Personal tools

FFCP PHASE1:Mm9::chr4:154936457..154936522,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr4:154936457..154936522,+ |short_description=p2@Nadk |description=CAGE_peak_2_at_Nadk_5end |association_with_transcript=0bp_to_ENSMUST00000030939,NM_138671,uc...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr4:154936457..154936522,+
|DHSsupport=NA
|short_description=p2@Nadk
|DPIdataset=NA
|description=CAGE_peak_2_at_Nadk_5end
|association_with_transcript=0bp_to_ENSMUST00000030939,NM_138671,uc008wdt.2_5end
|EntrezGene=192185
|EntrezGene=192185
|HGNC=
|HGNC=
|MCL_coexpression_id=3
|TSSclassifier=NA
|UniProt=P58058,Q3UGI1
|UniProt=P58058,Q3UGI1
|association_with_transcript=0bp_to_ENSMUST00000030939,NM_138671,uc008wdt.2_5end
|cluster_id=chr4:154936457..154936522,+
|description=CAGE_peak_2_at_Nadk_5end
|id=chr4:154936457..154936522,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000049,2.22e-07,19
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002204!1.64e-12!32;UBERON:0002405!2.67e-12!70;UBERON:0000926!2.39e-11!193;UBERON:0004120!2.39e-11!193;UBERON:0006603!2.39e-11!193;UBERON:0002193!1.12e-10!48;UBERON:0002390!1.34e-09!45;UBERON:0003061!1.34e-09!45;UBERON:0001474!2.83e-09!22;UBERON:0004765!2.83e-09!22;UBERON:0001434!2.83e-09!22;UBERON:0002371!4.12e-09!16;UBERON:0001007!8.80e-09!128;UBERON:0001555!8.80e-09!128;UBERON:0007026!8.80e-09!128;UBERON:0004119!9.30e-09!130;UBERON:0000925!9.30e-09!130;UBERON:0006595!9.30e-09!130;UBERON:0004921!2.81e-08!126;UBERON:0004185!2.81e-08!126;UBERON:0003104!3.17e-08!131;UBERON:0009142!3.17e-08!131;UBERON:0003081!1.66e-07!88
|ontology_enrichment_uberon_v019_2=UBERON:0002204,6.61e-14,32;UBERON:0002193,9.20e-12,48;UBERON:0002405,9.20e-12,48;UBERON:0001474,1.36e-10,22;UBERON:0004765,1.36e-10,22;UBERON:0001434,1.36e-10,22;UBERON:0002390,1.61e-10,45;UBERON:0003061,1.61e-10,45;UBERON:0002371,2.42e-10,16;UBERON:0001007,9.32e-08,116;UBERON:0001555,9.32e-08,116;UBERON:0007026,9.32e-08,116;UBERON:0004119,1.14e-07,118;UBERON:0000925,1.14e-07,118;UBERON:0006595,1.14e-07,118;UBERON:0003081,1.28e-07,87;UBERON:0004921,3.06e-07,114;UBERON:0000926,6.49e-07,120;UBERON:0004120,6.49e-07,120;UBERON:0006603,6.49e-07,120
|phase1_expression=0.320297694209588,6.63053274514786,4.09499315450582,0.60492842261366,0,9.73699777088961,12.3814699515629,0.516493293766305,0.985521055061667,0.936258105287974,1.19852577757853,0.478632953972018,0.171200729931206,0,5.99597571268193,7.08663435864391,2.09868563438444,11.987562283613,10.4206969540361,5.09267582157636,2.63634199468316,0.0992909512008853,0,6.87967418011649,3.21172993494038,8.03924749761028,6.8921919385452,10.5580904016086,0.570070258369122,1.26015064879965,9.5344119581781,0,0,0,4.33277429626912,2.82598897109437,1.83752420636132,584.270156508723,397.699690362614,487.400605639606,852.935657644971,655.040620075149,590.380589285883,47.4631003767926,37.0025798951228,0.734187008646726,0,0,0,0,0.139986421625363,0,1.67782606057736,0.725362142011344,0.672187598284928,3.34437266846731,3.43840127926508,1.03134418455488,0,0,0,0,0,113.387364377456,140.41902348451,102.309136552238,11.6844043102178,5.76327457982332,0,0,0,0,0.441737081903227,0,0.0958454710182364,0,1.10115880999389,0.383062014255563,0.307213066512487,0,0.0914876436024097,0,0.279182999001381,0.56276261003168,0.61119299110724,0,0.427115042397309,0,0.302904773332736,0.0755715601067855,2.6087803983151,1.72084775396277,0.679971333707751,0,0.649776417447669,0,6.31999890592883,0.170430322578058,0,0,0.14084341977668,2.56652954828636,7.64415719119937,0,0.649473123033642,0.506719730950197,0.505524445014783,3.31133251185274,24.5990989464813,3.41416919849097,0.867426633830679,0.913396434936424,0.691846491768175,1.50722640552623,0.940709657085638,2.01066546127481,0.741584903203122,10.1219549843938,38.0382537338446,6.14714029800155,17.2256384399107,14.5462575940567,3.72783522436244,0,0.209446706813455,4.08731288333746,28.0367391343853,33.5945529356308,35.9608742616773,0.149790639404823,0,0,0,0,0,0.324482526135515,0.305518091550949,20.5271501506653,2.0217820674694,2.73574412652416,0.130120442962704,0.459804208866946,0,0.452114453507145,0.340182495756639,0.12811372028485,0.187403449119458,0.776110112217047,0.215567992932842,0,0,0.219195732427575,0.556094498451196,0.696504333044333,0.823128545631774,0.59710280045548,43.5372176134206,46.065275373534,36.941254921427,0,0,0,0.23674473558521,1.37734962223183,0.462801338662135,0,0,0.467061369468678,0.658239399653922,2.95501435342371,0.729619285912702,1.31579988682799,8.12335426576887,2.54992195644706,0.420579897128254,0,0,0.528901133327089,0,0.232236671860439,0.644337306610467,0.605050573870028,0.667134131534611,0.760902504450237,1.42358718463353,0.988193728344065,2.01068167040216,2.38747766449381,3.50935356814416,4.49409704327111,4.10662294761919,3.98282546508734,0.379335801906163,0.342745537829186,1.1270773567308,0.203651327845314,0.193952487167626,0.140271639780637,0.569128834118316,0.442830443938806,1.72698600625512,0.370191491765402,4.74324203339438,0.500535317148282,0.393117990226406,1.79889689907883,3.44862206360455,5.06472035480075,7.12952384987975,10.64475708568,11.5116011010275,4.66754402419738,8.62609239164127,10.0478055870496,5.61667811606209,1.76805214562978,2.15276896226295,1.92977408545347,19.2143317773269,0.568474235311454,0.488894929326078,0.509235257325564,0,1.84256883185997,2.85652369063216,3.51240566144038,7.09358148477859,8.858587585951,4.30527875375215,14.2561083802692,20.2041428783098,4.91806799177139,153.807109618058,217.562273527484,5.90117127622843,9.10591262805617,0.642202359951168,0.234423373184406,0.655739781506702,4.54447668967871,0,0,0,0,0,0,0,0,0,0.321321316421807,2.2710413633323,0.35613120733451,0.162886959353576,6.59880491890142,1.32745138339963,0.485561272309963,0.604647113929502,1.13163047853539,2.06711325016541,0.922305443831782,1.03371317267288,1.45413491791002,1.06949213515416,2.21225730555071,2.10837217149998,0,0.340439605753788,0.18006109403131,0.129358683782755,0.428674070063185,0.532020700926821,0.713475270408282,0.164549020602121,1.2178597964584,2.3467170806371,0.42366414172764,1.54369878638473,1.48397627647332,0.968786560175433,1.38719727334758,0.835606408021955,1.31312719796049,4.08073171281791,0.18542530201051,24.9471485964865,19.4003655885429,32.0386532349601,12.2439497053049,10.66214976224,14.870581258424,22.4371527591889,18.0537373497519,15.7547970137043,1.90934123603023,0,1.82987520414164,0.648032044930808,0.627264888043406,1.09181281873089,0.539457385539283,2.81021749466142,4.18809507174447,4.14767914533737,3.72803587852155,0,0.747582730219894,0.165458490457098,1.36115831840833,0.774958940866387,1.35164900392623,1.40828686374905,1.43224823328345,0.314578033277133,0,0.864090018773596,3.16011120628178,2.63542779877213,2.97861775777999,2.5984164595559,1.9692936523423,1.58945083825012,1.20195449519969,1.32920574457119,1.31256384932592,1.143102099825,2.21817607301049,1.65678397257579,2.69393156592922,1.98690733708667,0.906921534460845,0,0,0.167884616364078,2.12508553435409,2.81523713176773,7.3260649706906,5.35920947697665,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0.729320151204882,0.419226325255965,1.2869045591501,0.888986911206461,2.26638562962784,0.320919209591815,1.76888048234658,0.50695859978048,2.07488975524684,1.12369808963859,1.02440243847791,1.09127391015665,0.476293691283074,0.811190281613988,0.77163688185482,0.412085900803307,1.03039244094078,1.02860775715625,1.4198064492747,0.953744759789284,0.872078499793971,0.752875043322645,0.592302255241736,1.28049581010941,0.263069711437843,0.950628796921032,1.12228454331548,0.711810108745045,0.591026894253381,1.63692417267876,0.77468420592983,2.50778594275484,0.749431733813838,1.16965804222704,1.71896843238639,2.86932498103265,5.7353768971074,6.95603506861264
|phase1_expression=0.320297694209588,6.63053274514786,4.09499315450582,0.60492842261366,0,9.73699777088961,12.3814699515629,0.516493293766305,0.985521055061667,0.936258105287974,1.19852577757853,0.478632953972018,0.171200729931206,0,5.99597571268193,7.08663435864391,2.09868563438444,11.987562283613,10.4206969540361,5.09267582157636,2.63634199468316,0.0992909512008853,0,6.87967418011649,3.21172993494038,8.03924749761028,6.8921919385452,10.5580904016086,0.570070258369122,1.26015064879965,9.5344119581781,0,0,0,4.33277429626912,2.82598897109437,1.83752420636132,584.270156508723,397.699690362614,487.400605639606,852.935657644971,655.040620075149,590.380589285883,47.4631003767926,37.0025798951228,0.734187008646726,0,0,0,0,0.139986421625363,0,1.67782606057736,0.725362142011344,0.672187598284928,3.34437266846731,3.43840127926508,1.03134418455488,0,0,0,0,0,113.387364377456,140.41902348451,102.309136552238,11.6844043102178,5.76327457982332,0,0,0,0,0.441737081903227,0,0.0958454710182364,0,1.10115880999389,0.383062014255563,0.307213066512487,0,0.0914876436024097,0,0.279182999001381,0.56276261003168,0.61119299110724,0,0.427115042397309,0,0.302904773332736,0.0755715601067855,2.6087803983151,1.72084775396277,0.679971333707751,0,0.649776417447669,0,6.31999890592883,0.170430322578058,0,0,0.14084341977668,2.56652954828636,7.64415719119937,0,0.649473123033642,0.506719730950197,0.505524445014783,3.31133251185274,24.5990989464813,3.41416919849097,0.867426633830679,0.913396434936424,0.691846491768175,1.50722640552623,0.940709657085638,2.01066546127481,0.741584903203122,10.1219549843938,38.0382537338446,6.14714029800155,17.2256384399107,14.5462575940567,3.72783522436244,0,0.209446706813455,4.08731288333746,28.0367391343853,33.5945529356308,35.9608742616773,0.149790639404823,0,0,0,0,0,0.324482526135515,0.305518091550949,20.5271501506653,2.0217820674694,2.73574412652416,0.130120442962704,0.459804208866946,0,0.452114453507145,0.340182495756639,0.12811372028485,0.187403449119458,0.776110112217047,0.215567992932842,0,0,0.219195732427575,0.556094498451196,0.696504333044333,0.823128545631774,0.59710280045548,43.5372176134206,46.065275373534,36.941254921427,0,0,0,0.23674473558521,1.37734962223183,0.462801338662135,0,0,0.467061369468678,0.658239399653922,2.95501435342371,0.729619285912702,1.31579988682799,8.12335426576887,2.54992195644706,0.420579897128254,0,0,0.528901133327089,0,0.232236671860439,0.644337306610467,0.605050573870028,0.667134131534611,0.760902504450237,1.42358718463353,0.988193728344065,2.01068167040216,2.38747766449381,3.50935356814416,4.49409704327111,4.10662294761919,3.98282546508734,0.379335801906163,0.342745537829186,1.1270773567308,0.203651327845314,0.193952487167626,0.140271639780637,0.569128834118316,0.442830443938806,1.72698600625512,0.370191491765402,4.74324203339438,0.500535317148282,0.393117990226406,1.79889689907883,3.44862206360455,5.06472035480075,7.12952384987975,10.64475708568,11.5116011010275,4.66754402419738,8.62609239164127,10.0478055870496,5.61667811606209,1.76805214562978,2.15276896226295,1.92977408545347,19.2143317773269,0.568474235311454,0.488894929326078,0.509235257325564,0,1.84256883185997,2.85652369063216,3.51240566144038,7.09358148477859,8.858587585951,4.30527875375215,14.2561083802692,20.2041428783098,4.91806799177139,153.807109618058,217.562273527484,5.90117127622843,9.10591262805617,0.642202359951168,0.234423373184406,0.655739781506702,4.54447668967871,0,0,0,0,0,0,0,0,0,0.321321316421807,2.2710413633323,0.35613120733451,0.162886959353576,6.59880491890142,1.32745138339963,0.485561272309963,0.604647113929502,1.13163047853539,2.06711325016541,0.922305443831782,1.03371317267288,1.45413491791002,1.06949213515416,2.21225730555071,2.10837217149998,0,0.340439605753788,0.18006109403131,0.129358683782755,0.428674070063185,0.532020700926821,0.713475270408282,0.164549020602121,1.2178597964584,2.3467170806371,0.42366414172764,1.54369878638473,1.48397627647332,0.968786560175433,1.38719727334758,0.835606408021955,1.31312719796049,4.08073171281791,0.18542530201051,24.9471485964865,19.4003655885429,32.0386532349601,12.2439497053049,10.66214976224,14.870581258424,22.4371527591889,18.0537373497519,15.7547970137043,1.90934123603023,0,1.82987520414164,0.648032044930808,0.627264888043406,1.09181281873089,0.539457385539283,2.81021749466142,4.18809507174447,4.14767914533737,3.72803587852155,0,0.747582730219894,0.165458490457098,1.36115831840833,0.774958940866387,1.35164900392623,1.40828686374905,1.43224823328345,0.314578033277133,0,0.864090018773596,3.16011120628178,2.63542779877213,2.97861775777999,2.5984164595559,1.9692936523423,1.58945083825012,1.20195449519969,1.32920574457119,1.31256384932592,1.143102099825,2.21817607301049,1.65678397257579,2.69393156592922,1.98690733708667,0.906921534460845,0,0,0.167884616364078,2.12508553435409,2.81523713176773,7.3260649706906,5.35920947697665,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0.729320151204882,0.419226325255965,1.2869045591501,0.888986911206461,2.26638562962784,0.320919209591815,1.76888048234658,0.50695859978048,2.07488975524684,1.12369808963859,1.02440243847791,1.09127391015665,0.476293691283074,0.811190281613988,0.77163688185482,0.412085900803307,1.03039244094078,1.02860775715625,1.4198064492747,0.953744759789284,0.872078499793971,0.752875043322645,0.592302255241736,1.28049581010941,0.263069711437843,0.950628796921032,1.12228454331548,0.711810108745045,0.591026894253381,1.63692417267876,0.77468420592983,2.50778594275484,0.749431733813838,1.16965804222704,1.71896843238639,2.86932498103265,5.7353768971074,6.95603506861264
|short_description=p2@Nadk
}}
}}

Latest revision as of 20:00, 26 September 2015

Short description:p2@Nadk
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Nadk_5end
Coexpression cluster:MCL_coexpression_mm9:3
Association with transcript: 0bp_to_ENSMUST00000030939, NM_138671, uc008wdt.2_5end
EntrezGene:Nadk
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Nadk

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I56.63
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.09
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I79.74
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I812.38
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.99
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.20
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.48
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A16.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A37.09
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A211.99
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A410.42
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.09
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.64
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D16.88
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.21
GP2+ M cell, pool1.CNhs13228.11845-124H98.04
GP2+ M cell, pool2.CNhs13231.11846-124I16.89
GP2+ M cell, pool3.CNhs13240.11847-124I210.56
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C89.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.33
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8584.27
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1397.70
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3487.40
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9852.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2655.04
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4590.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D847.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D937.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.34
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.44
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7113.39
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7140.42
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2102.31
Mouse Microglia, donor1.CNhs12629.11718-123C811.68
Mouse Microglia, donor2.CNhs12634.11736-123E85.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.61
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.32
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.31
accessory axillary lymph node, adult.CNhs10475.1063-29H924.60
adrenal gland, adult.CNhs10508.49-24D73.41
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F51.51
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I32.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H110.12
bone (os femoris), adult.CNhs10483.56-12G238.04
bone (os femoris), neonate N02.CNhs11227.1985-43F56.15
bone (os femoris), neonate N16.CNhs11225.1525-43A617.23
bone (os femoris), neonate N20.CNhs11195.1350-25C314.55
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H74.09
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C728.04
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D133.59
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D435.96
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A220.53
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G42.74
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C843.54
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D246.07
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D536.94
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G12.96
heart, neonate N16.CNhs11209.782-15G10.73
heart, neonate N20.CNhs11127.821-26I61.32
heart, neonate N25.CNhs11196.1351-25D38.12
heart, neonate N30.CNhs11202.1390-42D22.55
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B82.01
intestine, neonate N07.CNhs11095.720-20F22.39
intestine, neonate N10.CNhs11098.755-23A53.51
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E34.11
intestine, neonate N30.CNhs11131.1384-42G13.98
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.57
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F31.73
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B24.74
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E11.80
liver, embryo E15.CNhs10520.433-16D73.45
liver, embryo E16.CNhs10523.462-17F55.06
liver, embryo E17.CNhs10510.481-18A37.13
liver, embryo E18.CNhs10579.499-43G410.64
liver, neonate N00.CNhs11117.641-24F411.51
liver, neonate N03.CNhs11123.1345-25G24.67
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H210.05
liver, neonate N10.CNhs11115.751-24B95.62
liver, neonate N20.CNhs11220.823-25A31.77
liver, neonate N25.CNhs11198.1368-26H12.15
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B119.21
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A61.84
lung, embryo E18.CNhs10583.1287-20I62.86
lung, neonate N00.CNhs11224.640-42C63.51
lung, neonate N06.CNhs11212.683-20E57.09
lung, neonate N07.CNhs11111.715-19A38.86
lung, neonate N10.CNhs11219.750-23E64.31
lung, neonate N20.CNhs11109.822-18A414.26
lung, neonate N25.CNhs11119.1359-25C720.20
lung, neonate N30.CNhs11133.1394-42H24.92
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1153.81
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1217.56
mammary gland, adult lactating day02.CNhs10480.595-22B65.90
mammary gland, adult pregnant day19.CNhs10476.588-5H29.11
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.54
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I72.27
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G66.60
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I72.35
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C31.48
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H31.39
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I14.08
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G224.95
spleen, embryo E16.CNhs11035.461-43C119.40
spleen, embryo E18.CNhs11011.1271-21F232.04
spleen, neonate N10.CNhs11116.752-24D112.24
spleen, neonate N20.CNhs11112.824-19H110.66
spleen, neonate N25.CNhs11099.1354-25G314.87
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C622.44
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C918.05
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D315.75
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A92.81
stomach, neonate N25.CNhs11104.1355-25E44.19
stomach, neonate N30.CNhs11134.1386-42I14.15
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B71.41
testis, neonate N07.CNhs11222.726-26I41.43
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I42.64
thymus, embryo E15.CNhs11005.430-45I22.98
thymus, embryo E16.CNhs11002.456-26C52.60
thymus, embryo E17.CNhs10581.478-18C11.97
thymus, embryo E18.CNhs10595.1273-19G41.59
thymus, neonate N02.CNhs11181.1541-43F81.20
thymus, neonate N03.CNhs11137.2104-43C71.33
thymus, neonate N06.CNhs11197.681-26C41.31
thymus, neonate N07.CNhs11211.713-19D31.14
thymus, neonate N10.CNhs11194.748-24E42.22
thymus, neonate N20.CNhs11186.820-7A21.66
thymus, neonate N25.CNhs11125.1362-25G72.69
thymus, neonate N30.CNhs11132.1393-42G21.99
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E42.13
uterus, adult pregnant day19.CNhs10497.590-15F52.82
uterus, adult.CNhs10509.92-27E57.33
vagina, adult.CNhs10502.89-27D55.36
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F92.51
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C62.87
whole body, neonate N06.CNhs10515.692-21D15.74
whole body, neonate N10.CNhs10518.761-6B46.96





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
common myeloid progenitor2.22e-0719

Uber anatomy
Ontology termp-valuen
musculoskeletal system6.61e-1432
hemolymphoid system9.20e-1248
immune system9.20e-1248
bone element1.36e-1022
skeletal element1.36e-1022
skeletal system1.36e-1022
hematopoietic system1.61e-1045
blood island1.61e-1045
bone marrow2.42e-1016
digestive system9.32e-08116
digestive tract9.32e-08116
primitive gut9.32e-08116
endoderm-derived structure1.14e-07118
endoderm1.14e-07118
presumptive endoderm1.14e-07118
lateral plate mesoderm1.28e-0787
subdivision of digestive tract3.06e-07114
mesoderm6.49e-07120
mesoderm-derived structure6.49e-07120
presumptive mesoderm6.49e-07120
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:154936457..154936522,%2B&oldid=4271449"