FFCP PHASE1:Mm9::chr12:77896458..77896465,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14776 | |EntrezGene=14776 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1086 | |||
|TSSclassifier=NA | |||
|UniProt=Q9JHC0 | |UniProt=Q9JHC0 | ||
|association_with_transcript=75bp_to_ENSMUST00000082431,NM_030677,uc007nys.1_5end | |association_with_transcript=75bp_to_ENSMUST00000082431,NM_030677,uc007nys.1_5end | ||
|cluster_id=chr12:77896458..77896465,- | |||
|description=CAGE_peak_3_at_Gpx2_5end | |description=CAGE_peak_3_at_Gpx2_5end | ||
|id=chr12:77896458..77896465,- | |id=chr12:77896458..77896465,- | ||
|ontology_enrichment_celltype=CL:0002563!7.14e-12!9;CL:0002251!7.14e-12!9;CL:0002076!1.53e-11!15;CL:0000066!7.21e-11!25;CL:0000239!7.35e-08!6;CL:0000677!7.35e-08!6;CL:0000212!7.35e-08!6;CL:0000584!7.35e-08!6;CL:0000223!9.23e-08!20 | |ontology_enrichment_celltype=CL:0002563!7.14e-12!9;CL:0002251!7.14e-12!9;CL:0002076!1.53e-11!15;CL:0000066!7.21e-11!25;CL:0000239!7.35e-08!6;CL:0000677!7.35e-08!6;CL:0000212!7.35e-08!6;CL:0000584!7.35e-08!6;CL:0000223!9.23e-08!20 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,4.07e-19,15;CL:0000066,8.19e-18,25;CL:0002563,1.06e-17,9;CL:0002251,1.06e-17,9;CL:0000223,9.36e-14,20;CL:0000239,3.61e-10,6;CL:0000677,3.61e-10,6;CL:0000584,3.61e-10,6;CL:0002250,1.81e-09,3;CL:0000682,7.35e-09,3;CL:0000075,1.13e-08,7;CL:0000068,2.38e-08,3;CL:0002202,2.38e-08,3;CL:0000069,2.38e-08,3;CL:0002632,2.38e-08,3;CL:0002368,2.38e-08,3;CL:0000307,2.38e-08,3;CL:0000377,2.38e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!4.25e-29!59;UBERON:0000160!4.29e-27!43;UBERON:0001007!5.35e-22!128;UBERON:0001555!5.35e-22!128;UBERON:0007026!5.35e-22!128;UBERON:0004119!2.17e-21!130;UBERON:0000925!2.17e-21!130;UBERON:0006595!2.17e-21!130;UBERON:0004921!3.02e-20!126;UBERON:0004185!3.02e-20!126;UBERON:0000344!7.99e-19!15;UBERON:0001242!1.23e-16!13;UBERON:0000060!1.23e-16!13;UBERON:0001262!1.23e-16!13;UBERON:0004786!1.23e-16!13;UBERON:0003350!7.14e-12!9;UBERON:0004808!7.14e-12!9;UBERON:0001277!7.14e-12!9;UBERON:0000485!3.19e-11!11;UBERON:0004923!6.28e-10!24;UBERON:0005178!8.23e-07!17;UBERON:0005181!8.23e-07!17;UBERON:0002224!8.23e-07!17;UBERON:0000915!8.23e-07!17;UBERON:0008947!8.23e-07!17;UBERON:0003258!8.23e-07!17 | |ontology_enrichment_uberon=UBERON:0005409!4.25e-29!59;UBERON:0000160!4.29e-27!43;UBERON:0001007!5.35e-22!128;UBERON:0001555!5.35e-22!128;UBERON:0007026!5.35e-22!128;UBERON:0004119!2.17e-21!130;UBERON:0000925!2.17e-21!130;UBERON:0006595!2.17e-21!130;UBERON:0004921!3.02e-20!126;UBERON:0004185!3.02e-20!126;UBERON:0000344!7.99e-19!15;UBERON:0001242!1.23e-16!13;UBERON:0000060!1.23e-16!13;UBERON:0001262!1.23e-16!13;UBERON:0004786!1.23e-16!13;UBERON:0003350!7.14e-12!9;UBERON:0004808!7.14e-12!9;UBERON:0001277!7.14e-12!9;UBERON:0000485!3.19e-11!11;UBERON:0004923!6.28e-10!24;UBERON:0005178!8.23e-07!17;UBERON:0005181!8.23e-07!17;UBERON:0002224!8.23e-07!17;UBERON:0000915!8.23e-07!17;UBERON:0008947!8.23e-07!17;UBERON:0003258!8.23e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.92e-34,47;UBERON:0000160,1.43e-32,31;UBERON:0000344,3.47e-31,15;UBERON:0001242,6.48e-27,13;UBERON:0001262,6.48e-27,13;UBERON:0004786,6.48e-27,13;UBERON:0004923,2.73e-18,24;UBERON:0003350,1.06e-17,9;UBERON:0004808,1.06e-17,9;UBERON:0001277,1.06e-17,9;UBERON:0001007,1.54e-17,116;UBERON:0001555,1.54e-17,116;UBERON:0007026,1.54e-17,116;UBERON:0004119,3.96e-17,118;UBERON:0000925,3.96e-17,118;UBERON:0006595,3.96e-17,118;UBERON:0004921,2.76e-15,114;UBERON:0000485,3.13e-14,11;UBERON:0002108,6.64e-11,4;UBERON:0000331,7.35e-09,3;UBERON:0002116,7.35e-09,3;UBERON:0001204,7.35e-09,3;UBERON:0001168,7.35e-09,3;UBERON:0003126,2.38e-08,3;UBERON:0001005,2.38e-08,3;UBERON:0007196,2.38e-08,3;UBERON:0001558,2.38e-08,3 | |||
|phase1_expression=0.480446541314382,1.74487703819681,2.27499619694768,0.60492842261366,1.50268718983904,3.18970616632591,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.59992422793407,2.06468352960453,3.44539178469012,2.58457197695445,4.52489588640367,3.99049180858385,1.76421090831952,9.09095093686749,0,0,0,8.37669697278696,7.64679368649065,5.71674197534634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,2.59789249213457,2.53359865475099,2.52762222507392,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,3.43785736662608,0.213288250535234,0.232236671860439,0.257734922644187,0,0,0.570676878337677,1.89811624617805,0.823494773620054,1.25667604400135,0.397912944082302,0.38992817423824,4.49409704327111,3.8904848977445,1.59313018603494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.169745085775188,0,0,0,0.195133647857799,0.157635144106191,0,0.159454768657487,0.655453258862952,0.345369963731791,0.723245292907558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728341908464944,0.302323556964751,0.754420319023592,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,2.86401185404534,0,0,1.08005340821801,1.25452977608681,0.655087691238533,1.21377911746339,0.495920734352016,3.92633912976044,1.55537967950151,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.906921534460845,0,0,0,0.386379188064381,0,0.549454872801795,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.320919209591815,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0,0.177475806159338,0,0.145346416632329,0,0,0,0,0.135804113845862,0,0.118635018124174,0,0.409231043169689,0,0,0.249810577937946,0,0,0,0,0 | |phase1_expression=0.480446541314382,1.74487703819681,2.27499619694768,0.60492842261366,1.50268718983904,3.18970616632591,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.59992422793407,2.06468352960453,3.44539178469012,2.58457197695445,4.52489588640367,3.99049180858385,1.76421090831952,9.09095093686749,0,0,0,8.37669697278696,7.64679368649065,5.71674197534634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,2.59789249213457,2.53359865475099,2.52762222507392,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,3.43785736662608,0.213288250535234,0.232236671860439,0.257734922644187,0,0,0.570676878337677,1.89811624617805,0.823494773620054,1.25667604400135,0.397912944082302,0.38992817423824,4.49409704327111,3.8904848977445,1.59313018603494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.169745085775188,0,0,0,0.195133647857799,0.157635144106191,0,0.159454768657487,0.655453258862952,0.345369963731791,0.723245292907558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728341908464944,0.302323556964751,0.754420319023592,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,2.86401185404534,0,0,1.08005340821801,1.25452977608681,0.655087691238533,1.21377911746339,0.495920734352016,3.92633912976044,1.55537967950151,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.906921534460845,0,0,0,0.386379188064381,0,0.549454872801795,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.320919209591815,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0,0.177475806159338,0,0.145346416632329,0,0,0,0,0.135804113845862,0,0.118635018124174,0,0.409231043169689,0,0,0.249810577937946,0,0,0,0,0 | ||
|short_description=p3@Gpx2 | |short_description=p3@Gpx2 | ||
}} | }} |
Latest revision as of 19:39, 26 September 2015
Short description: | p3@Gpx2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gpx2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1086 |
Association with transcript: | 75bp_to_ENSMUST00000082431, NM_030677, uc007nys.1_5end |
EntrezGene: | Gpx2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 4.07e-19 | 15 |
epithelial cell | 8.19e-18 | 25 |
intestinal epithelial cell | 1.06e-17 | 9 |
epithelial cell of alimentary canal | 1.06e-17 | 9 |
endodermal cell | 9.36e-14 | 20 |
brush border epithelial cell | 3.61e-10 | 6 |
gut absorptive cell | 3.61e-10 | 6 |
enterocyte | 3.61e-10 | 6 |
intestinal crypt stem cell | 1.81e-09 | 3 |
M cell of gut | 7.35e-09 | 3 |
columnar/cuboidal epithelial cell | 1.13e-08 | 7 |
duct epithelial cell | 2.38e-08 | 3 |
epithelial cell of tracheobronchial tree | 2.38e-08 | 3 |
branched duct epithelial cell | 2.38e-08 | 3 |
epithelial cell of lower respiratory tract | 2.38e-08 | 3 |
respiratory epithelial cell | 2.38e-08 | 3 |
tracheal epithelial cell | 2.38e-08 | 3 |
tracheoblast | 2.38e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 3.92e-34 | 47 |
intestine | 1.43e-32 | 31 |
mucosa | 3.47e-31 | 15 |
intestinal mucosa | 6.48e-27 | 13 |
wall of intestine | 6.48e-27 | 13 |
gastrointestinal system mucosa | 6.48e-27 | 13 |
organ component layer | 2.73e-18 | 24 |
epithelium of mucosa | 1.06e-17 | 9 |
gastrointestinal system epithelium | 1.06e-17 | 9 |
intestinal epithelium | 1.06e-17 | 9 |
digestive system | 1.54e-17 | 116 |
digestive tract | 1.54e-17 | 116 |
primitive gut | 1.54e-17 | 116 |
endoderm-derived structure | 3.96e-17 | 118 |
endoderm | 3.96e-17 | 118 |
presumptive endoderm | 3.96e-17 | 118 |
subdivision of digestive tract | 2.76e-15 | 114 |
simple columnar epithelium | 3.13e-14 | 11 |
small intestine | 6.64e-11 | 4 |
ileal mucosa | 7.35e-09 | 3 |
ileum | 7.35e-09 | 3 |
mucosa of small intestine | 7.35e-09 | 3 |
wall of small intestine | 7.35e-09 | 3 |
trachea | 2.38e-08 | 3 |
respiratory airway | 2.38e-08 | 3 |
tracheobronchial tree | 2.38e-08 | 3 |
lower respiratory tract | 2.38e-08 | 3 |