FFCP PHASE1:Mm9::chr4:43505923..43505937,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19782 | |EntrezGene=19782 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=255 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000157463,NR_001460,uc008spx.1_5end | |association_with_transcript=0bp_to_ENSMUST00000157463,NR_001460,uc008spx.1_5end | ||
|cluster_id=chr4:43505923..43505937,- | |||
|description=CAGE_peak_1_at_Rmrp_5end | |description=CAGE_peak_1_at_Rmrp_5end | ||
|id=chr4:43505923..43505937,- | |id=chr4:43505923..43505937,- | ||
|ontology_enrichment_celltype=CL:0000548!5.63e-28!115;CL:0000004!5.63e-28!115;CL:0000255!5.63e-28!115;CL:0002371!3.73e-27!118;CL:0000144!3.36e-26!121;CL:0000012!3.36e-26!121;CL:0000723!1.84e-21!91;CL:0000048!1.84e-21!91;CL:0000034!6.71e-21!97;CL:0000063!5.62e-15!66;CL:0002321!1.48e-14!70;CL:0000220!1.48e-14!70;CL:0000219!5.97e-14!54;CL:0002320!2.59e-12!46;CL:0000134!2.59e-12!46;CL:0002319!1.08e-10!43;CL:0000055!1.38e-10!50;CL:0000221!4.21e-10!44;CL:0000133!4.21e-10!44;CL:0000540!3.75e-08!33;CL:0000047!3.75e-08!33;CL:0000031!3.75e-08!33;CL:0000404!3.75e-08!33;CL:0000393!8.27e-08!39;CL:0000211!8.27e-08!39;CL:0000988!8.65e-08!32;CL:0002032!8.65e-08!32;CL:0000037!8.65e-08!32;CL:0000566!8.65e-08!32;CL:0000837!8.65e-08!32;CL:0002031!3.23e-07!25;CL:0000763!7.98e-07!16;CL:0000049!8.61e-07!19 | |ontology_enrichment_celltype=CL:0000548!5.63e-28!115;CL:0000004!5.63e-28!115;CL:0000255!5.63e-28!115;CL:0002371!3.73e-27!118;CL:0000144!3.36e-26!121;CL:0000012!3.36e-26!121;CL:0000723!1.84e-21!91;CL:0000048!1.84e-21!91;CL:0000034!6.71e-21!97;CL:0000063!5.62e-15!66;CL:0002321!1.48e-14!70;CL:0000220!1.48e-14!70;CL:0000219!5.97e-14!54;CL:0002320!2.59e-12!46;CL:0000134!2.59e-12!46;CL:0002319!1.08e-10!43;CL:0000055!1.38e-10!50;CL:0000221!4.21e-10!44;CL:0000133!4.21e-10!44;CL:0000540!3.75e-08!33;CL:0000047!3.75e-08!33;CL:0000031!3.75e-08!33;CL:0000404!3.75e-08!33;CL:0000393!8.27e-08!39;CL:0000211!8.27e-08!39;CL:0000988!8.65e-08!32;CL:0002032!8.65e-08!32;CL:0000037!8.65e-08!32;CL:0000566!8.65e-08!32;CL:0000837!8.65e-08!32;CL:0002031!3.23e-07!25;CL:0000763!7.98e-07!16;CL:0000049!8.61e-07!19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000723,1.84e-21,91;CL:0000048,1.84e-21,91;CL:0000034,6.71e-21,97;CL:0002321,1.48e-14,70;CL:0000219,5.97e-14,54;CL:0002320,2.59e-12,46;CL:0000134,2.59e-12,46;CL:0002319,1.08e-10,43;CL:0000221,4.21e-10,44;CL:0000133,4.21e-10,44;CL:0000540,3.75e-08,33;CL:0000047,3.75e-08,33;CL:0000031,3.75e-08,33;CL:0000404,3.75e-08,33;CL:0000393,8.27e-08,39;CL:0000211,8.27e-08,39;CL:0000988,8.65e-08,32;CL:0002032,8.65e-08,32;CL:0000037,8.65e-08,32;CL:0000837,8.65e-08,32;CL:0002031,3.23e-07,25;CL:0000763,7.98e-07,16;CL:0000049,8.61e-07,19 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.59e-12!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.59e-12,46 | |||
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| ||
|short_description=p1@Rmrp | |short_description=p1@Rmrp | ||
}} | }} |
Latest revision as of 00:10, 27 September 2015
Short description: | p1@Rmrp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rmrp_5end |
Coexpression cluster: | MCL_coexpression_mm9:255 |
Association with transcript: | 0bp_to_ENSMUST00000157463, NR_001460, uc008spx.1_5end |
EntrezGene: | Rmrp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 1.84e-21 | 91 |
multi fate stem cell | 1.84e-21 | 91 |
stem cell | 6.71e-21 | 97 |
embryonic cell | 1.48e-14 | 70 |
motile cell | 5.97e-14 | 54 |
connective tissue cell | 2.59e-12 | 46 |
mesenchymal cell | 2.59e-12 | 46 |
neural cell | 1.08e-10 | 43 |
ectodermal cell | 4.21e-10 | 44 |
neurectodermal cell | 4.21e-10 | 44 |
neuron | 3.75e-08 | 33 |
neuronal stem cell | 3.75e-08 | 33 |
neuroblast | 3.75e-08 | 33 |
electrically signaling cell | 3.75e-08 | 33 |
electrically responsive cell | 8.27e-08 | 39 |
electrically active cell | 8.27e-08 | 39 |
hematopoietic cell | 8.65e-08 | 32 |
hematopoietic oligopotent progenitor cell | 8.65e-08 | 32 |
hematopoietic stem cell | 8.65e-08 | 32 |
hematopoietic multipotent progenitor cell | 8.65e-08 | 32 |
hematopoietic lineage restricted progenitor cell | 3.23e-07 | 25 |
myeloid cell | 7.98e-07 | 16 |
common myeloid progenitor | 8.61e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.59e-12 | 46 |