FFCP PHASE1:Mm9::chr4:43505923..43505937,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr4:43505923..43505937,- to FFCP PHASE1:Mm9::chr4:43505923..43505937,-: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=19782 | |EntrezGene=19782 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=255 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000157463,NR_001460,uc008spx.1_5end | |||
|cluster_id=chr4:43505923..43505937,- | |||
|description=CAGE_peak_1_at_Rmrp_5end | |||
|id=chr4:43505923..43505937,- | |||
|ontology_enrichment_celltype=CL:0000548!5.63e-28!115;CL:0000004!5.63e-28!115;CL:0000255!5.63e-28!115;CL:0002371!3.73e-27!118;CL:0000144!3.36e-26!121;CL:0000012!3.36e-26!121;CL:0000723!1.84e-21!91;CL:0000048!1.84e-21!91;CL:0000034!6.71e-21!97;CL:0000063!5.62e-15!66;CL:0002321!1.48e-14!70;CL:0000220!1.48e-14!70;CL:0000219!5.97e-14!54;CL:0002320!2.59e-12!46;CL:0000134!2.59e-12!46;CL:0002319!1.08e-10!43;CL:0000055!1.38e-10!50;CL:0000221!4.21e-10!44;CL:0000133!4.21e-10!44;CL:0000540!3.75e-08!33;CL:0000047!3.75e-08!33;CL:0000031!3.75e-08!33;CL:0000404!3.75e-08!33;CL:0000393!8.27e-08!39;CL:0000211!8.27e-08!39;CL:0000988!8.65e-08!32;CL:0002032!8.65e-08!32;CL:0000037!8.65e-08!32;CL:0000566!8.65e-08!32;CL:0000837!8.65e-08!32;CL:0002031!3.23e-07!25;CL:0000763!7.98e-07!16;CL:0000049!8.61e-07!19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,1.84e-21,91;CL:0000048,1.84e-21,91;CL:0000034,6.71e-21,97;CL:0002321,1.48e-14,70;CL:0000219,5.97e-14,54;CL:0002320,2.59e-12,46;CL:0000134,2.59e-12,46;CL:0002319,1.08e-10,43;CL:0000221,4.21e-10,44;CL:0000133,4.21e-10,44;CL:0000540,3.75e-08,33;CL:0000047,3.75e-08,33;CL:0000031,3.75e-08,33;CL:0000404,3.75e-08,33;CL:0000393,8.27e-08,39;CL:0000211,8.27e-08,39;CL:0000988,8.65e-08,32;CL:0002032,8.65e-08,32;CL:0000037,8.65e-08,32;CL:0000837,8.65e-08,32;CL:0002031,3.23e-07,25;CL:0000763,7.98e-07,16;CL:0000049,8.61e-07,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.59e-12!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.59e-12,46 | |||
|phase1_expression=7.52699581392532,36.2934423944936,35.0349414329943,41.1351327377289,49.087781534742,31.7291823913472,23.3612640595526,34.734174005784,45.3339685328367,68.1127771597001,24.3129514880217,24.4102806525729,38.3489635045901,45.1089276482027,76.9483549794181,36.040597595389,22.3859801001007,23.9751245672261,30.5765186940797,62.8096684661085,14.7975324862861,21.2482635569895,24.291580389921,8.47959840805055,19.4997888907094,70.6305315861475,29.7225777349762,16.8067561494993,33.8241686632346,24.4469225867133,32.5943850663298,485.798465196618,399.177047142386,649.774892163299,86.3666343056311,71.4808975041517,79.8302182985863,12.5559489221072,30.4720784364282,14.1351410872926,13.5293242247133,11.6117732442936,14.0798002379035,13.5968563413623,14.6996550268296,19.2724089769766,173.690878445265,72.8204022310691,67.4436580994828,49.1907644657937,114.08893362467,103.50184634278,13.9259563027921,33.3666585325218,17.4768775554081,29.070316272062,34.6705462325896,44.8634720281375,58.6717736492834,40.7323054039465,64.6508031576303,127.744388590063,136.951398601115,73.7917768170747,162.174083460984,123.623540000621,65.912024314049,88.7544285292791,49.9783931326862,78.4384501707123,86.8642090381208,24.8516356431309,31.1424642741775,59.0405652216078,36.9963518130392,93.7603162342221,24.2254938198655,10.5980490610706,16.1286859919056,52.2269699411568,24.0612502674337,67.197824801822,29.5933978941464,43.895483582471,23.3781319098519,33.2930301585245,20.6438937158699,42.6854730939938,11.2074766133112,8.61515785217355,13.0439019915755,35.2773789562368,32.638624017972,59.9070542717977,113.061096635894,47.4908500323176,12.7804422319894,19.2586264513205,45.7223368101049,37.8073344726064,12.6759077799012,52.6138557398703,22.9324715735981,7.11066703153331,49.1434663095456,40.0308587450656,56.1132133966409,13.245330047411,8.54495016035667,7.86743337043571,37.2993452547192,46.2787527034455,38.2821725445057,38.735718622024,12.6995803706561,11.1843266283411,10.8765785803125,6.36237170447611,10.6153266233985,15.8531512948461,13.2504911076236,19.8798853785441,13.0474232852686,6.73395833126558,14.8707161837553,15.0719662573069,21.8063526600775,68.9888140642419,16.1379188382792,6.44099749440738,15.5550204958333,16.5863744788981,6.60532416730651,4.34716277461562,7.2725815595846,7.46309810111685,30.5518091550949,12.9383249434497,13.8997517138521,6.52369753248069,30.7084245391981,69.2005334344753,21.7875177064473,26.5240479390859,13.6072998302656,17.039124797885,23.7065363136114,12.4177617954728,17.2454394346274,12.6701073712439,18.1229657888867,30.9065982722881,44.2095126268701,10.447564995665,19.5493029587546,51.5498751059897,35.1106593656617,23.6760074545538,32.3946389310976,16.9843133479112,18.7620847984877,28.6298677723014,13.2577051927718,23.4149435779411,19.4376562238097,19.3003174142839,18.5108646965737,10.9759421825139,15.3040660419537,14.7750717671186,6.16122952548504,8.77199924551994,8.12335426576887,7.38135303182045,12.4071069652835,13.6863134464448,9.91256348951394,15.3381328664856,27.3008960685099,45.2861510127855,13.1444810548535,14.3195302482573,13.1203045868473,17.690983228468,28.9462727542152,24.8695421633256,12.5667604400135,10.7436494902221,8.77338392036041,24.268124033664,15.9942156907274,13.1433240347882,54.4346875735344,29.47611625331,13.5249282807697,25.4564159806643,24.2440608959532,15.850695295212,9.80166325425988,6.05201606716369,5.96595165797224,9.00799296629144,8.59712618552732,10.8449318715461,11.2038627214526,8.7696223830093,9.73728582664814,14.470629585145,25.462585178142,18.9879450717535,12.4844124616777,16.1991233780968,56.0696005456683,3.72140947668503,11.2333562321242,11.6186283855671,7.71408878144222,8.68398338454061,16.2582807346612,52.6786124721948,12.2223732331519,27.8381940671309,27.4587590497547,12.3954630506944,15.7108802984769,26.5381761086606,11.6650006638581,11.9590932410338,17.8589340896386,17.6972379892997,10.1884139300878,14.3202567995696,87.4589446847779,68.5321161611574,7.86822836830458,16.0043312856745,9.31193421929193,5.97779601620236,14.7541450839008,12.3710754330143,55.5294466172612,57.3944954116059,40.715022171499,54.2459171352293,47.4561175795499,57.464535750133,58.6975517428597,52.0215427082135,36.7617633490267,6.74774764485795,12.2068473279111,49.1461066121624,28.1794439681687,13.6925202067204,18.5843193675948,56.5678882241107,35.6741797218406,25.0844756075344,25.986566573508,15.9866276930842,11.8877014857382,15.2684166380552,16.0423820273125,10.1131762539461,23.1920938864997,22.6898195146011,7.83011093233712,37.6327686525438,60.4105053265463,50.1548661973926,22.699549906211,61.7156108903164,25.0114511315224,66.9822888052118,14.3149741918863,21.183207086382,9.04166432025344,12.8611277294354,10.8181165886257,6.75504759195346,10.9822556482886,7.05805868903763,13.1166376483433,4.82105785227325,19.6501512917531,33.434672610042,18.5194527369712,15.0694765603753,10.1153728513559,15.328137604837,16.8278645693917,15.1147568509551,14.3727972756601,0,21.6690155603078,16.468876837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| |phase1_expression=7.52699581392532,36.2934423944936,35.0349414329943,41.1351327377289,49.087781534742,31.7291823913472,23.3612640595526,34.734174005784,45.3339685328367,68.1127771597001,24.3129514880217,24.4102806525729,38.3489635045901,45.1089276482027,76.9483549794181,36.040597595389,22.3859801001007,23.9751245672261,30.5765186940797,62.8096684661085,14.7975324862861,21.2482635569895,24.291580389921,8.47959840805055,19.4997888907094,70.6305315861475,29.7225777349762,16.8067561494993,33.8241686632346,24.4469225867133,32.5943850663298,485.798465196618,399.177047142386,649.774892163299,86.3666343056311,71.4808975041517,79.8302182985863,12.5559489221072,30.4720784364282,14.1351410872926,13.5293242247133,11.6117732442936,14.0798002379035,13.5968563413623,14.6996550268296,19.2724089769766,173.690878445265,72.8204022310691,67.4436580994828,49.1907644657937,114.08893362467,103.50184634278,13.9259563027921,33.3666585325218,17.4768775554081,29.070316272062,34.6705462325896,44.8634720281375,58.6717736492834,40.7323054039465,64.6508031576303,127.744388590063,136.951398601115,73.7917768170747,162.174083460984,123.623540000621,65.912024314049,88.7544285292791,49.9783931326862,78.4384501707123,86.8642090381208,24.8516356431309,31.1424642741775,59.0405652216078,36.9963518130392,93.7603162342221,24.2254938198655,10.5980490610706,16.1286859919056,52.2269699411568,24.0612502674337,67.197824801822,29.5933978941464,43.895483582471,23.3781319098519,33.2930301585245,20.6438937158699,42.6854730939938,11.2074766133112,8.61515785217355,13.0439019915755,35.2773789562368,32.638624017972,59.9070542717977,113.061096635894,47.4908500323176,12.7804422319894,19.2586264513205,45.7223368101049,37.8073344726064,12.6759077799012,52.6138557398703,22.9324715735981,7.11066703153331,49.1434663095456,40.0308587450656,56.1132133966409,13.245330047411,8.54495016035667,7.86743337043571,37.2993452547192,46.2787527034455,38.2821725445057,38.735718622024,12.6995803706561,11.1843266283411,10.8765785803125,6.36237170447611,10.6153266233985,15.8531512948461,13.2504911076236,19.8798853785441,13.0474232852686,6.73395833126558,14.8707161837553,15.0719662573069,21.8063526600775,68.9888140642419,16.1379188382792,6.44099749440738,15.5550204958333,16.5863744788981,6.60532416730651,4.34716277461562,7.2725815595846,7.46309810111685,30.5518091550949,12.9383249434497,13.8997517138521,6.52369753248069,30.7084245391981,69.2005334344753,21.7875177064473,26.5240479390859,13.6072998302656,17.039124797885,23.7065363136114,12.4177617954728,17.2454394346274,12.6701073712439,18.1229657888867,30.9065982722881,44.2095126268701,10.447564995665,19.5493029587546,51.5498751059897,35.1106593656617,23.6760074545538,32.3946389310976,16.9843133479112,18.7620847984877,28.6298677723014,13.2577051927718,23.4149435779411,19.4376562238097,19.3003174142839,18.5108646965737,10.9759421825139,15.3040660419537,14.7750717671186,6.16122952548504,8.77199924551994,8.12335426576887,7.38135303182045,12.4071069652835,13.6863134464448,9.91256348951394,15.3381328664856,27.3008960685099,45.2861510127855,13.1444810548535,14.3195302482573,13.1203045868473,17.690983228468,28.9462727542152,24.8695421633256,12.5667604400135,10.7436494902221,8.77338392036041,24.268124033664,15.9942156907274,13.1433240347882,54.4346875735344,29.47611625331,13.5249282807697,25.4564159806643,24.2440608959532,15.850695295212,9.80166325425988,6.05201606716369,5.96595165797224,9.00799296629144,8.59712618552732,10.8449318715461,11.2038627214526,8.7696223830093,9.73728582664814,14.470629585145,25.462585178142,18.9879450717535,12.4844124616777,16.1991233780968,56.0696005456683,3.72140947668503,11.2333562321242,11.6186283855671,7.71408878144222,8.68398338454061,16.2582807346612,52.6786124721948,12.2223732331519,27.8381940671309,27.4587590497547,12.3954630506944,15.7108802984769,26.5381761086606,11.6650006638581,11.9590932410338,17.8589340896386,17.6972379892997,10.1884139300878,14.3202567995696,87.4589446847779,68.5321161611574,7.86822836830458,16.0043312856745,9.31193421929193,5.97779601620236,14.7541450839008,12.3710754330143,55.5294466172612,57.3944954116059,40.715022171499,54.2459171352293,47.4561175795499,57.464535750133,58.6975517428597,52.0215427082135,36.7617633490267,6.74774764485795,12.2068473279111,49.1461066121624,28.1794439681687,13.6925202067204,18.5843193675948,56.5678882241107,35.6741797218406,25.0844756075344,25.986566573508,15.9866276930842,11.8877014857382,15.2684166380552,16.0423820273125,10.1131762539461,23.1920938864997,22.6898195146011,7.83011093233712,37.6327686525438,60.4105053265463,50.1548661973926,22.699549906211,61.7156108903164,25.0114511315224,66.9822888052118,14.3149741918863,21.183207086382,9.04166432025344,12.8611277294354,10.8181165886257,6.75504759195346,10.9822556482886,7.05805868903763,13.1166376483433,4.82105785227325,19.6501512917531,33.434672610042,18.5194527369712,15.0694765603753,10.1153728513559,15.328137604837,16.8278645693917,15.1147568509551,14.3727972756601,0,21.6690155603078,16.468876837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| ||
|short_description=p1@Rmrp | |||
}} | }} |
Latest revision as of 00:10, 27 September 2015
Short description: | p1@Rmrp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rmrp_5end |
Coexpression cluster: | MCL_coexpression_mm9:255 |
Association with transcript: | 0bp_to_ENSMUST00000157463, NR_001460, uc008spx.1_5end |
EntrezGene: | Rmrp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 1.84e-21 | 91 |
multi fate stem cell | 1.84e-21 | 91 |
stem cell | 6.71e-21 | 97 |
embryonic cell | 1.48e-14 | 70 |
motile cell | 5.97e-14 | 54 |
connective tissue cell | 2.59e-12 | 46 |
mesenchymal cell | 2.59e-12 | 46 |
neural cell | 1.08e-10 | 43 |
ectodermal cell | 4.21e-10 | 44 |
neurectodermal cell | 4.21e-10 | 44 |
neuron | 3.75e-08 | 33 |
neuronal stem cell | 3.75e-08 | 33 |
neuroblast | 3.75e-08 | 33 |
electrically signaling cell | 3.75e-08 | 33 |
electrically responsive cell | 8.27e-08 | 39 |
electrically active cell | 8.27e-08 | 39 |
hematopoietic cell | 8.65e-08 | 32 |
hematopoietic oligopotent progenitor cell | 8.65e-08 | 32 |
hematopoietic stem cell | 8.65e-08 | 32 |
hematopoietic multipotent progenitor cell | 8.65e-08 | 32 |
hematopoietic lineage restricted progenitor cell | 3.23e-07 | 25 |
myeloid cell | 7.98e-07 | 16 |
common myeloid progenitor | 8.61e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.59e-12 | 46 |