FFCP PHASE1:Mm9::chr6:140372607..140372659,+: Difference between revisions
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{{FFCP|EntrezGene=109135|HGNC=|MCL_coexpression_id=2439|UniProt=E9Q3A2,E9Q3A1,E9Q6H8,Q6ZPK1|association_with_transcript=0bp_to_ENSMUST00000032357,ENSMUST00000032358,ENSMUST00000087622,NM_144920,uc009eob.1_5end|description=CAGE_peak_1_at_Plekha5_5end|id=chr6:140372607..140372659,+|ontology_enrichment_celltype=CL:0000107!1.47e-07!9;CL:0000540!3.87e-07!33;CL:0000047!3.87e-07!33;CL:0000031!3.87e-07!33;CL:0000404!3.87e-07!33|ontology_enrichment_celltype_v019_2=CL:0000107,1.47e-07,9;CL:0000540,3.87e-07,33;CL:0000047,3.87e-07,33;CL:0000031,3.87e-07,33;CL:0000404,3.87e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!2.41e-09!333;UBERON:0000922!4.65e-08!328;UBERON:0001017!1.35e-07!73;UBERON:0005743!1.35e-07!73;UBERON:0002410!1.47e-07!9;UBERON:0003056!1.71e-07!49;UBERON:0000073!7.40e-07!75;UBERON:0001016!7.40e-07!75|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.23e-08,95;UBERON:0000924,2.23e-08,95;UBERON:0006601,2.23e-08,95;UBERON:0000922,1.24e-07,320;UBERON:0001017,1.35e-07,73;UBERON:0002346,1.42e-07,64;UBERON:0003075,1.42e-07,64;UBERON:0007284,1.42e-07,64;UBERON:0002410,1.47e-07,9;UBERON:0003056,1.71e-07,49;UBERON:0011216,3.23e-07,194;UBERON:0001016,7.39e-07,75;UBERON:0010371,7.95e-07,73|phase1_expression=8.80818659076367,2.44282785347553,7.73498706962211,17.2404600444893,14.0250804384977,17.1236857350128,17.0537227634734,4.39019299701359,8.869689495555,12.4054198950657,5.30775701499065,6.38177271962691,5.30722262786738,5.50748535239684,0.999329285446988,1.21485160433896,0.699561878128147,2.68142840554502,1.50825876966313,0.42438965179803,10.7154545590348,2.78014663362479,1.30599894569468,10.7194923271582,10.3234176480227,7.46501553349526,8.61523992318149,9.26526300549323,19.1923653650938,19.9103802510345,13.3038306393183,0.635030673459631,0,0,15.3091358468176,9.30914014007557,10.8209758819056,0,0,0,0,0,0,3.65100772129174,2.83855407414641,4.03802854755699,5.47673941043627,5.88667922227206,4.17403747195497,5.24960727500565,4.75953833526233,1.43752564364972,1.34226084846189,4.35217285206807,14.1159395639835,5.40244815675489,8.5960031981627,6.18806510732931,15.7806839470486,21.1596391708813,15.8457850876545,2.37191172448392,5.33576877666684,0.899899717281399,0.988866362566974,0.7104801149461,3.29560121570245,5.76327457982332,11.6132365785495,8.91039192989158,9.88527318351495,9.14083150092171,7.28866185140325,9.79926393719632,14.4726661237537,13.7882817991503,12.1127469099328,13.1517958227743,10.752457327937,18.2003077067668,16.6507511356386,16.6692278578163,11.725685958058,12.9435400307286,12.5294563176984,13.258286346315,13.810053037513,16.5895506784518,3.18050011999373,6.2724394888632,9.85539261585705,12.9063581547208,20.3991400112325,12.9528765993076,21.4426217757731,23.7454250161588,7.5839986871146,3.57903677413921,5.71529210126311,4.59341446863442,8.30976176682415,5.13305909657271,2.54805239706646,7.11066703153331,8.44315059943735,4.56047757855178,4.54972000513305,10.7332846935916,6.99132285847364,4.75014845007439,7.63335437770998,7.00270600117925,4.38169444786511,7.08396410597326,9.99504010653491,4.64966387919799,12.1125534189843,3.90418263683761,0.884610551949874,7.117741397686,4.41683036920787,5.81850303762267,13.0474232852686,10.8328894894272,11.1006754611131,16.860165643767,2.03685711660064,1.79970819298022,2.54140454146129,12.1330417917906,25.1625331550245,14.3245961408665,13.0368240144207,19.1786592997748,12.6750707181332,17.5220564113178,20.3678727700633,7.34001126599549,12.1306924048164,9.46988351489133,14.7036100547855,14.2539304748753,19.4467100189777,19.2902166829715,17.9616357759506,17.039124797885,16.4915035225123,16.039608985819,8.83828771024653,13.9938499324186,13.1963343122962,7.89104636739269,12.7901734643775,13.2335823278423,23.0475992776897,8.95654200683219,1.40442637462647,2.05878325691772,0.284163499395593,4.97101854085205,5.39409937956521,6.66229627405755,6.8655973319711,6.88674811115913,5.86215028972037,3.72054311600653,5.09719462659276,8.64063533517054,6.25327429671226,7.38753588355929,8.67436262140656,5.84799949701329,3.51280184465681,9.79706856950714,10.7247873767705,9.05560588937703,9.91256348951394,15.073682299822,27.9407608201156,26.2427439202296,17.7837096624489,15.7313149206207,15.5664630691409,10.4624094361908,13.7613427847908,12.1877226495768,13.5721012752146,13.7279965708394,14.0374142725766,22.4704852163555,17.5071820398502,15.1347367673319,12.5180814629034,13.8240700257772,15.7790829942313,19.3468761453049,16.8738663835834,15.7104236554314,18.6547784516559,11.8088118383682,11.303908404579,11.4759362447274,16.6013471168803,5.83957870006329,5.11053387294328,3.37293168577281,3.44862206360455,5.788251834058,9.42115651591253,13.2340223227373,8.10676133875177,11.2570179407113,8.62609239164127,10.0478055870496,6.86482880852033,15.6598904327209,13.4548060141434,16.4030797263545,8.86815312799702,11.5589761179996,15.1557428091084,14.428332290891,16.8976978767722,16.0806007144143,14.2826184531608,18.3425628986331,18.28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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=109135 | |||
|HGNC= | |||
|MCL_coexpression_id=2439 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q3A2,E9Q3A1,E9Q6H8,Q6ZPK1 | |||
|association_with_transcript=0bp_to_ENSMUST00000032357,ENSMUST00000032358,ENSMUST00000087622,NM_144920,uc009eob.1_5end | |||
|cluster_id=chr6:140372607..140372659,+ | |||
|description=CAGE_peak_1_at_Plekha5_5end | |||
|id=chr6:140372607..140372659,+ | |||
|ontology_enrichment_celltype=CL:0000107!1.47e-07!9;CL:0000540!3.87e-07!33;CL:0000047!3.87e-07!33;CL:0000031!3.87e-07!33;CL:0000404!3.87e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,1.47e-07,9;CL:0000540,3.87e-07,33;CL:0000047,3.87e-07,33;CL:0000031,3.87e-07,33;CL:0000404,3.87e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.41e-09!333;UBERON:0000922!4.65e-08!328;UBERON:0001017!1.35e-07!73;UBERON:0005743!1.35e-07!73;UBERON:0002410!1.47e-07!9;UBERON:0003056!1.71e-07!49;UBERON:0000073!7.40e-07!75;UBERON:0001016!7.40e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.23e-08,95;UBERON:0000924,2.23e-08,95;UBERON:0006601,2.23e-08,95;UBERON:0000922,1.24e-07,320;UBERON:0001017,1.35e-07,73;UBERON:0002346,1.42e-07,64;UBERON:0003075,1.42e-07,64;UBERON:0007284,1.42e-07,64;UBERON:0002410,1.47e-07,9;UBERON:0003056,1.71e-07,49;UBERON:0011216,3.23e-07,194;UBERON:0001016,7.39e-07,75;UBERON:0010371,7.95e-07,73 | |||
|phase1_expression=8.80818659076367,2.44282785347553,7.73498706962211,17.2404600444893,14.0250804384977,17.1236857350128,17.0537227634734,4.39019299701359,8.869689495555,12.4054198950657,5.30775701499065,6.38177271962691,5.30722262786738,5.50748535239684,0.999329285446988,1.21485160433896,0.699561878128147,2.68142840554502,1.50825876966313,0.42438965179803,10.7154545590348,2.78014663362479,1.30599894569468,10.7194923271582,10.3234176480227,7.46501553349526,8.61523992318149,9.26526300549323,19.1923653650938,19.9103802510345,13.3038306393183,0.635030673459631,0,0,15.3091358468176,9.30914014007557,10.8209758819056,0,0,0,0,0,0,3.65100772129174,2.83855407414641,4.03802854755699,5.47673941043627,5.88667922227206,4.17403747195497,5.24960727500565,4.75953833526233,1.43752564364972,1.34226084846189,4.35217285206807,14.1159395639835,5.40244815675489,8.5960031981627,6.18806510732931,15.7806839470486,21.1596391708813,15.8457850876545,2.37191172448392,5.33576877666684,0.899899717281399,0.988866362566974,0.7104801149461,3.29560121570245,5.76327457982332,11.6132365785495,8.91039192989158,9.88527318351495,9.14083150092171,7.28866185140325,9.79926393719632,14.4726661237537,13.7882817991503,12.1127469099328,13.1517958227743,10.752457327937,18.2003077067668,16.6507511356386,16.6692278578163,11.725685958058,12.9435400307286,12.5294563176984,13.258286346315,13.810053037513,16.5895506784518,3.18050011999373,6.2724394888632,9.85539261585705,12.9063581547208,20.3991400112325,12.9528765993076,21.4426217757731,23.7454250161588,7.5839986871146,3.57903677413921,5.71529210126311,4.59341446863442,8.30976176682415,5.13305909657271,2.54805239706646,7.11066703153331,8.44315059943735,4.56047757855178,4.54972000513305,10.7332846935916,6.99132285847364,4.75014845007439,7.63335437770998,7.00270600117925,4.38169444786511,7.08396410597326,9.99504010653491,4.64966387919799,12.1125534189843,3.90418263683761,0.884610551949874,7.117741397686,4.41683036920787,5.81850303762267,13.0474232852686,10.8328894894272,11.1006754611131,16.860165643767,2.03685711660064,1.79970819298022,2.54140454146129,12.1330417917906,25.1625331550245,14.3245961408665,13.0368240144207,19.1786592997748,12.6750707181332,17.5220564113178,20.3678727700633,7.34001126599549,12.1306924048164,9.46988351489133,14.7036100547855,14.2539304748753,19.4467100189777,19.2902166829715,17.9616357759506,17.039124797885,16.4915035225123,16.039608985819,8.83828771024653,13.9938499324186,13.1963343122962,7.89104636739269,12.7901734643775,13.2335823278423,23.0475992776897,8.95654200683219,1.40442637462647,2.05878325691772,0.284163499395593,4.97101854085205,5.39409937956521,6.66229627405755,6.8655973319711,6.88674811115913,5.86215028972037,3.72054311600653,5.09719462659276,8.64063533517054,6.25327429671226,7.38753588355929,8.67436262140656,5.84799949701329,3.51280184465681,9.79706856950714,10.7247873767705,9.05560588937703,9.91256348951394,15.073682299822,27.9407608201156,26.2427439202296,17.7837096624489,15.7313149206207,15.5664630691409,10.4624094361908,13.7613427847908,12.1877226495768,13.5721012752146,13.7279965708394,14.0374142725766,22.4704852163555,17.5071820398502,15.1347367673319,12.5180814629034,13.8240700257772,15.7790829942313,19.3468761453049,16.8738663835834,15.7104236554314,18.6547784516559,11.8088118383682,11.303908404579,11.4759362447274,16.6013471168803,5.83957870006329,5.11053387294328,3.37293168577281,3.44862206360455,5.788251834058,9.42115651591253,13.2340223227373,8.10676133875177,11.2570179407113,8.62609239164127,10.0478055870496,6.86482880852033,15.6598904327209,13.4548060141434,16.4030797263545,8.86815312799702,11.5589761179996,15.1557428091084,14.428332290891,16.8976978767722,16.0806007144143,14.2826184531608,18.3425628986331,18.2856767163182,11.5161638617363,11.799652880654,10.9788420859544,11.2245238212832,9.69148692496127,0,1.08781136763742,3.93411418415229,4.96686143348518,7.38532713943843,9.84578167374507,3.44263385291018,4.29200576247434,41.3315767435296,43.7291393612235,53.2095792400013,43.2533524294119,44.3369361423964,54.067617380667,46.148419990938,47.3454489816325,68.7800733626951,25.3843839973228,14.1940085208269,11.3961986347043,16.4515828947112,21.2811458634571,5.30980553359851,7.04063844849446,5.44182402536552,5.09233715340925,6.496641643377,9.22305443831782,9.8202751403924,7.99774204850512,9.62542921638748,9.7971394960103,8.4334886859999,15.470331487228,17.3624198934432,12.6042765821917,9.70190128370659,16.7182887324642,14.5418991586664,11.7723419617367,11.8475294833527,13.700922710157,11.9682571112492,23.0896957241564,12.3495902910779,19.6214641000361,24.0581995776899,10.4944489374991,9.90790455226033,8.53532678674319,16.9058885245313,9.27126510052548,2.73393409276564,4.95328483111734,2.40752885580625,2.63715839806567,1.50363650493128,1.37266903923914,5.77926661979108,6.85762116385924,5.94259887359022,7.63736494412091,19.2964956084493,18.0954325742895,17.928886576419,17.3543285692009,15.5037420259786,20.0947876113383,20.8286708427847,14.6583327511057,19.7014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| |||
|short_description=p1@Plekha5 | |||
}} |
Latest revision as of 21:06, 26 September 2015
Short description: | p1@Plekha5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Plekha5_5end |
Coexpression cluster: | MCL_coexpression_mm9:2439 |
Association with transcript: | 0bp_to_ENSMUST00000032357, ENSMUST00000032358, ENSMUST00000087622, NM_144920, uc009eob.1_5end |
EntrezGene: | Plekha5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 1.47e-07 | 9 |
neuron | 3.87e-07 | 33 |
neuronal stem cell | 3.87e-07 | 33 |
neuroblast | 3.87e-07 | 33 |
electrically signaling cell | 3.87e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 2.23e-08 | 95 |
ectoderm | 2.23e-08 | 95 |
presumptive ectoderm | 2.23e-08 | 95 |
embryo | 1.24e-07 | 320 |
central nervous system | 1.35e-07 | 73 |
neurectoderm | 1.42e-07 | 64 |
neural plate | 1.42e-07 | 64 |
presumptive neural plate | 1.42e-07 | 64 |
autonomic nervous system | 1.47e-07 | 9 |
pre-chordal neural plate | 1.71e-07 | 49 |
organ system subdivision | 3.23e-07 | 194 |
nervous system | 7.39e-07 | 75 |
ecto-epithelium | 7.95e-07 | 73 |