FFCP PHASE1:Mm9::chr4:47004694..47004703,-: Difference between revisions
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|id=chr4:47004694..47004703,-
|short_description=p8@Gabbr2
|description=CAGE_peak_8_at_Gabbr2_5end
|association_with_transcript=41bp_to_ENSMUST00000107749_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=242425 | |EntrezGene=242425 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=168 | |||
|TSSclassifier=NA | |||
|UniProt=Q80T41 | |UniProt=Q80T41 | ||
|association_with_transcript=41bp_to_ENSMUST00000107749_5end | |||
|cluster_id=chr4:47004694..47004703,- | |||
|description=CAGE_peak_8_at_Gabbr2_5end | |||
|id=chr4:47004694..47004703,- | |||
|ontology_enrichment_celltype=CL:0000117!4.94e-12!23;CL:0000337!4.94e-12!23;CL:0000540!2.78e-07!33;CL:0000047!2.78e-07!33;CL:0000031!2.78e-07!33;CL:0000404!2.78e-07!33;CL:0002610!9.95e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,8.86e-38,3;CL:0000117,3.76e-09,23;CL:0000337,3.76e-09,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.87e-28!52;UBERON:0005068!1.87e-28!52;UBERON:0006241!1.87e-28!52;UBERON:0007135!1.87e-28!52;UBERON:0002616!5.63e-25!49;UBERON:0000955!2.66e-24!50;UBERON:0006238!2.66e-24!50;UBERON:0000073!6.61e-23!75;UBERON:0001016!6.61e-23!75;UBERON:0002346!1.65e-22!71;UBERON:0003075!1.65e-22!71;UBERON:0007284!1.65e-22!71;UBERON:0001017!1.79e-22!73;UBERON:0005743!1.79e-22!73;UBERON:0000033!8.62e-22!63;UBERON:0002020!2.50e-21!34;UBERON:0004121!1.60e-18!102;UBERON:0000924!1.60e-18!102;UBERON:0006601!1.60e-18!102;UBERON:0003080!5.16e-17!40;UBERON:0003056!9.16e-17!49;UBERON:0002780!8.87e-16!39;UBERON:0001890!8.87e-16!39;UBERON:0006240!8.87e-16!39;UBERON:0002791!5.67e-15!29;UBERON:0003528!5.67e-15!29;UBERON:0001893!5.67e-15!29;UBERON:0007811!1.64e-13!86;UBERON:0003076!7.81e-13!12;UBERON:0003057!7.81e-13!12;UBERON:0000153!1.32e-11!94;UBERON:0000025!1.73e-10!114;UBERON:0002420!3.17e-10!8;UBERON:0007245!3.17e-10!8;UBERON:0010009!3.17e-10!8;UBERON:0010011!3.17e-10!8;UBERON:0000454!3.17e-10!8;UBERON:0002240!4.01e-10!6;UBERON:0005174!4.01e-10!6;UBERON:0001137!4.01e-10!6;UBERON:0002298!4.82e-10!6;UBERON:0004111!3.45e-09!122;UBERON:0001948!1.21e-08!5;UBERON:0002315!1.21e-08!5;UBERON:0002021!3.23e-08!10;UBERON:0000411!3.23e-08!10;UBERON:0001950!3.23e-08!10;UBERON:0002619!3.29e-08!17;UBERON:0002950!8.64e-08!4;UBERON:0001891!8.64e-08!4;UBERON:0009616!8.64e-08!4;UBERON:0000956!1.76e-07!21;UBERON:0001869!1.76e-07!21;UBERON:0000203!1.76e-07!21;UBERON:0004684!9.95e-07!3;UBERON:0002275!9.95e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,8.86e-38,3;UBERON:0002275,8.86e-38,3;UBERON:0002037,1.01e-13,4;UBERON:0002680,1.01e-13,4;UBERON:0001895,1.01e-13,4;UBERON:0010092,1.01e-13,4;UBERON:0006215,1.01e-13,4;UBERON:0000073,1.59e-11,54;UBERON:0003076,3.36e-10,12;UBERON:0003057,3.36e-10,12;UBERON:0004733,1.78e-09,6;UBERON:0004732,1.78e-09,6;UBERON:0002028,1.78e-09,6;UBERON:0007277,1.78e-09,6;UBERON:0001017,1.47e-08,73;UBERON:0001016,2.47e-08,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.856952953211411,0.441737081903227,0.122490799214954,0,0,1.10115880999389,2.042997409363,1.38245879930619,0.395658863190582,0.457438218012048,0,0.837548997004143,0.56276261003168,0.61119299110724,0.294628585473668,1.42371680799103,0.186399445825301,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75668478206928,5.23616767033638,0,0,0,0,0.599162557619291,0.457500602818626,0.502617408451458,0.173824320192276,0.255715457330331,1.0389402227978,0.324482526135515,0,0,0,0,0,0,0,0.150704817835715,0.272145996605311,0,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0.859265911718438,0,0,0.675022500231806,0.45032120322422,0.906284817968409,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0,0,0.271608227691724,0,0.118635018124174,0,0,0,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.856952953211411,0.441737081903227,0.122490799214954,0,0,1.10115880999389,2.042997409363,1.38245879930619,0.395658863190582,0.457438218012048,0,0.837548997004143,0.56276261003168,0.61119299110724,0.294628585473668,1.42371680799103,0.186399445825301,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75668478206928,5.23616767033638,0,0,0,0,0.599162557619291,0.457500602818626,0.502617408451458,0.173824320192276,0.255715457330331,1.0389402227978,0.324482526135515,0,0,0,0,0,0,0,0.150704817835715,0.272145996605311,0,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0.859265911718438,0,0,0.675022500231806,0.45032120322422,0.906284817968409,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0,0,0.271608227691724,0,0.118635018124174,0,0,0,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p8@Gabbr2 | |||
}} | }} |
Latest revision as of 01:30, 27 September 2015
Short description: | p8@Gabbr2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Gabbr2_5end |
Coexpression cluster: | MCL_coexpression_mm9:168 |
Association with transcript: | 41bp_to_ENSMUST00000107749_5end |
EntrezGene: | Gabbr2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 8.86e-38 | 3 |
CNS neuron (sensu Vertebrata) | 3.76e-09 | 23 |
neuroblast (sensu Vertebrata) | 3.76e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 8.86e-38 | 3 |
reticular formation | 8.86e-38 | 3 |
cerebellum | 1.01e-13 | 4 |
regional part of metencephalon | 1.01e-13 | 4 |
metencephalon | 1.01e-13 | 4 |
future metencephalon | 1.01e-13 | 4 |
rhombic lip | 1.01e-13 | 4 |
regional part of nervous system | 1.59e-11 | 54 |
posterior neural tube | 3.36e-10 | 12 |
chordal neural plate | 3.36e-10 | 12 |
segmental subdivision of hindbrain | 1.78e-09 | 6 |
segmental subdivision of nervous system | 1.78e-09 | 6 |
hindbrain | 1.78e-09 | 6 |
presumptive hindbrain | 1.78e-09 | 6 |
central nervous system | 1.47e-08 | 73 |
nervous system | 2.47e-08 | 75 |