16.8394589896181,14.7227789310452,11.1129529657898,34.1551375288604,55.3313407679217,35.6462879125317,0,0,0,0,0,0,0,0.147610147979602,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,9.05290631816363,1.32643988239339,1.62964976442026,1.52770577197669,0.234690248288502,0.335012514883631,0.714130922658041,0.585400943573396,1.26108115284953,2.21464689648775,1.2756381492599,5.24362607090362,2.24490476425664,6.36455857758651,0,0,0,0,0.321101179975584,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.162886959353576,1.48473110675282,0,6.79785781233948,8.16273603804828,3.20628635585027,4.13422650033082,2.15204603560749,4.13485269069154,1.09060118843252,1.06949213515416,0.316036757935816,1.05418608574999,1.03135543248187,0,0,0,0.214337035031592,0,0.178368817602071,0,0,0,0.21183207086382,0.441056796109924,1.15420377059036,0,0.120625849856312,0.238744688006273,0.492422699235184,25.0673519501672,0,0,0.82554747185289,0,0,0,0,0,0,0,49.6428721367859,1.73984796469624,6.30290348093231,10.6925287413583,12.9634743528971,12.2283035697859,17.3975006836419,11.2408699786457,30.6254452121315,31.4964385099057,4.34937519160848,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0.316011120628178,0,0,0,0.358053391334963,0,0,0.295379054349154,0.100966449948148,0.15241361331,0,0,0,0.116876902181569,21.7661168270603,0,0,0,7.14801497919105,0.187682475451182,5.49454872801795,1.71494703263253,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0.170733605754134,0,0,0.919217542250071,0.888986911206461,0.412070114477788,1.28367683836726,0.758091635291392,1.01391719956096,0.188626341386076,0.749132059759059,0.768301828858431,0.918967503289812,0.952587382566147,0.347652977834566,0.77163688185482,1.23625770240992,0.735994600671987,0.342869252385415,0.70990322463735,1.1921809497366,0.145346416632329,0.752875043322645,0.592302255241736,0.73171189149109,1.05227884575137,0.814824683075171,0,0.355905054372522,0.492522411877817,0.818462086339379,0,1.54325288784913,0.249810577937946,0.935726433781634,2.57845264857958,0.382576664137687,0.661774257358546,0 | ||
|short_description=p1@Gpx2 | |||
}} | }} |
Latest revision as of 19:39, 26 September 2015
Short description: | p1@Gpx2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gpx2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1086 |
Association with transcript: | 89bp_to_ENSMUST00000082431, NM_030677, uc007nys.1_5end |
EntrezGene: | Gpx2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.98e-12 | 25 |
intestinal epithelial cell | 1.12e-11 | 9 |
epithelial cell of alimentary canal | 1.12e-11 | 9 |
endo-epithelial cell | 1.85e-11 | 15 |
endodermal cell | 6.70e-09 | 20 |
brush border epithelial cell | 7.10e-08 | 6 |
gut absorptive cell | 7.10e-08 | 6 |
enterocyte | 7.10e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 3.39e-32 | 47 |
intestine | 2.96e-29 | 31 |
digestive system | 1.10e-21 | 116 |
digestive tract | 1.10e-21 | 116 |
primitive gut | 1.10e-21 | 116 |
endoderm-derived structure | 5.17e-21 | 118 |
endoderm | 5.17e-21 | 118 |
presumptive endoderm | 5.17e-21 | 118 |
subdivision of digestive tract | 7.12e-20 | 114 |
mucosa | 1.06e-18 | 15 |
intestinal mucosa | 2.20e-16 | 13 |
wall of intestine | 2.20e-16 | 13 |
gastrointestinal system mucosa | 2.20e-16 | 13 |
epithelium of mucosa | 1.12e-11 | 9 |
gastrointestinal system epithelium | 1.12e-11 | 9 |
intestinal epithelium | 1.12e-11 | 9 |
simple columnar epithelium | 7.60e-11 | 11 |
organ component layer | 9.63e-10 | 24 |
thoracic cavity element | 1.51e-07 | 17 |
thoracic segment organ | 1.51e-07 | 17 |
thoracic cavity | 1.51e-07 | 17 |
thoracic segment of trunk | 1.51e-07 | 17 |
respiratory primordium | 1.51e-07 | 17 |
endoderm of foregut | 1.51e-07 | 17 |